RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 FOLR3P41439 243 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 RNPS1Q15287 305 aaKnown RBP7.34□□□□□ -1.23
SYNE2-217ENST00000555022 VWC2Q2TAL6 325 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 GDF5OSQ5U4N7 250 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 Q71RC1 249 aaPredicted RBP7.34□□□□□ -1.23
SYNE2-217ENST00000555022 WFDC3Q8IUB2 231 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 OR8B3Q8NGG8 313 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 OR5B3Q8NH48 314 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 POM121L2Q96KW2 1035 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 TRIB1Q96RU8 372 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 COL4A2P08572 1712 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 KMT2EQ8IZD2 1858 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 TMEM30CPA0ZSE6 113 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 GGTLC3B5MD39 225 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 NPY1RP25929 384 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 PRRX1P54821 245 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 TEX45Q8NA69 505 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 COQ2Q96H96 371 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 RTL8AQ9BWD3 113 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 MEGF9Q9H1U4 602 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 DUSP13Q9UII6 198 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 POLDIP2Q9Y2S7 368 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 KLF13Q9Y2Y9 288 aaPredicted RBP7.34□□□□□ -1.23
SYNE2-217ENST00000555022 CSMD1Q96PZ7 3565 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 PIEZO2Q9H5I5 2752 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 FAM181BA6NEQ2 426 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 OR4C46A6NHA9 309 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 TMPRSS2O15393 492 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 KLF7O75840 302 aaPredicted RBP7.34□□□□□ -1.23
SYNE2-217ENST00000555022 SRD5A2P31213 254 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 REG1BP48304 166 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 ERVK-16P61578 105 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 CNEP1R1Q8N9A8 125 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 ZNRF1Q8ND25 227 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 Q8NFD4 153 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 C18orf32Q8TCD1 76 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 CST9LQ9H4G1 147 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 ENY2Q9NPA8 101 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 TMEM140Q9NV12 185 aa7.34□□□□□ -1.23
SYNE2-217ENST00000555022 TET2Q6N021 2002 aaPredicted RBP7.34□□□□□ -1.24
SYNE2-217ENST00000555022 IGHV2OR16-5A0A0B4J2B6 119 aa7.33□□□□□ -1.24
SYNE2-217ENST00000555022 UBE2G1P62253 170 aa7.33□□□□□ -1.24
SYNE2-217ENST00000555022 ZNF718Q3SXZ3 478 aa7.33□□□□□ -1.24
SYNE2-217ENST00000555022 C19orf35Q6ZS72 473 aa7.33□□□□□ -1.24
SYNE2-217ENST00000555022 KLHDC1Q8N7A1 406 aa7.33□□□□□ -1.24
SYNE2-217ENST00000555022 AGBL5Q8NDL9 886 aa7.33□□□□□ -1.24
SYNE2-217ENST00000555022 SPSB4Q96A44 273 aa7.33□□□□□ -1.24
SYNE2-217ENST00000555022 TMEM45BQ96B21 275 aa7.33□□□□□ -1.24
SYNE2-217ENST00000555022 IMMP1LQ96LU5 166 aa7.33□□□□□ -1.24
SYNE2-217ENST00000555022 CHRDL1Q9BU40 450 aa7.33□□□□□ -1.24
SYNE2-217ENST00000555022 GAL3ST2Q9H3Q3 398 aa7.33□□□□□ -1.24
SYNE2-217ENST00000555022 TCF19Q9Y242 345 aa7.33□□□□□ -1.24
SYNE2-217ENST00000555022 SPENQ96T58 3664 aaKnown RBP7.33□□□□□ -1.24
SYNE2-217ENST00000555022 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.33□□□□□ -1.24
SYNE2-217ENST00000555022 REG1AP05451 166 aa7.33□□□□□ -1.24
SYNE2-217ENST00000555022 CYB561P49447 251 aa7.33□□□□□ -1.24
SYNE2-217ENST00000555022 CLDN18P56856 261 aa7.33□□□□□ -1.24
SYNE2-217ENST00000555022 RHOBP62745 196 aa7.33□□□□□ -1.24
SYNE2-217ENST00000555022 UBE2L3P68036 154 aaKnown RBP7.33□□□□□ -1.24
SYNE2-217ENST00000555022 SSBP2P81877 361 aaPredicted RBP7.33□□□□□ -1.24
SYNE2-217ENST00000555022 RPL19P84098 196 aaKnown RBP7.33□□□□□ -1.24
SYNE2-217ENST00000555022 Q6ZSR3 168 aa7.33□□□□□ -1.24
SYNE2-217ENST00000555022 OR10W1Q8NGF6 305 aa7.33□□□□□ -1.24
SYNE2-217ENST00000555022 SARAFQ96BY9 339 aa7.33□□□□□ -1.24
SYNE2-217ENST00000555022 PGLYRP4Q96LB8 373 aa7.33□□□□□ -1.24
SYNE2-217ENST00000555022 SF3B5Q9BWJ5 86 aaKnown RBP7.33□□□□□ -1.24
SYNE2-217ENST00000555022 PCED1AQ9H1Q7 454 aa7.33□□□□□ -1.24
SYNE2-217ENST00000555022 MRPL14Q6P1L8 145 aaKnown RBP7.33□□□□□ -1.24
SYNE2-217ENST00000555022 DUX4L9Q6RFH8 374 aaPredicted RBP7.33□□□□□ -1.24
SYNE2-217ENST00000555022 ORAOV1Q8WV07 137 aa7.33□□□□□ -1.24
SYNE2-217ENST00000555022 RNF138Q8WVD3 245 aa7.33□□□□□ -1.24
SYNE2-217ENST00000555022 NABP2Q9BQ15 211 aa7.33□□□□□ -1.24
SYNE2-217ENST00000555022 AMY1AP04745 511 aa7.32□□□□□ -1.24
SYNE2-217ENST00000555022 SFXN3Q9BWM7 321 aa7.32□□□□□ -1.24
SYNE2-217ENST00000555022 TRAV8-6A0A0B4J262 113 aa7.32□□□□□ -1.24
SYNE2-217ENST00000555022 FAM90A10PA6NDY2 464 aa7.32□□□□□ -1.24
SYNE2-217ENST00000555022 FAM90A18PA6NE21 464 aa7.32□□□□□ -1.24
SYNE2-217ENST00000555022 FAM90A16PA6NEW6 464 aa7.32□□□□□ -1.24
SYNE2-217ENST00000555022 FAM90A20PA6NIJ5 464 aa7.32□□□□□ -1.24
SYNE2-217ENST00000555022 FAM90A8PA6NJQ4 464 aa7.32□□□□□ -1.24
SYNE2-217ENST00000555022 FAM90A7PA6NKC0 464 aa7.32□□□□□ -1.24
SYNE2-217ENST00000555022 FAM90A22PA8MWA6 464 aa7.32□□□□□ -1.24
SYNE2-217ENST00000555022 FAM90A12PA8MX19 464 aa7.32□□□□□ -1.24
SYNE2-217ENST00000555022 FAM90A5PA8MXJ8 464 aa7.32□□□□□ -1.24
SYNE2-217ENST00000555022 FAM90A23PA8MXZ1 464 aa7.32□□□□□ -1.24
SYNE2-217ENST00000555022 SPINT2O43291 252 aa7.32□□□□□ -1.24
SYNE2-217ENST00000555022 TIMM8AO60220 97 aaPredicted RBP7.32□□□□□ -1.24
SYNE2-217ENST00000555022 PROP1O75360 226 aa7.32□□□□□ -1.24
SYNE2-217ENST00000555022 FAM90A15PP0C7V4 464 aa7.32□□□□□ -1.24
SYNE2-217ENST00000555022 FAM90A13PP0C7W8 464 aa7.32□□□□□ -1.24
SYNE2-217ENST00000555022 FAM90A14PP0C7W9 464 aa7.32□□□□□ -1.24
SYNE2-217ENST00000555022 FAM90A24PP0C7X0 464 aa7.32□□□□□ -1.24
SYNE2-217ENST00000555022 OCIAD2Q56VL3 154 aa7.32□□□□□ -1.24
SYNE2-217ENST00000555022 ATP1A1-AS1Q5TC04 95 aa7.32□□□□□ -1.24
SYNE2-217ENST00000555022 CLEC2AQ6UVW9 174 aa7.32□□□□□ -1.24
SYNE2-217ENST00000555022 Q6ZS49 121 aa7.32□□□□□ -1.24
SYNE2-217ENST00000555022 C1orf229Q6ZS94 237 aaPredicted RBP7.32□□□□□ -1.24
SYNE2-217ENST00000555022 SPACA3Q8IXA5 215 aa7.32□□□□□ -1.24
SYNE2-217ENST00000555022 ZNF391Q9UJN7 358 aa7.32□□□□□ -1.24
SYNE2-217ENST00000555022 F11RQ9Y624 299 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms