RNA–Protein interactions for RNA: ENST00000553696.1

NEMF-202, Transcript of nuclear export mediator factor, humanhuman

TSL 3

Gene NEMF, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMF-202ENST00000553696 TRAPPC2LH3BP13 241 aa0.8□□□□□ -2.28
NEMF-202ENST00000553696 KPNA3O00505 521 aaPredicted RBP0.8□□□□□ -2.28
NEMF-202ENST00000553696 SLC22A1O15245 554 aa0.8□□□□□ -2.28
NEMF-202ENST00000553696 CIAO1O76071 339 aa0.8□□□□□ -2.28
NEMF-202ENST00000553696 RPP14O95059 124 aaKnown RBP0.8□□□□□ -2.28
NEMF-202ENST00000553696 PRM2P04554 102 aa0.8□□□□□ -2.28
NEMF-202ENST00000553696 HLA-DMBP28068 263 aa0.8□□□□□ -2.28
NEMF-202ENST00000553696 HOXA6P31267 233 aa0.8□□□□□ -2.28
NEMF-202ENST00000553696 FXYD2P54710 66 aa0.8□□□□□ -2.28
NEMF-202ENST00000553696 SNRPD2P62316 118 aaKnown RBP0.8□□□□□ -2.28
NEMF-202ENST00000553696 ACOT6Q3I5F7 207 aaPredicted RBP0.8□□□□□ -2.28
NEMF-202ENST00000553696 TMEM155Q4W5P6 130 aa0.8□□□□□ -2.28
NEMF-202ENST00000553696 FAM27BQ5VT28 67 aa0.8□□□□□ -2.28
NEMF-202ENST00000553696 SPOPLQ6IQ16 392 aa0.8□□□□□ -2.28
NEMF-202ENST00000553696 RPS19BP1Q86WX3 136 aaKnown RBP0.8□□□□□ -2.28
NEMF-202ENST00000553696 TRAPPC5Q8IUR0 188 aa0.8□□□□□ -2.28
NEMF-202ENST00000553696 CLDN22Q8N7P3 220 aa0.8□□□□□ -2.28
NEMF-202ENST00000553696 ZNF676Q8N7Q3 588 aa0.8□□□□□ -2.28
NEMF-202ENST00000553696 OR2T4Q8NH00 348 aa0.8□□□□□ -2.28
NEMF-202ENST00000553696 ERMAPQ96PL5 475 aaPredicted RBP0.8□□□□□ -2.28
NEMF-202ENST00000553696 COMMD5Q9GZQ3 224 aa0.8□□□□□ -2.28
NEMF-202ENST00000553696 CISHQ9NSE2 258 aa0.8□□□□□ -2.28
NEMF-202ENST00000553696 MED9Q9NWA0 146 aa0.8□□□□□ -2.28
NEMF-202ENST00000553696 FBN2P35556 2912 aa0.8□□□□□ -2.28
NEMF-202ENST00000553696 NUP155O75694 1391 aa0.8□□□□□ -2.28
NEMF-202ENST00000553696 TECTAO75443 2155 aa0.8□□□□□ -2.28
NEMF-202ENST00000553696 ARFGEF3Q5TH69 2177 aa0.8□□□□□ -2.28
NEMF-202ENST00000553696 MYOFQ9NZM1 2061 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 ZNF469Q96JG9 3925 aaPredicted RBP0.79□□□□□ -2.28
NEMF-202ENST00000553696 TGIF2-C20orf24A0A0A6YYL0 155 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 FABP5P3A8MUU1 101 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 MRPS14O60783 128 aaKnown RBP0.79□□□□□ -2.28
NEMF-202ENST00000553696 ZNF737O75373 536 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 LYPLA2O95372 231 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 IGKV1-5P01602 117 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 HLA-DRB1P01911 266 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 RPS17P08708 135 aaKnown RBP0.79□□□□□ -2.28
NEMF-202ENST00000553696 METTL15P1P0C7V9 234 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 TRGC1P0CF51 173 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 DEFA4P12838 97 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 GPX2P18283 190 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 HIST1H2BOP23527 126 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 HIST1H2BBP33778 126 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 CDKN2CP42773 168 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 ZNF80P51504 273 aaPredicted RBP0.79□□□□□ -2.28
NEMF-202ENST00000553696 HIST1H2BDP58876 126 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 HIST1H2BCP62807 126 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 RANP62826 216 aaKnown RBP0.79□□□□□ -2.28
NEMF-202ENST00000553696 CTAG1AP78358 180 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 PRB3Q04118 309 aaPredicted RBP0.79□□□□□ -2.28
NEMF-202ENST00000553696 STX5Q13190 355 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 ELOBQ15370 118 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 NNATQ16517 81 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 HIST2H2BEQ16778 126 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 SPANXN3Q5MJ09 141 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.79□□□□□ -2.28
NEMF-202ENST00000553696 AADACL3Q5VUY0 350 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 LPCAT3Q6P1A2 487 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 RPL22L1Q6P5R6 122 aaKnown RBP0.79□□□□□ -2.28
NEMF-202ENST00000553696 SLC36A1Q7Z2H8 476 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 OR13C4Q8NGS5 318 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 MCFD2Q8NI22 146 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 MBD3L1Q8WWY6 194 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 C11orf40Q8WZ69 217 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 KLK6Q92876 244 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 HIST1H2BHQ93079 126 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 PPP1R14BQ96C90 147 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 DCUN1D1Q96GG9 259 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 TSPAN32Q96QS1 320 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 HIST1H2BNQ99877 126 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 HIST1H2BMQ99879 126 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 DERL1Q9BUN8 251 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 CST9LQ9H4G1 147 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 CMTM6Q9NX76 183 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 FBXL12Q9NXK8 326 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 MRPL27Q9P0M9 148 aaKnown RBP0.79□□□□□ -2.28
NEMF-202ENST00000553696 SIPA1L1O43166 1804 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 MTUS2Q5JR59 1369 aa0.79□□□□□ -2.28
NEMF-202ENST00000553696 WRNQ14191 1432 aaPredicted RBP eCLIP0.79□□□□□ -2.28
NEMF-202ENST00000553696 PTPRSQ13332 1948 aa0.78□□□□□ -2.28
NEMF-202ENST00000553696 TRAPPC13A5PLN9 417 aa0.78□□□□□ -2.28
NEMF-202ENST00000553696 ORC5O43913 435 aa0.78□□□□□ -2.28
NEMF-202ENST00000553696 IFNA10P01566 189 aa0.78□□□□□ -2.28
NEMF-202ENST00000553696 TTRP02766 147 aa0.78□□□□□ -2.28
NEMF-202ENST00000553696 TCRBP04435 133 aa0.78□□□□□ -2.28
NEMF-202ENST00000553696 RPL5P46777 297 aaKnown RBP0.78□□□□□ -2.28
NEMF-202ENST00000553696 AQP4P55087 323 aa0.78□□□□□ -2.28
NEMF-202ENST00000553696 LSM6P62312 80 aaKnown RBP0.78□□□□□ -2.28
NEMF-202ENST00000553696 HBA1P69905 142 aa0.78□□□□□ -2.28
NEMF-202ENST00000553696 CCL7P80098 99 aa0.78□□□□□ -2.28
NEMF-202ENST00000553696 AESQ08117 197 aa0.78□□□□□ -2.28
NEMF-202ENST00000553696 PLCXD2Q0VAA5 305 aa0.78□□□□□ -2.28
NEMF-202ENST00000553696 EDDM3AQ14507 147 aa0.78□□□□□ -2.28
NEMF-202ENST00000553696 MOGQ16653 247 aa0.78□□□□□ -2.28
NEMF-202ENST00000553696 ARHGAP11BQ3KRB8 267 aa0.78□□□□□ -2.28
NEMF-202ENST00000553696 AKIRIN2Q53H80 203 aa0.78□□□□□ -2.28
NEMF-202ENST00000553696 C7orf65Q6ZTY9 151 aa0.78□□□□□ -2.28
NEMF-202ENST00000553696 DHFR2Q86XF0 187 aa0.78□□□□□ -2.28
NEMF-202ENST00000553696 RASSF5Q8WWW0 418 aa0.78□□□□□ -2.28
NEMF-202ENST00000553696 BORCS7Q96B45 105 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms