RNA–Protein interactions for RNA: ENST00000553744.1

TMEM253-202, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-202ENST00000553744 TMEM268Q5VZI3 342 aa9.14□□□□□ -0.95
TMEM253-202ENST00000553744 DCUN1D4Q92564 292 aa9.14□□□□□ -0.95
TMEM253-202ENST00000553744 DLX4Q92988 240 aaPredicted RBP9.14□□□□□ -0.95
TMEM253-202ENST00000553744 PRR13Q9NZ81 148 aa9.14□□□□□ -0.95
TMEM253-202ENST00000553744 PEF1Q9UBV8 284 aaKnown RBP9.14□□□□□ -0.95
TMEM253-202ENST00000553744 DMRT1Q9Y5R6 373 aa9.14□□□□□ -0.95
TMEM253-202ENST00000553744 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.13□□□□□ -0.95
TMEM253-202ENST00000553744 OVOL1O14753 267 aa9.13□□□□□ -0.95
TMEM253-202ENST00000553744 CYB5BO43169 146 aa9.13□□□□□ -0.95
TMEM253-202ENST00000553744 ST8SIA3O43173 380 aa9.13□□□□□ -0.95
TMEM253-202ENST00000553744 NDUFB6O95139 128 aa9.13□□□□□ -0.95
TMEM253-202ENST00000553744 NDUFB8O95169 186 aa9.13□□□□□ -0.95
TMEM253-202ENST00000553744 ZP3P21754 424 aa9.13□□□□□ -0.95
TMEM253-202ENST00000553744 SRPXP78539 464 aa9.13□□□□□ -0.95
TMEM253-202ENST00000553744 FAM209BQ5JX69 171 aa9.13□□□□□ -0.95
TMEM253-202ENST00000553744 C9orf66Q5T8R8 295 aa9.13□□□□□ -0.95
TMEM253-202ENST00000553744 CENPSQ8N2Z9 138 aa9.13□□□□□ -0.95
TMEM253-202ENST00000553744 SLC35G3Q8N808 338 aa9.13□□□□□ -0.95
TMEM253-202ENST00000553744 PLEKHA3Q9HB20 300 aa9.13□□□□□ -0.95
TMEM253-202ENST00000553744 F11RQ9Y624 299 aaKnown RBP9.13□□□□□ -0.95
TMEM253-202ENST00000553744 SEC14L6B5MCN3 397 aa9.12□□□□□ -0.95
TMEM253-202ENST00000553744 BMPR1BO00238 502 aa9.12□□□□□ -0.95
TMEM253-202ENST00000553744 VAMP1P23763 118 aa9.12□□□□□ -0.95
TMEM253-202ENST00000553744 MFAP2P55001 183 aa9.12□□□□□ -0.95
TMEM253-202ENST00000553744 UBE2MP61081 183 aaKnown RBP9.12□□□□□ -0.95
TMEM253-202ENST00000553744 PPP1R1AQ13522 171 aa9.12□□□□□ -0.95
TMEM253-202ENST00000553744 AARDQ4LEZ3 155 aa9.12□□□□□ -0.95
TMEM253-202ENST00000553744 SPINK9Q5DT21 86 aa9.12□□□□□ -0.95
TMEM253-202ENST00000553744 Q6ZRM9 215 aa9.12□□□□□ -0.95
TMEM253-202ENST00000553744 LGI3Q8N145 548 aa9.12□□□□□ -0.95
TMEM253-202ENST00000553744 OR2C3Q8N628 320 aa9.12□□□□□ -0.95
TMEM253-202ENST00000553744 ZNF114Q8NC26 417 aa9.12□□□□□ -0.95
TMEM253-202ENST00000553744 EEF1AKMT3Q96AZ1 226 aa9.12□□□□□ -0.95
TMEM253-202ENST00000553744 GPR146Q96CH1 333 aa9.12□□□□□ -0.95
TMEM253-202ENST00000553744 CXorf58Q96LI9 332 aa9.12□□□□□ -0.95
TMEM253-202ENST00000553744 CCDC140Q96MF4 163 aa9.12□□□□□ -0.95
TMEM253-202ENST00000553744 PDCD10Q9BUL8 212 aa9.12□□□□□ -0.95
TMEM253-202ENST00000553744 THYN1Q9P016 225 aa9.12□□□□□ -0.95
TMEM253-202ENST00000553744 CACNG5Q9UF02 275 aa9.12□□□□□ -0.95
TMEM253-202ENST00000553744 NOTCH3Q9UM47 2321 aa9.11□□□□□ -0.95
TMEM253-202ENST00000553744 A0A0B4J2A0 478 aa9.11□□□□□ -0.95
TMEM253-202ENST00000553744 PIGBOS1A0A0B4J2F0 54 aa9.11□□□□□ -0.95
TMEM253-202ENST00000553744 MFSD2BA6NFX1 497 aa9.11□□□□□ -0.95
TMEM253-202ENST00000553744 INS-IGF2F8WCM5 200 aa9.11□□□□□ -0.95
TMEM253-202ENST00000553744 PLA2G10O15496 165 aa9.11□□□□□ -0.95
TMEM253-202ENST00000553744 LYRM1O43325 122 aa9.11□□□□□ -0.95
TMEM253-202ENST00000553744 IFNA17P01571 189 aa9.11□□□□□ -0.95
TMEM253-202ENST00000553744 IGHV3-23P01764 117 aa9.11□□□□□ -0.95
TMEM253-202ENST00000553744 HOXA1P49639 335 aaPredicted RBP9.11□□□□□ -0.95
TMEM253-202ENST00000553744 EGFEM1PQ0D2K5 195 aa9.11□□□□□ -0.95
TMEM253-202ENST00000553744 RPEL1Q2QD12 228 aa9.11□□□□□ -0.95
TMEM253-202ENST00000553744 SLC25A24Q6NUK1 477 aa9.11□□□□□ -0.95
TMEM253-202ENST00000553744 OR1L6Q8NGR2 347 aa9.11□□□□□ -0.95
TMEM253-202ENST00000553744 OR1P1Q8NH06 330 aa9.11□□□□□ -0.95
TMEM253-202ENST00000553744 WDR12Q9GZL7 423 aaKnown RBP9.11□□□□□ -0.95
TMEM253-202ENST00000553744 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.11□□□□□ -0.95
TMEM253-202ENST00000553744 SHPKQ9UHJ6 478 aa9.11□□□□□ -0.95
TMEM253-202ENST00000553744 S4R3C0 116 aa9.11□□□□□ -0.95
TMEM253-202ENST00000553744 TRBV7-1A0A0A6YYK4 115 aa9.1□□□□□ -0.95
TMEM253-202ENST00000553744 DUXBA0A1W2PPF3 345 aa9.1□□□□□ -0.95
TMEM253-202ENST00000553744 PPP5D1E7EU14 171 aa9.1□□□□□ -0.95
TMEM253-202ENST00000553744 SFT2D2O95562 160 aa9.1□□□□□ -0.95
TMEM253-202ENST00000553744 SULT1A3P0DMM9 295 aa9.1□□□□□ -0.95
TMEM253-202ENST00000553744 SULT1A4P0DMN0 295 aa9.1□□□□□ -0.95
TMEM253-202ENST00000553744 INSL3P51460 131 aa9.1□□□□□ -0.95
TMEM253-202ENST00000553744 KRTAP10-11P60412 298 aa9.1□□□□□ -0.95
TMEM253-202ENST00000553744 SPCS3P61009 180 aa9.1□□□□□ -0.95
TMEM253-202ENST00000553744 ERHP84090 104 aaKnown RBP9.1□□□□□ -0.95
TMEM253-202ENST00000553744 KLF5Q13887 457 aaPredicted RBP9.1□□□□□ -0.95
TMEM253-202ENST00000553744 ZNF846Q147U1 533 aa9.1□□□□□ -0.95
TMEM253-202ENST00000553744 ANKRD55Q3KP44 614 aa9.1□□□□□ -0.95
TMEM253-202ENST00000553744 NMSQ5H8A3 153 aa9.1□□□□□ -0.95
TMEM253-202ENST00000553744 ACSM6Q6P461 480 aa9.1□□□□□ -0.95
TMEM253-202ENST00000553744 CLEC19AQ6UXS0 136 aa9.1□□□□□ -0.95
TMEM253-202ENST00000553744 LYZL2Q7Z4W2 148 aa9.1□□□□□ -0.95
TMEM253-202ENST00000553744 LRTM2Q8N967 370 aa9.1□□□□□ -0.95
TMEM253-202ENST00000553744 OR52E5Q8NH55 327 aa9.1□□□□□ -0.95
TMEM253-202ENST00000553744 ZNF502Q8TBZ5 544 aa9.1□□□□□ -0.95
TMEM253-202ENST00000553744 VN1R17PQ8TDU5 208 aa9.1□□□□□ -0.95
TMEM253-202ENST00000553744 FLVCR2Q9UPI3 526 aa9.1□□□□□ -0.95
TMEM253-202ENST00000553744 K7EIM0 57 aa9.09□□□□□ -0.95
TMEM253-202ENST00000553744 GGCTO75223 188 aaKnown RBP9.09□□□□□ -0.95
TMEM253-202ENST00000553744 SAP30O75446 220 aa9.09□□□□□ -0.95
TMEM253-202ENST00000553744 PRB2P02812 416 aaPredicted RBP9.09□□□□□ -0.95
TMEM253-202ENST00000553744 SYNJ2BPP57105 145 aa9.09□□□□□ -0.95
TMEM253-202ENST00000553744 REC114Q7Z4M0 266 aa9.09□□□□□ -0.95
TMEM253-202ENST00000553744 ENY2Q9NPA8 101 aa9.09□□□□□ -0.95
TMEM253-202ENST00000553744 AURKAIP1Q9NWT8 199 aaPredicted RBP9.09□□□□□ -0.95
TMEM253-202ENST00000553744 CACFD1Q9UGQ2 172 aa9.09□□□□□ -0.95
TMEM253-202ENST00000553744 C9orf170A2RU37 121 aa9.08□□□□□ -0.96
TMEM253-202ENST00000553744 HLA-AP01891 365 aaKnown RBP9.08□□□□□ -0.96
TMEM253-202ENST00000553744 ANXA7P20073 488 aaKnown RBP9.08□□□□□ -0.96
TMEM253-202ENST00000553744 GPR183P32249 361 aa9.08□□□□□ -0.96
TMEM253-202ENST00000553744 ARL3P36405 182 aa9.08□□□□□ -0.96
TMEM253-202ENST00000553744 SMCO1Q147U7 214 aa9.08□□□□□ -0.96
TMEM253-202ENST00000553744 TATDN3Q17R31 274 aa9.08□□□□□ -0.96
TMEM253-202ENST00000553744 OR9G4Q8NGQ1 327 aa9.08□□□□□ -0.96
TMEM253-202ENST00000553744 ATP6V0BQ99437 205 aa9.08□□□□□ -0.96
TMEM253-202ENST00000553744 ELOVL1Q9BW60 279 aa9.08□□□□□ -0.96
TMEM253-202ENST00000553744 C20orf85Q9H1P6 137 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms