RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 H3BQ15 152 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 BUB1B-PAK6H3BSN5 160 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 M0R1W7 72 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 NUPL2O15504 423 aaKnown RBP4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 CA2P00918 260 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 MT-ND4LP03901 98 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 IFNA4P05014 189 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 PPIAL4GP0DN37 164 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 RNASE2P10153 161 aaKnown RBP4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 IGFBP2P18065 325 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 ATF4P18848 351 aaPredicted RBP4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 CHRNA7P36544 502 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 HOXA1P49639 335 aaPredicted RBP4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 RPS16P62249 146 aaKnown RBP4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 RPL8P62917 257 aaKnown RBP4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 ERHP84090 104 aaKnown RBP4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 PNRC1Q12796 327 aaPredicted RBP4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 RAB31Q13636 194 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 LY6DQ14210 128 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 HAGHQ16775 308 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 MRGPRG-AS1Q2M3A8 158 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 AWAT1Q58HT5 328 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 SPINK9Q5DT21 86 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 TMEM88Q6PEY1 159 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 TEPPQ6URK8 271 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 LCN15Q6UWW0 184 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 TGIF2LXQ8IUE1 241 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 CBLN2Q8IUK8 224 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 MRPL41Q8IXM3 137 aaKnown RBP4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 CYB561D1Q8N8Q1 229 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 OR8B3Q8NGG8 313 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 MALSU1Q96EH3 234 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 TVP23CQ96ET8 276 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 TIMD4Q96H15 378 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 HARBI1Q96MB7 349 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 YPEL4Q96NS1 127 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 OR8B2Q96RD0 313 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 MGST2Q99735 147 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 GGTLC1Q9BX51 225 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 CLEC7AQ9BXN2 247 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 CHODLQ9H9P2 273 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 PLEKHA3Q9HB20 300 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 PATZ1Q9HBE1 687 aaKnown RBP4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 SDF2L1Q9HCN8 221 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 RPS10P5Q9NQ39 176 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 SIRT7Q9NRC8 400 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 ZNRD1Q9P1U0 126 aa4.85□□□□□ -1.63
VIPAS39-204ENST00000553576 ANKHD1Q8IWZ3 2542 aaKnown RBP4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 A0A1B0GV50 99 aa4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 CGB1A6NKQ9 187 aa4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 A6NNC1 897 aa4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 LYNX1G3V0Z9 82 aa4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 M0R036 132 aa4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 YIF1AO95070 293 aa4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 LIPFP07098 398 aa4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 SOD3P08294 240 aa4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 SNRNP70P08621 437 aaKnown RBP4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 LINC00869P0C866 280 aa4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 STAG3L2P0CL84 134 aa4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 STAG3L3P0CL85 134 aa4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 LYNX1P0DP58 116 aa4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 CDC34P49427 236 aaPredicted RBP4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 COMPP49747 757 aaPredicted RBP4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 SUB1P53999 127 aaKnown RBP eCLIP4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 ELLP55199 621 aaPredicted RBP4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 CD81P60033 236 aa4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 FLI1Q01543 452 aaPredicted RBP4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 MEF2BQ02080 365 aaPredicted RBP4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 CD69Q07108 199 aa4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 DIAPH2-AS1Q14236 149 aa4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 HABP2Q14520 560 aaPredicted RBP4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 SSX2Q16385 188 aa4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 VMA21Q3ZAQ7 101 aa4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 ZNF114Q8NC26 417 aa4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 OR11H6Q8NGC7 330 aa4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 OR4P4Q8NGL7 312 aa4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 NANPQ8TBE9 248 aa4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 RNASEH2CQ8TDP1 164 aaKnown RBP4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 NIPSNAP3BQ9BS92 247 aa4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 COMMD5Q9GZQ3 224 aa4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 GNG13Q9P2W3 67 aa4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 SLC45A2Q9UMX9 530 aa4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 PRELID1Q9Y255 219 aa4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 AMMECR1Q9Y4X0 333 aaPredicted RBP4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 PXMP4Q9Y6I8 212 aa4.84□□□□□ -1.63
VIPAS39-204ENST00000553576 SPTBN1Q01082 2364 aaKnown RBP4.84□□□□□ -1.64
VIPAS39-204ENST00000553576 CEP295Q9C0D2 2601 aa4.83□□□□□ -1.64
VIPAS39-204ENST00000553576 IGHV1-3A0A0C4DH29 117 aa4.83□□□□□ -1.64
VIPAS39-204ENST00000553576 A0A1W2PPV4 95 aa4.83□□□□□ -1.64
VIPAS39-204ENST00000553576 ZFP92A6NM28 416 aa4.83□□□□□ -1.64
VIPAS39-204ENST00000553576 E7EUB6 86 aa4.83□□□□□ -1.64
VIPAS39-204ENST00000553576 TSPAN9O75954 239 aa4.83□□□□□ -1.64
VIPAS39-204ENST00000553576 CXorf1O96002 111 aa4.83□□□□□ -1.64
VIPAS39-204ENST00000553576 CRYBA1P05813 215 aa4.83□□□□□ -1.64
VIPAS39-204ENST00000553576 CRYGCP07315 174 aa4.83□□□□□ -1.64
VIPAS39-204ENST00000553576 FBP1P09467 338 aa4.83□□□□□ -1.64
VIPAS39-204ENST00000553576 PRTN3P24158 256 aa4.83□□□□□ -1.64
VIPAS39-204ENST00000553576 FGF8P55075 233 aaPredicted RBP4.83□□□□□ -1.64
VIPAS39-204ENST00000553576 B2MP61769 119 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms