RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 BCL2L11O43521 198 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 SSSCA1O60232 199 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 IGKV1D-33P01593 117 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 IGKV1-33P01594 117 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 OPN1MWP04001 364 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 NMBP08949 121 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 OPN1MW2P0DN77 364 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 OPN1MW3P0DN78 364 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 DEFA4P12838 97 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 THBS3P49746 956 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 RAB7AP51149 207 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 AP2S1P53680 142 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-230ENST00000554673 S100A10P60903 97 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 RUNX1Q01196 453 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 DEFA5Q01523 94 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 CFHR3Q02985 330 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 EBI3Q14213 229 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 ZNF345Q14585 488 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 SMCO1Q147U7 214 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 PSG5Q15238 335 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 ESCO2Q56NI9 601 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 PVRIGQ6DKI7 326 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 Q6ZWC4 215 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 CENPVQ7Z7K6 275 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-230ENST00000554673 ZNF546Q86UE3 836 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 ZNF695Q8IW36 515 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 SLC7A5P1Q8MH63 180 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 ZNF680Q8NEM1 530 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 TMEM167AQ8TBQ9 72 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 LHX4Q969G2 390 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 CXorf58Q96LI9 332 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 Q96MF0 132 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 SMR3AQ99954 134 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 HSPB9Q9BQS6 159 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 PCGF1Q9BSM1 259 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 MFFQ9GZY8 342 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 FBXL15Q9H469 300 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 FNDC4Q9H6D8 234 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-230ENST00000554673 ZNF430Q9H8G1 570 aaPredicted RBP4.61□□□□□ -1.67
ATXN3-230ENST00000554673 GAR1Q9NY12 217 aaKnown RBP4.61□□□□□ -1.67
ATXN3-230ENST00000554673 COA4Q9NYJ1 87 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 COMMD9Q9P000 198 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 HILPDAQ9Y5L2 63 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 KPTNQ9Y664 436 aa4.61□□□□□ -1.67
ATXN3-230ENST00000554673 FN1P02751 2386 aaKnown RBP4.61□□□□□ -1.67
ATXN3-230ENST00000554673 TRAV40A0A0B4J280 105 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 WRBO00258 174 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 ENSAO43768 121 aaKnown RBP4.6□□□□□ -1.67
ATXN3-230ENST00000554673 SLC25A17O43808 307 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 TSC22D2O75157 780 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 FOXH1O75593 365 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 CST7O76096 145 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 KBTBD11O94819 623 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 NDUFA3O95167 84 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 HPRT1P00492 218 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 METTL15P1P0C7V9 234 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 RNASE2P10153 161 aaKnown RBP4.6□□□□□ -1.67
ATXN3-230ENST00000554673 AREGP15514 252 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 S100A11P31949 105 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 NKX2-1P43699 371 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-230ENST00000554673 DYNLT3P51808 116 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 LOXL1Q08397 574 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-230ENST00000554673 ZNF726P1Q15940 193 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 TMEM249Q2WGJ8 235 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 TMEM30BQ3MIR4 351 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 HIST2H2BDQ6DRA6 164 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 FAM71F2Q6NXP2 309 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 TEX261Q6UWH6 196 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 ALKAL2Q6UX46 152 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 ACOT7LQ6ZUV0 252 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 CMTM1Q8IZ96 169 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 Q8N9W7 124 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 NHLRC2Q8NBF2 726 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 OCC1Q8TAD7 63 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 FAM216AQ8WUB2 273 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 DCUN1D4Q92564 292 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 TIMD4Q96H15 378 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 SMIM8Q96KF7 97 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 PIMREGQ9BSJ6 248 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 VSIRQ9H7M9 311 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 LYRM2Q9NU23 88 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-230ENST00000554673 FOXA2Q9Y261 457 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-230ENST00000554673 KCNIP3Q9Y2W7 256 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 FAM96BQ9Y3D0 163 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 RBM7Q9Y580 266 aaKnown RBP4.6□□□□□ -1.67
ATXN3-230ENST00000554673 AUP1Q9Y679 476 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 U3KQ87 197 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 HIVEP1P15822 2718 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 CREBBPQ92793 2442 aa4.6□□□□□ -1.67
ATXN3-230ENST00000554673 IGKV1D-37A0A075B6S9 117 aa4.59□□□□□ -1.67
ATXN3-230ENST00000554673 A0A0A0MQY5 61 aa4.59□□□□□ -1.67
ATXN3-230ENST00000554673 IGHV1-69DA0A0B4J2H0 117 aa4.59□□□□□ -1.67
ATXN3-230ENST00000554673 C9JQL5 133 aa4.59□□□□□ -1.67
ATXN3-230ENST00000554673 L7N2F9 121 aa4.59□□□□□ -1.67
ATXN3-230ENST00000554673 NDUFS8O00217 210 aa4.59□□□□□ -1.67
ATXN3-230ENST00000554673 TOR1AO14656 332 aa4.59□□□□□ -1.67
ATXN3-230ENST00000554673 NPFFO15130 113 aa4.59□□□□□ -1.67
ATXN3-230ENST00000554673 FGF16O43320 207 aa4.59□□□□□ -1.67
ATXN3-230ENST00000554673 SYNGR2O43760 224 aa4.59□□□□□ -1.67
ATXN3-230ENST00000554673 SOX15O60248 233 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms