RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 PUSL1Q8N0Z8 303 aaKnown RBP4.97□□□□□ -1.61
SCFD1-212ENST00000554486 C12orf45Q8N5I9 185 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-212ENST00000554486 SLC35G3Q8N808 338 aa4.97□□□□□ -1.61
SCFD1-212ENST00000554486 Q8N9W7 124 aa4.97□□□□□ -1.61
SCFD1-212ENST00000554486 TEX45Q8NA69 505 aa4.97□□□□□ -1.61
SCFD1-212ENST00000554486 NPBQ8NG41 125 aa4.97□□□□□ -1.61
SCFD1-212ENST00000554486 SSMEM1Q8WWF3 244 aa4.97□□□□□ -1.61
SCFD1-212ENST00000554486 GPR146Q96CH1 333 aa4.97□□□□□ -1.61
SCFD1-212ENST00000554486 RBM14Q96PK6 669 aaKnown RBP4.97□□□□□ -1.61
SCFD1-212ENST00000554486 TSNAXQ99598 290 aaKnown RBP4.97□□□□□ -1.61
SCFD1-212ENST00000554486 PHB2Q99623 299 aa4.97□□□□□ -1.61
SCFD1-212ENST00000554486 RNF5Q99942 180 aa4.97□□□□□ -1.61
SCFD1-212ENST00000554486 GPN1Q9HCN4 374 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-212ENST00000554486 PPP1R14DQ9NXH3 145 aa4.97□□□□□ -1.61
SCFD1-212ENST00000554486 SHPKQ9UHJ6 478 aa4.97□□□□□ -1.61
SCFD1-212ENST00000554486 SETD2Q9BYW2 2564 aaPredicted RBP4.97□□□□□ -1.61
SCFD1-212ENST00000554486 C2CD3Q4AC94 2353 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 TRAV3A0A0B4J244 114 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 DUXBA0A1W2PPF3 345 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 MPTX1A8MV57 137 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 CCSO14618 274 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 NBR2O15453 112 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 ADAP1O75689 374 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 OR2F2O95006 317 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 OR2A4O95047 310 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 HRASP01112 189 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 HOXB5P09067 269 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 OR9G9P0C7N8 305 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 VDAC1P21796 283 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 UBE2KP61086 200 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 ERVK-16P61578 105 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 PJVKQ0ZLH3 352 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 SCGB2A2Q13296 93 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 MMDQ15546 238 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 TWIST1Q15672 202 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 C5orf64Q2M2E5 130 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 GGNBP1Q5YKI7 109 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 OR4A47Q6IF82 309 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 FAM71E2Q8N5Q1 922 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 TMEM86BQ8N661 226 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 C5orf56Q8N8D9 126 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 UXS1Q8NBZ7 420 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 DMBX1Q8NFW5 382 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 OR5R1Q8NH85 324 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 COQ8AQ8NI60 647 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 TMEM167AQ8TBQ9 72 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 LSM10Q969L4 123 aaKnown RBP4.96□□□□□ -1.62
SCFD1-212ENST00000554486 DUX5Q96PT3 197 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 OR2A7Q96R45 310 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 SLC25A33Q9BSK2 321 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 CHIAQ9BZP6 476 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 FBXL15Q9H469 300 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 RAB18Q9NP72 206 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 TNFRSF19Q9NS68 423 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 BET1LQ9NYM9 111 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 KIAA1456Q9P272 454 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 VPREB3Q9UKI3 123 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 SIGLEC9Q9Y336 463 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 POMT1Q9Y6A1 747 aa4.96□□□□□ -1.62
SCFD1-212ENST00000554486 BTBD17A6NE02 478 aa4.95□□□□□ -1.62
SCFD1-212ENST00000554486 NCBP2LA6PVI3 153 aaKnown RBP4.95□□□□□ -1.62
SCFD1-212ENST00000554486 UPK2O00526 184 aa4.95□□□□□ -1.62
SCFD1-212ENST00000554486 FCN1O00602 326 aa4.95□□□□□ -1.62
SCFD1-212ENST00000554486 SSNA1O43805 119 aa4.95□□□□□ -1.62
SCFD1-212ENST00000554486 ATG12O94817 140 aa4.95□□□□□ -1.62
SCFD1-212ENST00000554486 KBTBD11O94819 623 aa4.95□□□□□ -1.62
SCFD1-212ENST00000554486 SIX6O95475 246 aa4.95□□□□□ -1.62
SCFD1-212ENST00000554486 SULT1A3P0DMM9 295 aa4.95□□□□□ -1.62
SCFD1-212ENST00000554486 SULT1A4P0DMN0 295 aa4.95□□□□□ -1.62
SCFD1-212ENST00000554486 MYOD1P15172 320 aa4.95□□□□□ -1.62
SCFD1-212ENST00000554486 HLA-GP17693 338 aa4.95□□□□□ -1.62
SCFD1-212ENST00000554486 AKR1C2P52895 323 aa4.95□□□□□ -1.62
SCFD1-212ENST00000554486 RRAS2P62070 204 aaPredicted RBP4.95□□□□□ -1.62
SCFD1-212ENST00000554486 FCN2Q15485 313 aa4.95□□□□□ -1.62
SCFD1-212ENST00000554486 PRSS8Q16651 343 aa4.95□□□□□ -1.62
SCFD1-212ENST00000554486 VMA21Q3ZAQ7 101 aa4.95□□□□□ -1.62
SCFD1-212ENST00000554486 SERTAD4-AS1Q5TG53 156 aa4.95□□□□□ -1.62
SCFD1-212ENST00000554486 Q6ZSV7 163 aa4.95□□□□□ -1.62
SCFD1-212ENST00000554486 H2BFWTQ7Z2G1 175 aa4.95□□□□□ -1.62
SCFD1-212ENST00000554486 C16orf82Q7Z2V1 217 aa4.95□□□□□ -1.62
SCFD1-212ENST00000554486 FAM219AQ8IW50 185 aa4.95□□□□□ -1.62
SCFD1-212ENST00000554486 NEXN-AS1Q8NBZ9 246 aa4.95□□□□□ -1.62
SCFD1-212ENST00000554486 OR11H7Q8NGC8 314 aa4.95□□□□□ -1.62
SCFD1-212ENST00000554486 OR8H1Q8NGG4 311 aa4.95□□□□□ -1.62
SCFD1-212ENST00000554486 RNASE11Q8TAA1 199 aaKnown RBP4.95□□□□□ -1.62
SCFD1-212ENST00000554486 ZNF418Q8TF45 676 aaPredicted RBP4.95□□□□□ -1.62
SCFD1-212ENST00000554486 RRNAD1Q96FB5 475 aaKnown RBP4.95□□□□□ -1.62
SCFD1-212ENST00000554486 NPFFR1Q9GZQ6 430 aa4.95□□□□□ -1.62
SCFD1-212ENST00000554486 C1RLQ9NZP8 487 aa4.95□□□□□ -1.62
SCFD1-212ENST00000554486 METTL1Q9UBP6 276 aaKnown RBP4.95□□□□□ -1.62
SCFD1-212ENST00000554486 CACNG5Q9UF02 275 aa4.95□□□□□ -1.62
SCFD1-212ENST00000554486 PITPNC1Q9UKF7 332 aa4.95□□□□□ -1.62
SCFD1-212ENST00000554486 NSG2Q9Y328 171 aa4.95□□□□□ -1.62
SCFD1-212ENST00000554486 MOB4Q9Y3A3 225 aa4.95□□□□□ -1.62
SCFD1-212ENST00000554486 TMED3Q9Y3Q3 217 aa4.95□□□□□ -1.62
SCFD1-212ENST00000554486 MMP24Q9Y5R2 645 aa4.95□□□□□ -1.62
SCFD1-212ENST00000554486 IGHV7-81A0A0B4J1V7 117 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 PIGBOS1A0A0B4J2F0 54 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 A0A1B0GU03 582 aa4.94□□□□□ -1.62
SCFD1-212ENST00000554486 A0A1B0GW64 132 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms