RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 C1orf162Q8NEQ5 155 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-207ENST00000553837 PRSS33Q8NF86 280 aa10.12□□□□□ -0.79
SHMT2-207ENST00000553837 SARAFQ96BY9 339 aa10.12□□□□□ -0.79
SHMT2-207ENST00000553837 SFXN3Q9BWM7 321 aa10.12□□□□□ -0.79
SHMT2-207ENST00000553837 OR2D2Q9H210 308 aa10.12□□□□□ -0.79
SHMT2-207ENST00000553837 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.12□□□□□ -0.79
SHMT2-207ENST00000553837 AKAP13Q12802 2813 aa10.11□□□□□ -0.79
SHMT2-207ENST00000553837 TRAV34A0A0B4J273 112 aa10.11□□□□□ -0.79
SHMT2-207ENST00000553837 A0A1W2PS18 150 aa10.11□□□□□ -0.79
SHMT2-207ENST00000553837 SSTR5P35346 364 aa10.11□□□□□ -0.79
SHMT2-207ENST00000553837 SCGB2A2Q13296 93 aa10.11□□□□□ -0.79
SHMT2-207ENST00000553837 PMCHL1Q16048 86 aa10.11□□□□□ -0.79
SHMT2-207ENST00000553837 COX19Q49B96 90 aa10.11□□□□□ -0.79
SHMT2-207ENST00000553837 LRRC10Q5BKY1 277 aa10.11□□□□□ -0.79
SHMT2-207ENST00000553837 SLC35E4Q6ICL7 350 aa10.11□□□□□ -0.79
SHMT2-207ENST00000553837 RPRMLQ8N4K4 120 aa10.11□□□□□ -0.79
SHMT2-207ENST00000553837 OR13A1Q8NGR1 328 aa10.11□□□□□ -0.79
SHMT2-207ENST00000553837 USF3Q68DE3 2245 aa10.11□□□□□ -0.79
SHMT2-207ENST00000553837 IGHV2-26A0A0B4J1V2 119 aa10.11□□□□□ -0.79
SHMT2-207ENST00000553837 LRRC30A6NM36 301 aa10.11□□□□□ -0.79
SHMT2-207ENST00000553837 SLC17A3O00476 420 aa10.11□□□□□ -0.79
SHMT2-207ENST00000553837 DEFA4P12838 97 aa10.11□□□□□ -0.79
SHMT2-207ENST00000553837 MMD2Q8IY49 270 aa10.11□□□□□ -0.79
SHMT2-207ENST00000553837 CD177Q8N6Q3 437 aa10.11□□□□□ -0.79
SHMT2-207ENST00000553837 ZNF645Q8N7E2 425 aa10.11□□□□□ -0.79
SHMT2-207ENST00000553837 BORCS7Q96B45 105 aa10.11□□□□□ -0.79
SHMT2-207ENST00000553837 GALMQ96C23 342 aa10.11□□□□□ -0.79
SHMT2-207ENST00000553837 TMEM204Q9BSN7 226 aa10.11□□□□□ -0.79
SHMT2-207ENST00000553837 MEGF9Q9H1U4 602 aa10.11□□□□□ -0.79
SHMT2-207ENST00000553837 LY96Q9Y6Y9 160 aa10.11□□□□□ -0.79
SHMT2-207ENST00000553837 ZNF292O60281 2723 aa10.1□□□□□ -0.79
SHMT2-207ENST00000553837 DOCK11Q5JSL3 2073 aa10.1□□□□□ -0.79
SHMT2-207ENST00000553837 IGHV3-43A0A0B4J1X8 118 aa10.1□□□□□ -0.79
SHMT2-207ENST00000553837 TRAV38-1A0A0B4J264 116 aa10.1□□□□□ -0.79
SHMT2-207ENST00000553837 C17orf98A8MV24 154 aa10.1□□□□□ -0.79
SHMT2-207ENST00000553837 ZNF324O75467 553 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-207ENST00000553837 CEACAM4O75871 244 aa10.1□□□□□ -0.79
SHMT2-207ENST00000553837 P0C879 139 aa10.1□□□□□ -0.79
SHMT2-207ENST00000553837 C3orf79P0CE67 100 aa10.1□□□□□ -0.79
SHMT2-207ENST00000553837 IGHV3-43DP0DP04 118 aa10.1□□□□□ -0.79
SHMT2-207ENST00000553837 PMCHP20382 165 aa10.1□□□□□ -0.79
SHMT2-207ENST00000553837 ZNF83P51522 516 aa10.1□□□□□ -0.79
SHMT2-207ENST00000553837 ZNF816Q0VGE8 651 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-207ENST00000553837 TCF15Q12870 199 aa10.1□□□□□ -0.79
SHMT2-207ENST00000553837 STUMQ69YW2 141 aa10.1□□□□□ -0.79
SHMT2-207ENST00000553837 RFESDQ8TAC1 157 aa10.1□□□□□ -0.79
SHMT2-207ENST00000553837 KCNIP1Q9NZI2 227 aa10.1□□□□□ -0.79
SHMT2-207ENST00000553837 NAT8BQ9UHF3 227 aa10.1□□□□□ -0.79
SHMT2-207ENST00000553837 HEATR1Q9H583 2144 aaKnown RBP10.1□□□□□ -0.79
SHMT2-207ENST00000553837 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-207ENST00000553837 SCO2A0A1W2PP80 73 aa10.09□□□□□ -0.79
SHMT2-207ENST00000553837 OOEPA6NGQ2 149 aa10.09□□□□□ -0.79
SHMT2-207ENST00000553837 S1PR2O95136 353 aa10.09□□□□□ -0.79
SHMT2-207ENST00000553837 CXorf1O96002 111 aa10.09□□□□□ -0.79
SHMT2-207ENST00000553837 G6PCP35575 357 aa10.09□□□□□ -0.79
SHMT2-207ENST00000553837 FAM71F2Q6NXP2 309 aa10.09□□□□□ -0.79
SHMT2-207ENST00000553837 Q6ZVH6 145 aa10.09□□□□□ -0.79
SHMT2-207ENST00000553837 PRR7Q8TB68 274 aa10.09□□□□□ -0.79
SHMT2-207ENST00000553837 WFDC12Q8WWY7 111 aa10.09□□□□□ -0.79
SHMT2-207ENST00000553837 WNT10AQ9GZT5 417 aa10.09□□□□□ -0.79
SHMT2-207ENST00000553837 SLC25A15Q9Y619 301 aa10.09□□□□□ -0.79
SHMT2-207ENST00000553837 IGLC7A0M8Q6 106 aa10.09□□□□□ -0.79
SHMT2-207ENST00000553837 DEFB108AA8MXU0 73 aa10.09□□□□□ -0.79
SHMT2-207ENST00000553837 J3QR06 171 aa10.09□□□□□ -0.79
SHMT2-207ENST00000553837 PSG1P11464 419 aa10.09□□□□□ -0.79
SHMT2-207ENST00000553837 ZNF718Q3SXZ3 478 aa10.09□□□□□ -0.79
SHMT2-207ENST00000553837 MBNL2Q5VZF2 373 aaKnown RBP10.09□□□□□ -0.79
SHMT2-207ENST00000553837 ZNF596Q8TC21 504 aa10.09□□□□□ -0.79
SHMT2-207ENST00000553837 PROCRQ9UNN8 238 aa10.09□□□□□ -0.79
SHMT2-207ENST00000553837 LINC00473A8K010 186 aa10.08□□□□□ -0.8
SHMT2-207ENST00000553837 C9JCJ5 164 aa10.08□□□□□ -0.8
SHMT2-207ENST00000553837 K7EM74 188 aa10.08□□□□□ -0.8
SHMT2-207ENST00000553837 K7EN84 100 aa10.08□□□□□ -0.8
SHMT2-207ENST00000553837 ZG16O60844 167 aa10.08□□□□□ -0.8
SHMT2-207ENST00000553837 NBL1P41271 181 aa10.08□□□□□ -0.8
SHMT2-207ENST00000553837 Q5PR19 223 aa10.08□□□□□ -0.8
SHMT2-207ENST00000553837 SAMD13Q5VXD3 122 aa10.08□□□□□ -0.8
SHMT2-207ENST00000553837 ST6GALNAC3Q8NDV1 305 aa10.08□□□□□ -0.8
SHMT2-207ENST00000553837 LRRC29Q8WV35 223 aa10.08□□□□□ -0.8
SHMT2-207ENST00000553837 ZNF48Q96MX3 618 aaPredicted RBP10.08□□□□□ -0.8
SHMT2-207ENST00000553837 WDR83OSQ9Y284 106 aa10.08□□□□□ -0.8
SHMT2-207ENST00000553837 SMG1Q96Q15 3661 aaKnown RBP10.08□□□□□ -0.8
SHMT2-207ENST00000553837 CADP27708 2225 aa10.08□□□□□ -0.8
SHMT2-207ENST00000553837 TM4SF5O14894 197 aa10.08□□□□□ -0.8
SHMT2-207ENST00000553837 MPDU1O75352 247 aa10.08□□□□□ -0.8
SHMT2-207ENST00000553837 ARL14EPLP0DKL9 152 aa10.08□□□□□ -0.8
SHMT2-207ENST00000553837 CD1BP29016 333 aa10.08□□□□□ -0.8
SHMT2-207ENST00000553837 EDDM3BP56851 147 aa10.08□□□□□ -0.8
SHMT2-207ENST00000553837 PAX2Q02962 417 aa10.08□□□□□ -0.8
SHMT2-207ENST00000553837 GCSAMLQ5JQS6 135 aa10.08□□□□□ -0.8
SHMT2-207ENST00000553837 ZNF474Q6S9Z5 364 aaPredicted RBP10.08□□□□□ -0.8
SHMT2-207ENST00000553837 TMEM108Q6UXF1 575 aa10.08□□□□□ -0.8
SHMT2-207ENST00000553837 OR8I2Q8N0Y5 310 aa10.08□□□□□ -0.8
SHMT2-207ENST00000553837 OR2Z1Q8NG97 314 aa10.08□□□□□ -0.8
SHMT2-207ENST00000553837 UHRF2Q96PU4 802 aa10.08□□□□□ -0.8
SHMT2-207ENST00000553837 PSG11Q9UQ72 335 aa10.08□□□□□ -0.8
SHMT2-207ENST00000553837 FAM215AQ9Y5M1 114 aa10.08□□□□□ -0.8
SHMT2-207ENST00000553837 IGKV1D-17A0A075B6S4 117 aa10.07□□□□□ -0.8
SHMT2-207ENST00000553837 TRAV9-2A0A087WT02 112 aa10.07□□□□□ -0.8
SHMT2-207ENST00000553837 TRGV10A0A0A0MS01 117 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms