RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 MRGPRG-AS1Q2M3A8 158 aa10.12□□□□□ -0.79
SHMT2-211ENST00000554310 C9orf66Q5T8R8 295 aa10.12□□□□□ -0.79
SHMT2-211ENST00000554310 ASPHD1Q5U4P2 390 aa10.12□□□□□ -0.79
SHMT2-211ENST00000554310 ACOT7LQ6ZUV0 252 aa10.12□□□□□ -0.79
SHMT2-211ENST00000554310 MMD2Q8IY49 270 aa10.12□□□□□ -0.79
SHMT2-211ENST00000554310 LRTM2Q8N967 370 aa10.12□□□□□ -0.79
SHMT2-211ENST00000554310 SRSF12Q8WXF0 261 aaKnown RBP10.12□□□□□ -0.79
SHMT2-211ENST00000554310 ARL6Q9H0F7 186 aa10.12□□□□□ -0.79
SHMT2-211ENST00000554310 LINC00862A6NCI5 91 aa10.11□□□□□ -0.79
SHMT2-211ENST00000554310 TNFSF12O43508 249 aa10.11□□□□□ -0.79
SHMT2-211ENST00000554310 ADAP1O75689 374 aa10.11□□□□□ -0.79
SHMT2-211ENST00000554310 B3GALNT1O75752 331 aa10.11□□□□□ -0.79
SHMT2-211ENST00000554310 KBTBD11O94819 623 aa10.11□□□□□ -0.79
SHMT2-211ENST00000554310 CFDP00746 253 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-211ENST00000554310 HRASP01112 189 aa10.11□□□□□ -0.79
SHMT2-211ENST00000554310 KRTAP10-11P60412 298 aa10.11□□□□□ -0.79
SHMT2-211ENST00000554310 TMEM187Q14656 261 aa10.11□□□□□ -0.79
SHMT2-211ENST00000554310 CLLU1Q5K131 121 aa10.11□□□□□ -0.79
SHMT2-211ENST00000554310 MS4A10Q96PG2 267 aa10.11□□□□□ -0.79
SHMT2-211ENST00000554310 ZNF430Q9H8G1 570 aaPredicted RBP10.11□□□□□ -0.79
SHMT2-211ENST00000554310 SLC2A9Q9NRM0 540 aa10.11□□□□□ -0.79
SHMT2-211ENST00000554310 ZNF355PQ9NSJ1 428 aa10.11□□□□□ -0.79
SHMT2-211ENST00000554310 A0A0G2JLM5 398 aa10.1□□□□□ -0.79
SHMT2-211ENST00000554310 RPS10-NUDT3A0A1W2PQS6 291 aa10.1□□□□□ -0.79
SHMT2-211ENST00000554310 SEC14L6B5MCN3 397 aa10.1□□□□□ -0.79
SHMT2-211ENST00000554310 LINC01619G3V211 115 aa10.1□□□□□ -0.79
SHMT2-211ENST00000554310 MPPED1O15442 326 aa10.1□□□□□ -0.79
SHMT2-211ENST00000554310 IFNA21P01568 189 aa10.1□□□□□ -0.79
SHMT2-211ENST00000554310 IGHV3-11P01762 117 aa10.1□□□□□ -0.79
SHMT2-211ENST00000554310 BRWD1-AS2P59051 145 aa10.1□□□□□ -0.79
SHMT2-211ENST00000554310 SRPXP78539 464 aa10.1□□□□□ -0.79
SHMT2-211ENST00000554310 LRRC37A5PQ49AS3 106 aa10.1□□□□□ -0.79
SHMT2-211ENST00000554310 PRSS54Q6PEW0 395 aa10.1□□□□□ -0.79
SHMT2-211ENST00000554310 ZNF818PQ6ZRF7 136 aa10.1□□□□□ -0.79
SHMT2-211ENST00000554310 SLC51BQ86UW2 128 aa10.1□□□□□ -0.79
SHMT2-211ENST00000554310 SPAG16Q8N0X2 631 aa10.1□□□□□ -0.79
SHMT2-211ENST00000554310 PUSL1Q8N0Z8 303 aaKnown RBP10.1□□□□□ -0.79
SHMT2-211ENST00000554310 OR5T1Q8NG75 326 aa10.1□□□□□ -0.79
SHMT2-211ENST00000554310 TMEM167AQ8TBQ9 72 aa10.1□□□□□ -0.79
SHMT2-211ENST00000554310 OR10C1Q96KK4 312 aa10.1□□□□□ -0.79
SHMT2-211ENST00000554310 RHOVQ96L33 236 aa10.1□□□□□ -0.79
SHMT2-211ENST00000554310 GPHA2Q96T91 129 aa10.1□□□□□ -0.79
SHMT2-211ENST00000554310 SPIN2AQ99865 258 aa10.1□□□□□ -0.79
SHMT2-211ENST00000554310 SPIN2BQ9BPZ2 258 aa10.1□□□□□ -0.79
SHMT2-211ENST00000554310 AIFM2Q9BRQ8 373 aa10.1□□□□□ -0.79
SHMT2-211ENST00000554310 COA4Q9NYJ1 87 aa10.1□□□□□ -0.79
SHMT2-211ENST00000554310 PRR13Q9NZ81 148 aa10.1□□□□□ -0.79
SHMT2-211ENST00000554310 MBD2Q9UBB5 411 aa10.1□□□□□ -0.79
SHMT2-211ENST00000554310 IGHV4OR15-8A0A075B7B6 117 aa10.09□□□□□ -0.79
SHMT2-211ENST00000554310 A0A087WW49 117 aa10.09□□□□□ -0.79
SHMT2-211ENST00000554310 KANTRA0A1W2PQU2 76 aa10.09□□□□□ -0.79
SHMT2-211ENST00000554310 RNF222A6NCQ9 220 aa10.09□□□□□ -0.79
SHMT2-211ENST00000554310 MSGN1A6NI15 193 aa10.09□□□□□ -0.79
SHMT2-211ENST00000554310 K7EIL1 84 aa10.09□□□□□ -0.79
SHMT2-211ENST00000554310 GPR31O00270 319 aa10.09□□□□□ -0.79
SHMT2-211ENST00000554310 BCL2L11O43521 198 aa10.09□□□□□ -0.79
SHMT2-211ENST00000554310 RAMP3O60896 148 aa10.09□□□□□ -0.79
SHMT2-211ENST00000554310 HOXB5P09067 269 aa10.09□□□□□ -0.79
SHMT2-211ENST00000554310 OR5AC1P0C628 307 aa10.09□□□□□ -0.79
SHMT2-211ENST00000554310 OR9G9P0C7N8 305 aa10.09□□□□□ -0.79
SHMT2-211ENST00000554310 PET100P0DJ07 73 aa10.09□□□□□ -0.79
SHMT2-211ENST00000554310 MAS1LP35410 378 aa10.09□□□□□ -0.79
SHMT2-211ENST00000554310 INSL3P51460 131 aa10.09□□□□□ -0.79
SHMT2-211ENST00000554310 PHLDA2Q53GA4 152 aa10.09□□□□□ -0.79
SHMT2-211ENST00000554310 VKORC1L1Q8N0U8 176 aa10.09□□□□□ -0.79
SHMT2-211ENST00000554310 LGI3Q8N145 548 aa10.09□□□□□ -0.79
SHMT2-211ENST00000554310 INO80EQ8NBZ0 244 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-211ENST00000554310 CD300LFQ8TDQ1 290 aa10.09□□□□□ -0.79
SHMT2-211ENST00000554310 RNF126Q9BV68 326 aa10.09□□□□□ -0.79
SHMT2-211ENST00000554310 OVOL1O14753 267 aa10.08□□□□□ -0.8
SHMT2-211ENST00000554310 HPRT1P00492 218 aa10.08□□□□□ -0.8
SHMT2-211ENST00000554310 HSPB1P04792 205 aaKnown RBP10.08□□□□□ -0.8
SHMT2-211ENST00000554310 GNRHRP30968 328 aa10.08□□□□□ -0.8
SHMT2-211ENST00000554310 RAB14P61106 215 aa10.08□□□□□ -0.8
SHMT2-211ENST00000554310 C10orf55Q5SWW7 151 aa10.08□□□□□ -0.8
SHMT2-211ENST00000554310 GGNBP1Q5YKI7 109 aa10.08□□□□□ -0.8
SHMT2-211ENST00000554310 CMTM1Q8IZ96 169 aa10.08□□□□□ -0.8
SHMT2-211ENST00000554310 OR51H1Q8NH63 302 aa10.08□□□□□ -0.8
SHMT2-211ENST00000554310 OR4A5Q8NH83 315 aa10.08□□□□□ -0.8
SHMT2-211ENST00000554310 SCARB1Q8WTV0 552 aa10.08□□□□□ -0.8
SHMT2-211ENST00000554310 GLYATL2Q8WU03 294 aa10.08□□□□□ -0.8
SHMT2-211ENST00000554310 DCUN1D4Q92564 292 aa10.08□□□□□ -0.8
SHMT2-211ENST00000554310 USMG5Q96IX5 58 aa10.08□□□□□ -0.8
SHMT2-211ENST00000554310 BET1LQ9NYM9 111 aa10.08□□□□□ -0.8
SHMT2-211ENST00000554310 C3orf85A0A1B0GTC6 90 aa10.07□□□□□ -0.8
SHMT2-211ENST00000554310 DUXBA0A1W2PPF3 345 aa10.07□□□□□ -0.8
SHMT2-211ENST00000554310 WI2-2373I1.2A0A1W2PRP0 233 aa10.07□□□□□ -0.8
SHMT2-211ENST00000554310 MPTX1A8MV57 137 aa10.07□□□□□ -0.8
SHMT2-211ENST00000554310 H0YIZ8 118 aa10.07□□□□□ -0.8
SHMT2-211ENST00000554310 FGF2P09038 288 aa10.07□□□□□ -0.8
SHMT2-211ENST00000554310 APELAP0DMC3 54 aa10.07□□□□□ -0.8
SHMT2-211ENST00000554310 NQO2P16083 231 aa10.07□□□□□ -0.8
SHMT2-211ENST00000554310 ZP3P21754 424 aa10.07□□□□□ -0.8
SHMT2-211ENST00000554310 NUP62P37198 522 aaPredicted RBP10.07□□□□□ -0.8
SHMT2-211ENST00000554310 RPL27AP46776 148 aaKnown RBP10.07□□□□□ -0.8
SHMT2-211ENST00000554310 SLURP1P55000 103 aa10.07□□□□□ -0.8
SHMT2-211ENST00000554310 RPL8P62917 257 aaKnown RBP10.07□□□□□ -0.8
SHMT2-211ENST00000554310 POU2AF1Q16633 256 aa10.07□□□□□ -0.8
SHMT2-211ENST00000554310 IAH1Q2TAA2 248 aaPredicted RBP10.07□□□□□ -0.8
SHMT2-211ENST00000554310 OR4A47Q6IF82 309 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms