RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 CREBL2O60519 120 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-231ENST00000554994 KBTBD11O94819 623 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 S1PR2O95136 353 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 SPDEFO95238 335 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 IGHV3-23P01764 117 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 IGHG4P01861 327 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 IGF1P05019 195 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 CRYGBP07316 175 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 OR9G9P0C7N8 305 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 F2RP25116 425 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 FAUP35544 74 aaKnown RBP3.6□□□□□ -1.83
ATXN3-231ENST00000554994 MYCNOSP40205 109 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 RPL27AP46776 148 aaKnown RBP3.6□□□□□ -1.83
ATXN3-231ENST00000554994 CDX1P47902 265 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-231ENST00000554994 BCAP31P51572 246 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 PIGPP57054 158 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 RPL8P62917 257 aaKnown RBP3.6□□□□□ -1.83
ATXN3-231ENST00000554994 MRPS10P82664 201 aaKnown RBP3.6□□□□□ -1.83
ATXN3-231ENST00000554994 ATP5G2Q06055 141 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 OXA1LQ15070 435 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 NDUFA5Q16718 116 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 AKIRIN2Q53H80 203 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 C10orf55Q5SWW7 151 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 OR4A47Q6IF82 309 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 SLC25A24Q6NUK1 477 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 Q8N402 240 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 TOMM5Q8N4H5 51 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 ZNF491Q8N8L2 437 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 Q8N9P0 234 aaPredicted RBP3.6□□□□□ -1.83
ATXN3-231ENST00000554994 CCDC71LQ8N9Z2 235 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 OR51S1Q8NGJ8 323 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 OR5M8Q8NGP6 311 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 VSTM2AQ8TAG5 236 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 SRSF12Q8WXF0 261 aaKnown RBP3.6□□□□□ -1.83
ATXN3-231ENST00000554994 SPIN2AQ99865 258 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 ARPC5LQ9BPX5 153 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 SPIN2BQ9BPZ2 258 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 FXYD6Q9H0Q3 95 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 GNB4Q9HAV0 340 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 SCP2D1Q9UJQ7 156 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 KCNIP3Q9Y2W7 256 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 OR51B2Q9Y5P1 312 aa3.6□□□□□ -1.83
ATXN3-231ENST00000554994 HUWE1Q7Z6Z7 4374 aaKnown RBP3.6□□□□□ -1.83
ATXN3-231ENST00000554994 IGHV3-21A0A0B4J1V1 117 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 A0A0G2JLM5 398 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 TEX50A0A1B0GTY4 177 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 CENPXA8MT69 81 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 B5MCH6 92 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 SEC14L6B5MCN3 397 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 UPK2O00526 184 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 CTDSPLO15194 276 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 OR2J3O76001 311 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 TPPPO94811 219 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 ATG12O94817 140 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 NXPH3O95157 252 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 DHFRP00374 187 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 IFNA17P01571 189 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 HSPB1P04792 205 aaKnown RBP3.59□□□□□ -1.83
ATXN3-231ENST00000554994 TRAPPC2P0DI81 140 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 TRAPPC2BP0DI82 140 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 OR13C7P0DN81 318 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 HLA-GP17693 338 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 PSMB8P28062 276 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 PPIFP30405 207 aaKnown RBP3.59□□□□□ -1.83
ATXN3-231ENST00000554994 MAS1LP35410 378 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 AKR1C2P52895 323 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 UCP3P55916 312 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 BRWD1-AS2P59051 145 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 TAS2R31P59538 309 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 AP3S2P59780 193 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 OR2B8PP59922 312 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 RHOGP84095 191 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 NDPQ00604 133 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 ZNF45Q02386 682 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 SSBP1Q04837 148 aaKnown RBP3.59□□□□□ -1.83
ATXN3-231ENST00000554994 TATDN3Q17R31 274 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 IZUMO4Q1ZYL8 232 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 SPINK9Q5DT21 86 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 TRIQKQ629K1 86 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 TMED4Q7Z7H5 227 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 SLC25A42Q86VD7 318 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 SGPP2Q8IWX5 399 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 CENPSQ8N2Z9 138 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 ARRDC1Q8N5I2 433 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 TCTEX1D1Q8N7M0 179 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 ADAD2Q8NCV1 583 aaKnown RBP3.59□□□□□ -1.83
ATXN3-231ENST00000554994 OR10W1Q8NGF6 305 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 OR4C16Q8NGL9 310 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 OR6Q1Q8NGQ2 317 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 OR13C8Q8NGS7 320 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 TMEM167AQ8TBQ9 72 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 SMIM4Q8WVI0 70 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 DCUN1D4Q92564 292 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 RRNAD1Q96FB5 475 aaKnown RBP3.59□□□□□ -1.83
ATXN3-231ENST00000554994 UBE2E2Q96LR5 201 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 SCGB3A2Q96PL1 93 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 RCHY1Q96PM5 261 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 PRRT1Q99946 306 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 PDCD10Q9BUL8 212 aa3.59□□□□□ -1.83
ATXN3-231ENST00000554994 NXF2Q9GZY0 626 aaKnown RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms