RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 OR5V1Q9UGF6 321 aa3.63□□□□□ -1.83
ATXN3-227ENST00000554491 PCTPQ9UKL6 214 aa3.63□□□□□ -1.83
ATXN3-227ENST00000554491 ZNF780BQ9Y6R6 833 aa3.63□□□□□ -1.83
ATXN3-227ENST00000554491 DIDO1Q9BTC0 2240 aaKnown RBP3.62□□□□□ -1.83
ATXN3-227ENST00000554491 A0A1W2PP11 408 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 FAM220BPB1ANY3 271 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 TEX22C9J3V5 150 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 TMEM250H0YL14 139 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 H3BMH7 237 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 RHODO00212 210 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 PRKNO60260 465 aaPredicted RBP3.62□□□□□ -1.83
ATXN3-227ENST00000554491 RAMP1O60894 148 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 TBL1XO60907 577 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 CLDN7O95471 211 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 OR2H2O95918 312 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 HLA-DRB1P01911 266 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 TTRP02766 147 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 EIF4EP06730 217 aaKnown RBP3.62□□□□□ -1.83
ATXN3-227ENST00000554491 H1F0P07305 194 aaKnown RBP3.62□□□□□ -1.83
ATXN3-227ENST00000554491 LINC00869P0C866 280 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 LYL1P12980 280 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 CRYBB3P26998 211 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 BLVRBP30043 206 aaPredicted RBP3.62□□□□□ -1.83
ATXN3-227ENST00000554491 GRPRP30550 384 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 ZFP36L2P47974 494 aaKnown RBP3.62□□□□□ -1.83
ATXN3-227ENST00000554491 CCL11P51671 97 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 SLC25A1P53007 311 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 KLRB1Q12918 225 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 C2orf68Q2NKX9 166 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 GGTA1PQ4G0N0 100 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 LY6G6FQ5SQ64 297 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 SLC25A30Q5SVS4 291 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 ZNF684Q5T5D7 378 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 UNQ6126/PRO20091Q6UXV3 157 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 Q6ZRG5 221 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 TMEM219Q86XT9 240 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 STHQ8IWL8 128 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 LINC00471Q8N535 108 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 OR10P1Q8NGE3 313 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 OR5AR1Q8NGP9 310 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 OR10Q1Q8NGQ4 319 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 OR6K6Q8NGW6 343 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 OR10D3Q8NH80 312 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 ATP6V0E2Q8NHE4 81 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 AQP10Q96PS8 301 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 PMCHL2Q9BQD1 86 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 NUDT22Q9BRQ3 303 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 RTBDNQ9BSG5 229 aaPredicted RBP3.62□□□□□ -1.83
ATXN3-227ENST00000554491 MRPL32Q9BYC8 188 aaKnown RBP3.62□□□□□ -1.83
ATXN3-227ENST00000554491 OR2H1Q9GZK4 316 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 REEP1Q9H902 201 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 PNRC2Q9NPJ4 139 aaKnown RBP3.62□□□□□ -1.83
ATXN3-227ENST00000554491 ZNF71Q9NQZ8 489 aaPredicted RBP3.62□□□□□ -1.83
ATXN3-227ENST00000554491 CLCF1Q9UBD9 225 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 LHX3Q9UBR4 397 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 PRNDQ9UKY0 176 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 MED31Q9Y3C7 131 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 FIS1Q9Y3D6 152 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 OARD1Q9Y530 152 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 LINC00312Q9Y6C7 94 aa3.62□□□□□ -1.83
ATXN3-227ENST00000554491 FN1P02751 2386 aaKnown RBP3.62□□□□□ -1.83
ATXN3-227ENST00000554491 TNRC6AQ8NDV7 1962 aaKnown RBP3.62□□□□□ -1.83
ATXN3-227ENST00000554491 RTTNQ86VV8 2226 aa3.61□□□□□ -1.83
ATXN3-227ENST00000554491 TRAV9-2A0A087WT02 112 aa3.61□□□□□ -1.83
ATXN3-227ENST00000554491 A0A0A6YYD5 115 aa3.61□□□□□ -1.83
ATXN3-227ENST00000554491 TRBV9A0A0B4J1U6 114 aa3.61□□□□□ -1.83
ATXN3-227ENST00000554491 FAM231BA6NCW3 169 aa3.61□□□□□ -1.83
ATXN3-227ENST00000554491 TMEM262E9PQX1 116 aa3.61□□□□□ -1.83
ATXN3-227ENST00000554491 FNDC10F2Z333 226 aa3.61□□□□□ -1.83
ATXN3-227ENST00000554491 C17orf112F2Z3M2 114 aa3.61□□□□□ -1.83
ATXN3-227ENST00000554491 MS4A18H0YCH9 400 aa3.61□□□□□ -1.83
ATXN3-227ENST00000554491 CCDC179H3BU77 68 aa3.61□□□□□ -1.83
ATXN3-227ENST00000554491 ENSAO43768 121 aaKnown RBP3.61□□□□□ -1.83
ATXN3-227ENST00000554491 ZNF253O75346 499 aa3.61□□□□□ -1.83
ATXN3-227ENST00000554491 ZNF682O95780 498 aa3.61□□□□□ -1.83
ATXN3-227ENST00000554491 ATP1B1P05026 303 aa3.61□□□□□ -1.83
ATXN3-227ENST00000554491 CSN3P07498 182 aa3.61□□□□□ -1.83
ATXN3-227ENST00000554491 PFN1P07737 140 aaKnown RBP3.61□□□□□ -1.83
ATXN3-227ENST00000554491 SRP19P09132 144 aaKnown RBP3.61□□□□□ -1.83
ATXN3-227ENST00000554491 SCTP09683 121 aa3.61□□□□□ -1.83
ATXN3-227ENST00000554491 TACSTD2P09758 323 aa3.61□□□□□ -1.83
ATXN3-227ENST00000554491 DANCRP0C864 163 aa3.61□□□□□ -1.83
ATXN3-227ENST00000554491 ZNF43P17038 809 aa3.61□□□□□ -1.83
ATXN3-227ENST00000554491 OPRM1P35372 400 aa3.61□□□□□ -1.83
ATXN3-227ENST00000554491 IER3P46695 156 aa3.61□□□□□ -1.83
ATXN3-227ENST00000554491 OR1E2P47887 323 aa3.61□□□□□ -1.83
ATXN3-227ENST00000554491 REG1BP48304 166 aa3.61□□□□□ -1.83
ATXN3-227ENST00000554491 FABP6P51161 128 aa3.61□□□□□ -1.83
ATXN3-227ENST00000554491 XGP55808 180 aa3.61□□□□□ -1.83
ATXN3-227ENST00000554491 NDUFV3P56181 108 aaKnown RBP3.61□□□□□ -1.83
ATXN3-227ENST00000554491 UBE2MP61081 183 aaKnown RBP3.61□□□□□ -1.83
ATXN3-227ENST00000554491 RPS15AP62244 130 aaKnown RBP3.61□□□□□ -1.83
ATXN3-227ENST00000554491 GNG5P63218 68 aa3.61□□□□□ -1.83
ATXN3-227ENST00000554491 EWSR1Q01844 656 aaKnown RBP eCLIP3.61□□□□□ -1.83
ATXN3-227ENST00000554491 SSBP1Q04837 148 aaKnown RBP3.61□□□□□ -1.83
ATXN3-227ENST00000554491 IL13RA2Q14627 380 aa3.61□□□□□ -1.83
ATXN3-227ENST00000554491 KIAA0040Q15053 153 aa3.61□□□□□ -1.83
ATXN3-227ENST00000554491 MSMO1Q15800 293 aa3.61□□□□□ -1.83
ATXN3-227ENST00000554491 TAL2Q16559 108 aa3.61□□□□□ -1.83
ATXN3-227ENST00000554491 RPEL1Q2QD12 228 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms