RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 IGHV3-23P01764 117 aa9.29□□□□□ -0.92
SRP54-206ENST00000555317 AKR1C4P17516 323 aa9.29□□□□□ -0.92
SRP54-206ENST00000555317 ARL3P36405 182 aa9.29□□□□□ -0.92
SRP54-206ENST00000555317 PRCDQ00LT1 54 aa9.29□□□□□ -0.92
SRP54-206ENST00000555317 WT1-ASQ06250 92 aa9.29□□□□□ -0.92
SRP54-206ENST00000555317 KLF5Q13887 457 aaPredicted RBP9.29□□□□□ -0.92
SRP54-206ENST00000555317 DEFB121Q5J5C9 76 aa9.29□□□□□ -0.92
SRP54-206ENST00000555317 FAM219AQ8IW50 185 aa9.29□□□□□ -0.92
SRP54-206ENST00000555317 OR9G4Q8NGQ1 327 aa9.29□□□□□ -0.92
SRP54-206ENST00000555317 RBPMSQ93062 196 aaKnown RBP9.29□□□□□ -0.92
SRP54-206ENST00000555317 FANCD2OSQ96PS1 177 aa9.29□□□□□ -0.92
SRP54-206ENST00000555317 SRRQ9GZT4 340 aa9.29□□□□□ -0.92
SRP54-206ENST00000555317 ZNF256Q9Y2P7 627 aaPredicted RBP9.29□□□□□ -0.92
SRP54-206ENST00000555317 F11RQ9Y624 299 aaKnown RBP9.29□□□□□ -0.92
SRP54-206ENST00000555317 S4R3C0 116 aa9.29□□□□□ -0.92
SRP54-206ENST00000555317 PIGBOS1A0A0B4J2F0 54 aa9.28□□□□□ -0.92
SRP54-206ENST00000555317 WI2-2373I1.2A0A1W2PRP0 233 aa9.28□□□□□ -0.92
SRP54-206ENST00000555317 PPP5D1E7EU14 171 aa9.28□□□□□ -0.92
SRP54-206ENST00000555317 BMPR1BO00238 502 aa9.28□□□□□ -0.92
SRP54-206ENST00000555317 GGCTO75223 188 aaKnown RBP9.28□□□□□ -0.92
SRP54-206ENST00000555317 HOXA1P49639 335 aaPredicted RBP9.28□□□□□ -0.92
SRP54-206ENST00000555317 HSPE1P61604 102 aaKnown RBP9.28□□□□□ -0.92
SRP54-206ENST00000555317 SRPXP78539 464 aa9.28□□□□□ -0.92
SRP54-206ENST00000555317 ERHP84090 104 aaKnown RBP9.28□□□□□ -0.92
SRP54-206ENST00000555317 TMEM268Q5VZI3 342 aa9.28□□□□□ -0.92
SRP54-206ENST00000555317 CLEC19AQ6UXS0 136 aa9.28□□□□□ -0.92
SRP54-206ENST00000555317 TMED4Q7Z7H5 227 aa9.28□□□□□ -0.92
SRP54-206ENST00000555317 NAP1L6A6NFF2 107 aa9.27□□□□□ -0.93
SRP54-206ENST00000555317 MFSD2BA6NFX1 497 aa9.27□□□□□ -0.93
SRP54-206ENST00000555317 DBX1A6NMT0 343 aa9.27□□□□□ -0.93
SRP54-206ENST00000555317 CENPXA8MT69 81 aa9.27□□□□□ -0.93
SRP54-206ENST00000555317 K7EIL1 84 aa9.27□□□□□ -0.93
SRP54-206ENST00000555317 CDS2O95674 445 aa9.27□□□□□ -0.93
SRP54-206ENST00000555317 SNCAP37840 140 aa9.27□□□□□ -0.93
SRP54-206ENST00000555317 IZUMO4Q1ZYL8 232 aa9.27□□□□□ -0.93
SRP54-206ENST00000555317 KLK9Q2XQG4 91 aa9.27□□□□□ -0.93
SRP54-206ENST00000555317 FAM106AQ4KMX7 169 aa9.27□□□□□ -0.93
SRP54-206ENST00000555317 OR1P1Q8NH06 330 aa9.27□□□□□ -0.93
SRP54-206ENST00000555317 VN1R17PQ8TDU5 208 aa9.27□□□□□ -0.93
SRP54-206ENST00000555317 GLYATL2Q8WU03 294 aa9.27□□□□□ -0.93
SRP54-206ENST00000555317 MISP3Q96FF7 219 aa9.27□□□□□ -0.93
SRP54-206ENST00000555317 CCDC140Q96MF4 163 aa9.27□□□□□ -0.93
SRP54-206ENST00000555317 PRR25Q96S07 402 aa9.27□□□□□ -0.93
SRP54-206ENST00000555317 SLC25A21Q9BQT8 299 aaPredicted RBP9.27□□□□□ -0.93
SRP54-206ENST00000555317 KLK9Q9UKQ9 250 aa9.27□□□□□ -0.93
SRP54-206ENST00000555317 A0A0B4J293 547 aa9.26□□□□□ -0.93
SRP54-206ENST00000555317 ST8SIA3O43173 380 aa9.26□□□□□ -0.93
SRP54-206ENST00000555317 CLEC3BP05452 202 aa9.26□□□□□ -0.93
SRP54-206ENST00000555317 GPR183P32249 361 aa9.26□□□□□ -0.93
SRP54-206ENST00000555317 SUB1P53999 127 aaKnown RBP eCLIP9.26□□□□□ -0.93
SRP54-206ENST00000555317 RBMS2Q15434 407 aaKnown RBP9.26□□□□□ -0.93
SRP54-206ENST00000555317 SPINK9Q5DT21 86 aa9.26□□□□□ -0.93
SRP54-206ENST00000555317 PLET1Q6UQ28 207 aa9.26□□□□□ -0.93
SRP54-206ENST00000555317 SELENOHQ8IZQ5 122 aaKnown RBP9.26□□□□□ -0.93
SRP54-206ENST00000555317 OR2C3Q8N628 320 aa9.26□□□□□ -0.93
SRP54-206ENST00000555317 UBAC2Q8NBM4 344 aa9.26□□□□□ -0.93
SRP54-206ENST00000555317 DYNLRB2Q8TF09 96 aa9.26□□□□□ -0.93
SRP54-206ENST00000555317 IL22RA2Q969J5 263 aa9.26□□□□□ -0.93
SRP54-206ENST00000555317 GALNT14Q96FL9 552 aa9.26□□□□□ -0.93
SRP54-206ENST00000555317 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.26□□□□□ -0.93
SRP54-206ENST00000555317 CACFD1Q9UGQ2 172 aa9.26□□□□□ -0.93
SRP54-206ENST00000555317 IGHV3-21A0A0B4J1V1 117 aa9.25□□□□□ -0.93
SRP54-206ENST00000555317 LINC00854A0A1B0GVQ3 168 aa9.25□□□□□ -0.93
SRP54-206ENST00000555317 ZNF320A2RRD8 509 aa9.25□□□□□ -0.93
SRP54-206ENST00000555317 OR2C1O95371 312 aa9.25□□□□□ -0.93
SRP54-206ENST00000555317 HLA-AP01891 365 aaKnown RBP9.25□□□□□ -0.93
SRP54-206ENST00000555317 P0C879 139 aa9.25□□□□□ -0.93
SRP54-206ENST00000555317 VAMP1P23763 118 aa9.25□□□□□ -0.93
SRP54-206ENST00000555317 Q56UQ5 140 aa9.25□□□□□ -0.93
SRP54-206ENST00000555317 TMEM128Q5BJH2 165 aa9.25□□□□□ -0.93
SRP54-206ENST00000555317 LGI3Q8N145 548 aa9.25□□□□□ -0.93
SRP54-206ENST00000555317 ZNF114Q8NC26 417 aa9.25□□□□□ -0.93
SRP54-206ENST00000555317 ZNF502Q8TBZ5 544 aa9.25□□□□□ -0.93
SRP54-206ENST00000555317 TMEM230Q96A57 120 aa9.25□□□□□ -0.93
SRP54-206ENST00000555317 ZC4H2Q9NQZ6 224 aa9.25□□□□□ -0.93
SRP54-206ENST00000555317 GAR1Q9NY12 217 aaKnown RBP9.25□□□□□ -0.93
SRP54-206ENST00000555317 C21orf62Q9NYP8 219 aa9.25□□□□□ -0.93
SRP54-206ENST00000555317 CACNG5Q9UF02 275 aa9.25□□□□□ -0.93
SRP54-206ENST00000555317 TMEM56-RWDD3S4R434 201 aa9.25□□□□□ -0.93
SRP54-206ENST00000555317 OR2T8A6NH00 312 aa9.24□□□□□ -0.93
SRP54-206ENST00000555317 SULT1A3P0DMM9 295 aa9.24□□□□□ -0.93
SRP54-206ENST00000555317 SULT1A4P0DMN0 295 aa9.24□□□□□ -0.93
SRP54-206ENST00000555317 SPNP16150 400 aa9.24□□□□□ -0.93
SRP54-206ENST00000555317 SPCS3P61009 180 aa9.24□□□□□ -0.93
SRP54-206ENST00000555317 TMEM187Q14656 261 aa9.24□□□□□ -0.93
SRP54-206ENST00000555317 BAK1Q16611 211 aa9.24□□□□□ -0.93
SRP54-206ENST00000555317 SPSB3Q6PJ21 355 aa9.24□□□□□ -0.93
SRP54-206ENST00000555317 HAPLN4Q86UW8 402 aa9.24□□□□□ -0.93
SRP54-206ENST00000555317 GPHB5Q86YW7 130 aa9.24□□□□□ -0.93
SRP54-206ENST00000555317 CENPSQ8N2Z9 138 aa9.24□□□□□ -0.93
SRP54-206ENST00000555317 LHFPL5Q8TAF8 219 aa9.24□□□□□ -0.93
SRP54-206ENST00000555317 PINX1Q96BK5 328 aaKnown RBP9.24□□□□□ -0.93
SRP54-206ENST00000555317 BSCL2Q96G97 398 aaPredicted RBP9.24□□□□□ -0.93
SRP54-206ENST00000555317 C7orf50Q9BRJ6 194 aaKnown RBP9.24□□□□□ -0.93
SRP54-206ENST00000555317 PALMDQ9NP74 551 aa9.24□□□□□ -0.93
SRP54-206ENST00000555317 DMRT1Q9Y5R6 373 aa9.24□□□□□ -0.93
SRP54-206ENST00000555317 A0A0B4J2A0 478 aa9.23□□□□□ -0.93
SRP54-206ENST00000555317 A0A0G2JRQ6 117 aa9.23□□□□□ -0.93
SRP54-206ENST00000555317 CEBPZOSA8MTT3 80 aa9.23□□□□□ -0.93
SRP54-206ENST00000555317 LGALS9O00182 355 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms