RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 SUMF2Q8NBJ7 301 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 OR56B2PQ8NGI1 322 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 OR5A2Q8NGI9 324 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 OR5D13Q8NGL4 314 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 LRRC29Q8WV35 223 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 PIGCQ92535 297 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 LSM10Q969L4 123 aaKnown RBP3.18□□□□□ -1.9
ATXN3-240ENST00000556339 SLAMF9Q96A28 289 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 PINX1Q96BK5 328 aaKnown RBP3.18□□□□□ -1.9
ATXN3-240ENST00000556339 SPACA5Q96QH8 159 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 RAB40CQ96S21 281 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 PSMG3Q9BT73 122 aaPredicted RBP3.18□□□□□ -1.9
ATXN3-240ENST00000556339 FAAP24Q9BTP7 215 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 CTDSP1Q9GZU7 261 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 EIF5A2Q9GZV4 153 aaKnown RBP3.18□□□□□ -1.9
ATXN3-240ENST00000556339 C1RLQ9NZP8 487 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 ZMAT5Q9UDW3 170 aaKnown RBP3.18□□□□□ -1.9
ATXN3-240ENST00000556339 ST3GAL6Q9Y274 331 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 LSM5Q9Y4Y9 91 aaKnown RBP3.18□□□□□ -1.9
ATXN3-240ENST00000556339 WSB1Q9Y6I7 421 aa3.18□□□□□ -1.9
ATXN3-240ENST00000556339 TET2Q6N021 2002 aaPredicted RBP3.17□□□□□ -1.9
ATXN3-240ENST00000556339 A0A0U1RQK1 487 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 A0A1W2PP11 408 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 NKX6-3A6NJ46 265 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 OR5B21A6NL26 309 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 SEC14L6B5MCN3 397 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 M0R036 132 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 CDIPTO14735 213 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 DEGS1O15121 323 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 EIF3GO75821 320 aaKnown RBP eCLIP3.17□□□□□ -1.9
ATXN3-240ENST00000556339 NDUFA7O95182 113 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 OR2C1O95371 312 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 FSTL3O95633 263 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 SCGB1D2O95969 90 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 NAPSAO96009 420 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 IFNA1P01562 189 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 IFNA5P01569 189 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 IGHV4-59P01825 116 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 MBP02144 154 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 FBP1P09467 338 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 ACKR3P25106 362 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 GNRHRP30968 328 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 RPL35P42766 123 aaKnown RBP3.17□□□□□ -1.9
ATXN3-240ENST00000556339 IER3P46695 156 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 CDX1P47902 265 aaPredicted RBP3.17□□□□□ -1.9
ATXN3-240ENST00000556339 SULT1A1P50225 295 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 PPT1P50897 306 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 ARHGDIBP52566 201 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 AKR1C2P52895 323 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 HBG1P69891 147 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 HBG2P69892 147 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 PAX2Q02962 417 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 AKR1C1Q04828 323 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 ZNF616Q08AN1 781 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 SSX2Q16385 188 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 ATP6V1FQ16864 119 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 SNAI3Q3KNW1 292 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 NMSQ5H8A3 153 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 AKR1C8PQ5T2L2 129 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 ZNF880Q6PDB4 577 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 HEPN1Q6WQI6 88 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 ZNF841Q6ZN19 808 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 LYZL2Q7Z4W2 148 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 VMO1Q7Z5L0 202 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 CENPVQ7Z7K6 275 aaPredicted RBP3.17□□□□□ -1.9
ATXN3-240ENST00000556339 STX12Q86Y82 276 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 ZNF573Q86YE8 665 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 FAM219AQ8IW50 185 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 SELENOHQ8IZQ5 122 aaKnown RBP3.17□□□□□ -1.9
ATXN3-240ENST00000556339 TMEM86BQ8N661 226 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 TMEM252Q8N6L7 170 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 OR2G3Q8NGZ4 309 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 OR8U1Q8NH10 309 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 NPRL2Q8WTW4 380 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 SECTM1Q8WVN6 248 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 HPSE2Q8WWQ2 592 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 MBD3L1Q8WWY6 194 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 DYRK2Q92630 601 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 TVP23CQ96ET8 276 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 YPEL4Q96NS1 127 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 CLCC1Q96S66 551 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 TBX15Q96SF7 602 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 ATP5SQ99766 215 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 NKX3-1Q99801 234 aaPredicted RBP3.17□□□□□ -1.9
ATXN3-240ENST00000556339 NIPSNAP3BQ9BS92 247 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 RTL8AQ9BWD3 113 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 PKIBQ9C010 78 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 Q9N2K0 584 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 GPR173Q9NS66 373 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 RPUSD1Q9UJJ7 312 aaKnown RBP3.17□□□□□ -1.9
ATXN3-240ENST00000556339 RCL1Q9Y2P8 373 aaKnown RBP3.17□□□□□ -1.9
ATXN3-240ENST00000556339 TIMM9Q9Y5J7 89 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 MPC1Q9Y5U8 109 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 PLXNB1O43157 2135 aa3.17□□□□□ -1.9
ATXN3-240ENST00000556339 IGKV1D-8A0A087WSZ0 117 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 IGKV1-12A0A0C4DH73 117 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 hCG_1809904A0A1W2PP81 198 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 A0A1W2PPE2 198 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 A0A1W2PPH5 198 aa3.16□□□□□ -1.9
ATXN3-240ENST00000556339 A0A1W2PR64 198 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms