RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 GCSAMLQ5JQS6 135 aa12.16□□□□□ -0.46
XRCC3-211ENST00000555055 ABHD12Q8N2K0 398 aa12.16□□□□□ -0.46
XRCC3-211ENST00000555055 RAB1CQ92928 201 aa12.16□□□□□ -0.46
XRCC3-211ENST00000555055 HINT2Q9BX68 163 aa12.16□□□□□ -0.46
XRCC3-211ENST00000555055 GOLT1BQ9Y3E0 138 aa12.16□□□□□ -0.46
XRCC3-211ENST00000555055 PMS2P5A8MQ11 134 aa12.16□□□□□ -0.46
XRCC3-211ENST00000555055 F2RL2O00254 374 aa12.16□□□□□ -0.46
XRCC3-211ENST00000555055 RAB29O14966 203 aa12.16□□□□□ -0.46
XRCC3-211ENST00000555055 ZNF788Q6ZQV5 615 aa12.16□□□□□ -0.46
XRCC3-211ENST00000555055 H1FXQ92522 213 aaKnown RBP12.16□□□□□ -0.46
XRCC3-211ENST00000555055 S1PR3Q99500 378 aa12.16□□□□□ -0.46
XRCC3-211ENST00000555055 MIEN1Q9BRT3 115 aa12.16□□□□□ -0.46
XRCC3-211ENST00000555055 TMEM208Q9BTX3 173 aa12.16□□□□□ -0.46
XRCC3-211ENST00000555055 RRHO14718 337 aa12.15□□□□□ -0.46
XRCC3-211ENST00000555055 HPRT1P00492 218 aa12.15□□□□□ -0.46
XRCC3-211ENST00000555055 IGKV1-16P04430 117 aa12.15□□□□□ -0.46
XRCC3-211ENST00000555055 NHLH1Q02575 133 aa12.15□□□□□ -0.46
XRCC3-211ENST00000555055 NUP37Q8NFH4 326 aa12.15□□□□□ -0.46
XRCC3-211ENST00000555055 FAM222BQ8WU58 562 aa12.15□□□□□ -0.46
XRCC3-211ENST00000555055 GATAD1Q8WUU5 269 aa12.15□□□□□ -0.46
XRCC3-211ENST00000555055 SDSLQ96GA7 329 aa12.15□□□□□ -0.46
XRCC3-211ENST00000555055 KCNIP2Q9NS61 270 aa12.15□□□□□ -0.46
XRCC3-211ENST00000555055 TMEM140Q9NV12 185 aa12.15□□□□□ -0.46
XRCC3-211ENST00000555055 MALRD1Q5VYJ5 2156 aa12.15□□□□□ -0.46
XRCC3-211ENST00000555055 E7EQL1 145 aa12.15□□□□□ -0.47
XRCC3-211ENST00000555055 FFAR4Q5NUL3 377 aa12.15□□□□□ -0.47
XRCC3-211ENST00000555055 FAM78BQ5VT40 261 aa12.15□□□□□ -0.47
XRCC3-211ENST00000555055 TMEM106BQ9NUM4 274 aa12.15□□□□□ -0.47
XRCC3-211ENST00000555055 ELOVL5Q9NYP7 299 aa12.15□□□□□ -0.47
XRCC3-211ENST00000555055 ZNF835Q9Y2P0 537 aa12.15□□□□□ -0.47
XRCC3-211ENST00000555055 ARHGAP32A7KAX9 2087 aa12.15□□□□□ -0.47
XRCC3-211ENST00000555055 C11orf94C9JXX5 98 aa12.14□□□□□ -0.47
XRCC3-211ENST00000555055 C17orf112F2Z3M2 114 aa12.14□□□□□ -0.47
XRCC3-211ENST00000555055 PAGE4O60829 102 aa12.14□□□□□ -0.47
XRCC3-211ENST00000555055 DIAPH2-AS1Q14236 149 aa12.14□□□□□ -0.47
XRCC3-211ENST00000555055 OR10P1Q8NGE3 313 aa12.14□□□□□ -0.47
XRCC3-211ENST00000555055 OR4A16Q8NH70 328 aa12.14□□□□□ -0.47
XRCC3-211ENST00000555055 CIB3Q96Q77 187 aaPredicted RBP12.14□□□□□ -0.47
XRCC3-211ENST00000555055 SLC25A10Q9UBX3 287 aaPredicted RBP12.14□□□□□ -0.47
XRCC3-211ENST00000555055 A0A0U1RQK1 487 aa12.14□□□□□ -0.47
XRCC3-211ENST00000555055 ZNF320A2RRD8 509 aa12.14□□□□□ -0.47
XRCC3-211ENST00000555055 C15orf62A8K5M9 175 aa12.14□□□□□ -0.47
XRCC3-211ENST00000555055 TPPP2P59282 170 aa12.14□□□□□ -0.47
XRCC3-211ENST00000555055 MRPS11P82912 194 aaKnown RBP12.14□□□□□ -0.47
XRCC3-211ENST00000555055 TRAT1Q6PIZ9 186 aa12.14□□□□□ -0.47
XRCC3-211ENST00000555055 TBX15Q96SF7 602 aa12.14□□□□□ -0.47
XRCC3-211ENST00000555055 NPCDR1Q9BY65 106 aa12.14□□□□□ -0.47
XRCC3-211ENST00000555055 JKAMPQ9P055 326 aa12.14□□□□□ -0.47
XRCC3-211ENST00000555055 SHISA9B4DS77 424 aa12.13□□□□□ -0.47
XRCC3-211ENST00000555055 NPPCP23582 126 aa12.13□□□□□ -0.47
XRCC3-211ENST00000555055 CR1LQ2VPA4 569 aa12.13□□□□□ -0.47
XRCC3-211ENST00000555055 C3orf36Q3SXR2 165 aa12.13□□□□□ -0.47
XRCC3-211ENST00000555055 CMTM2Q8TAZ6 248 aa12.13□□□□□ -0.47
XRCC3-211ENST00000555055 FAM122AQ96E09 287 aa12.13□□□□□ -0.47
XRCC3-211ENST00000555055 NAV3Q8IVL0 2385 aa12.13□□□□□ -0.47
XRCC3-211ENST00000555055 HIVEP3Q5T1R4 2406 aa12.13□□□□□ -0.47
XRCC3-211ENST00000555055 LY6HO94772 140 aa12.13□□□□□ -0.47
XRCC3-211ENST00000555055 RPL31P62899 125 aaKnown RBP12.13□□□□□ -0.47
XRCC3-211ENST00000555055 TMEM183BQ1AE95 376 aa12.13□□□□□ -0.47
XRCC3-211ENST00000555055 TCTEX1D1Q8N7M0 179 aa12.13□□□□□ -0.47
XRCC3-211ENST00000555055 ZNF709Q8N972 641 aa12.13□□□□□ -0.47
XRCC3-211ENST00000555055 DYNLRB1Q9NP97 96 aa12.13□□□□□ -0.47
XRCC3-211ENST00000555055 HEYLQ9NQ87 328 aaPredicted RBP12.13□□□□□ -0.47
XRCC3-211ENST00000555055 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.12□□□□□ -0.47
XRCC3-211ENST00000555055 ABCA1O95477 2261 aa12.12□□□□□ -0.47
XRCC3-211ENST00000555055 CDC34P49427 236 aaPredicted RBP12.12□□□□□ -0.47
XRCC3-211ENST00000555055 RELBQ01201 579 aa12.12□□□□□ -0.47
XRCC3-211ENST00000555055 PRSS8Q16651 343 aa12.12□□□□□ -0.47
XRCC3-211ENST00000555055 TPTE2P1Q5T6R2 138 aa12.12□□□□□ -0.47
XRCC3-211ENST00000555055 TMEM256Q8N2U0 113 aa12.12□□□□□ -0.47
XRCC3-211ENST00000555055 CHRNA7P36544 502 aa12.12□□□□□ -0.47
XRCC3-211ENST00000555055 RPL29P47914 159 aaKnown RBP12.12□□□□□ -0.47
XRCC3-211ENST00000555055 CLEC12BQ2HXU8 276 aa12.12□□□□□ -0.47
XRCC3-211ENST00000555055 DDB2Q92466 427 aa12.12□□□□□ -0.47
XRCC3-211ENST00000555055 SFRP2Q96HF1 295 aa12.12□□□□□ -0.47
XRCC3-211ENST00000555055 IDI2-AS1Q9NZ38 188 aa12.12□□□□□ -0.47
XRCC3-211ENST00000555055 CTSZQ9UBR2 303 aa12.12□□□□□ -0.47
XRCC3-211ENST00000555055 MSRB2Q9Y3D2 182 aa12.12□□□□□ -0.47
XRCC3-211ENST00000555055 CELSR1Q9NYQ6 3014 aa12.11□□□□□ -0.47
XRCC3-211ENST00000555055 SRRM4A7MD48 611 aaKnown RBP12.11□□□□□ -0.47
XRCC3-211ENST00000555055 TNFRSF1AP19438 455 aa12.11□□□□□ -0.47
XRCC3-211ENST00000555055 ERVK-16P61578 105 aa12.11□□□□□ -0.47
XRCC3-211ENST00000555055 GNB1P62873 340 aa12.11□□□□□ -0.47
XRCC3-211ENST00000555055 OR4A47Q6IF82 309 aa12.11□□□□□ -0.47
XRCC3-211ENST00000555055 RNASE6Q93091 150 aaKnown RBP12.11□□□□□ -0.47
XRCC3-211ENST00000555055 ZNF705FA8MVS1 300 aaPredicted RBP12.11□□□□□ -0.47
XRCC3-211ENST00000555055 ZNF705DP0CH99 300 aaPredicted RBP12.11□□□□□ -0.47
XRCC3-211ENST00000555055 ZNF705BP0CI00 300 aaPredicted RBP12.11□□□□□ -0.47
XRCC3-211ENST00000555055 PPIAL4EA0A075B759 164 aa12.1□□□□□ -0.47
XRCC3-211ENST00000555055 TRAV38-1A0A0B4J264 116 aa12.1□□□□□ -0.47
XRCC3-211ENST00000555055 PPIAL4DF5H284 164 aa12.1□□□□□ -0.47
XRCC3-211ENST00000555055 TMEM178BH3BS89 294 aa12.1□□□□□ -0.47
XRCC3-211ENST00000555055 PPIAL4FP0DN26 164 aa12.1□□□□□ -0.47
XRCC3-211ENST00000555055 BRS3P32247 399 aa12.1□□□□□ -0.47
XRCC3-211ENST00000555055 TEX36Q5VZQ5 186 aa12.1□□□□□ -0.47
XRCC3-211ENST00000555055 TMEM200BQ69YZ2 307 aa12.1□□□□□ -0.47
XRCC3-211ENST00000555055 ZNF705AQ6ZN79 300 aaPredicted RBP12.1□□□□□ -0.47
XRCC3-211ENST00000555055 ZNF439Q8NDP4 499 aa12.1□□□□□ -0.47
XRCC3-211ENST00000555055 PATZ1Q9HBE1 687 aaKnown RBP12.1□□□□□ -0.47
XRCC3-211ENST00000555055 PPIAL4AQ9Y536 164 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms