RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 LAMTOR1Q6IAA8 161 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 GLIPR1L1Q6UWM5 242 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 LHFPL3Q86UP9 236 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 CDH26Q8IXH8 852 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 TTC9CQ8N5M4 171 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 POM121L12Q8N7R1 296 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 MAPKAPK5-AS1Q8N8E1 139 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 ZNF114Q8NC26 417 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 OR4A5Q8NH83 315 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 GPR148Q8TDV2 347 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 IL1F10Q8WWZ1 152 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 CACNG8Q8WXS5 425 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 AP3S1Q92572 193 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 PTX4Q96A99 478 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 ORAI1Q96D31 301 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 TMEM80Q96HE8 168 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 MGLLQ99685 303 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 SPAG8Q99932 426 aaPredicted RBP3.52□□□□□ -1.85
ATXN3-239ENST00000556315 MND1Q9BWT6 205 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 SELENOIQ9C0D9 397 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 C11orf68Q9H3H3 251 aaKnown RBP3.52□□□□□ -1.85
ATXN3-239ENST00000556315 C5orf66Q9H5L9 145 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 ISG20L2Q9H9L3 353 aaKnown RBP3.52□□□□□ -1.85
ATXN3-239ENST00000556315 MRPL27Q9P0M9 148 aaKnown RBP3.52□□□□□ -1.85
ATXN3-239ENST00000556315 RABL2AQ9UBK7 228 aaPredicted RBP3.52□□□□□ -1.85
ATXN3-239ENST00000556315 ZNF221Q9UK13 617 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 RABL2BQ9UNT1 228 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 SELENOKQ9Y6D0 94 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 FAT2Q9NYQ8 4349 aa3.52□□□□□ -1.85
ATXN3-239ENST00000556315 MUC4Q99102 2169 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 SRRM4A7MD48 611 aaKnown RBP3.51□□□□□ -1.85
ATXN3-239ENST00000556315 A8MWP6 167 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 M0R2N4 97 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 PDCD6O75340 191 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 CRTAPO75718 401 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-239ENST00000556315 CCNKO75909 580 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 OR2J3O76001 311 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 P0DMU3 169 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 FAM231AP0DMU4 169 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 FAM231CP0DMU5 169 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 MGMTP16455 207 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 ZBTB25P24278 435 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 GADD45AP24522 165 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 HLA-DMAP28067 261 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 FCGR2BP31994 310 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-239ENST00000556315 CMC4P56277 68 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-239ENST00000556315 ASAH1Q13510 395 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 SPHARQ15513 63 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 PRSS8Q16651 343 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 C15orf32Q32M92 178 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 ZNF585BQ52M93 769 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 SOHLH1Q5JUK2 328 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 PAPPA-AS1Q5QFB9 102 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 HACD4Q5VWC8 232 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 RPL22L1Q6P5R6 122 aaKnown RBP3.51□□□□□ -1.85
ATXN3-239ENST00000556315 CFAP161Q6P656 301 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 ZNF880Q6PDB4 577 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 BTNL8Q6UX41 500 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 TMPRSS11AQ6ZMR5 421 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 SLC25A42Q86VD7 318 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 ZNF645Q8N7E2 425 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 OR11H2Q8NH07 326 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 NUDCD2Q8WVJ2 157 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 SRSF12Q8WXF0 261 aaKnown RBP3.51□□□□□ -1.85
ATXN3-239ENST00000556315 ZNF486Q96H40 463 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-239ENST00000556315 NEDD4LQ96PU5 975 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 SPIN2AQ99865 258 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 SPIN2BQ9BPZ2 258 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 HRH4Q9H3N8 390 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 RIMS4Q9H426 269 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-239ENST00000556315 BANF2Q9H503 90 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 FGF20Q9NP95 211 aaPredicted RBP3.51□□□□□ -1.85
ATXN3-239ENST00000556315 SLC35D1Q9NTN3 355 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 NDUFB11Q9NX14 153 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 UBQLN2Q9UHD9 624 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 SSR3Q9UNL2 185 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 DIMT1Q9UNQ2 313 aaKnown RBP3.51□□□□□ -1.85
ATXN3-239ENST00000556315 DNAH17Q9UFH2 4485 aa3.51□□□□□ -1.85
ATXN3-239ENST00000556315 IGHV4-4A0A075B6R2 117 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 TRAV10A0A0B4J240 114 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 OR4C46A6NHA9 309 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 CENPXA8MT69 81 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 M0R1X1 148 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 MYL12BO14950 172 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 OGG1O15527 345 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 NAPSAO96009 420 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 HLA-DQB1P01920 261 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 GSTT2P0CG29 244 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 GSTT2BP0CG30 244 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 RRASP10301 218 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 MYOD1P15172 320 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 IGFBP3P17936 291 aaPredicted RBP3.5□□□□□ -1.85
ATXN3-239ENST00000556315 MYL12AP19105 171 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 ANXA7P20073 488 aaKnown RBP3.5□□□□□ -1.85
ATXN3-239ENST00000556315 PSMB6P28072 239 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 FGF9P31371 208 aaPredicted RBP3.5□□□□□ -1.85
ATXN3-239ENST00000556315 SDC2P34741 201 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 UBE2KP61086 200 aa3.5□□□□□ -1.85
ATXN3-239ENST00000556315 LSM3P62310 102 aaKnown RBP3.5□□□□□ -1.85
ATXN3-239ENST00000556315 TPBGQ13641 420 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms