RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 FAM24BQ8N5W8 94 aa6.59□□□□□ -1.35
SYNE2-209ENST00000553308 ZBTB34Q8NCN2 500 aa6.59□□□□□ -1.35
SYNE2-209ENST00000553308 BEST4Q8NFU0 473 aa6.59□□□□□ -1.35
SYNE2-209ENST00000553308 OR1L8Q8NGR8 309 aa6.59□□□□□ -1.35
SYNE2-209ENST00000553308 LSM10Q969L4 123 aaKnown RBP6.59□□□□□ -1.35
SYNE2-209ENST00000553308 OR10C1Q96KK4 312 aa6.59□□□□□ -1.35
SYNE2-209ENST00000553308 PLEKHA2Q9HB19 425 aa6.59□□□□□ -1.35
SYNE2-209ENST00000553308 NDUFA4L2Q9NRX3 87 aa6.59□□□□□ -1.35
SYNE2-209ENST00000553308 NSG2Q9Y328 171 aa6.59□□□□□ -1.35
SYNE2-209ENST00000553308 DNAH6Q9C0G6 4158 aa6.59□□□□□ -1.35
SYNE2-209ENST00000553308 MUC4Q99102 2169 aa6.58□□□□□ -1.36
SYNE2-209ENST00000553308 TRAV10A0A0B4J240 114 aa6.58□□□□□ -1.36
SYNE2-209ENST00000553308 MARCH11A6NNE9 402 aa6.58□□□□□ -1.36
SYNE2-209ENST00000553308 M0R2N4 97 aa6.58□□□□□ -1.36
SYNE2-209ENST00000553308 FCER2P06734 321 aa6.58□□□□□ -1.36
SYNE2-209ENST00000553308 GIG44P09565 113 aaPredicted RBP6.58□□□□□ -1.36
SYNE2-209ENST00000553308 RELQ04864 619 aaPredicted RBP6.58□□□□□ -1.36
SYNE2-209ENST00000553308 AADACL3Q5VUY0 350 aa6.58□□□□□ -1.36
SYNE2-209ENST00000553308 PVRIGQ6DKI7 326 aa6.58□□□□□ -1.36
SYNE2-209ENST00000553308 C22orf42Q6IC83 251 aa6.58□□□□□ -1.36
SYNE2-209ENST00000553308 PRSS48Q7RTY5 328 aa6.58□□□□□ -1.36
SYNE2-209ENST00000553308 TMEM17Q86X19 198 aa6.58□□□□□ -1.36
SYNE2-209ENST00000553308 LGALS14Q8TCE9 139 aa6.58□□□□□ -1.36
SYNE2-209ENST00000553308 GIMAP1Q8WWP7 306 aa6.58□□□□□ -1.36
SYNE2-209ENST00000553308 ST8SIA2Q92186 375 aa6.58□□□□□ -1.36
SYNE2-209ENST00000553308 CMTM3Q96MX0 182 aa6.58□□□□□ -1.36
SYNE2-209ENST00000553308 VCXQ9H320 206 aa6.58□□□□□ -1.36
SYNE2-209ENST00000553308 NDUFB11Q9NX14 153 aa6.58□□□□□ -1.36
SYNE2-209ENST00000553308 COMMD9Q9P000 198 aa6.58□□□□□ -1.36
SYNE2-209ENST00000553308 ELOA3CA0A087WX78 387 aaPredicted RBP6.57□□□□□ -1.36
SYNE2-209ENST00000553308 TRAV14DV4A0A0A6YYC5 116 aa6.57□□□□□ -1.36
SYNE2-209ENST00000553308 IGHV3-66A0A0C4DH42 116 aa6.57□□□□□ -1.36
SYNE2-209ENST00000553308 TRDV1A0A1B0GX56 115 aa6.57□□□□□ -1.36
SYNE2-209ENST00000553308 IGHV3-48P01763 117 aa6.57□□□□□ -1.36
SYNE2-209ENST00000553308 APOHP02749 345 aaPredicted RBP6.57□□□□□ -1.36
SYNE2-209ENST00000553308 C4BPBP20851 252 aa6.57□□□□□ -1.36
SYNE2-209ENST00000553308 AQP4P55087 323 aa6.57□□□□□ -1.36
SYNE2-209ENST00000553308 ERVK-16P61578 105 aa6.57□□□□□ -1.36
SYNE2-209ENST00000553308 PAFAH1B2P68402 229 aa6.57□□□□□ -1.36
SYNE2-209ENST00000553308 TBCEQ15813 527 aaPredicted RBP6.57□□□□□ -1.36
SYNE2-209ENST00000553308 ZNF767PQ75MW2 155 aa6.57□□□□□ -1.36
SYNE2-209ENST00000553308 ZNF367Q7RTV3 350 aa6.57□□□□□ -1.36
SYNE2-209ENST00000553308 ZNF575Q86XF7 245 aa6.57□□□□□ -1.36
SYNE2-209ENST00000553308 LILRB2Q8N423 598 aa6.57□□□□□ -1.36
SYNE2-209ENST00000553308 POM121L12Q8N7R1 296 aa6.57□□□□□ -1.36
SYNE2-209ENST00000553308 SLC25A46Q96AG3 418 aa6.57□□□□□ -1.36
SYNE2-209ENST00000553308 DGCR14Q96DF8 476 aaKnown RBP6.57□□□□□ -1.36
SYNE2-209ENST00000553308 MISP3Q96FF7 219 aa6.57□□□□□ -1.36
SYNE2-209ENST00000553308 RNF126Q9BV68 326 aa6.57□□□□□ -1.36
SYNE2-209ENST00000553308 SCRT1Q9BWW7 348 aa6.57□□□□□ -1.36
SYNE2-209ENST00000553308 MS4A6AQ9H2W1 248 aa6.57□□□□□ -1.36
SYNE2-209ENST00000553308 CELA1Q9UNI1 258 aa6.57□□□□□ -1.36
SYNE2-209ENST00000553308 OR51B2Q9Y5P1 312 aa6.57□□□□□ -1.36
SYNE2-209ENST00000553308 X6R8D5 127 aa6.57□□□□□ -1.36
SYNE2-209ENST00000553308 DBX1A6NMT0 343 aa6.56□□□□□ -1.36
SYNE2-209ENST00000553308 NOTOA8MTQ0 251 aa6.56□□□□□ -1.36
SYNE2-209ENST00000553308 ZNF705EA8MWA4 302 aaPredicted RBP6.56□□□□□ -1.36
SYNE2-209ENST00000553308 I3L2K1 104 aa6.56□□□□□ -1.36
SYNE2-209ENST00000553308 DNASE2O00115 360 aaPredicted RBP6.56□□□□□ -1.36
SYNE2-209ENST00000553308 ST8SIA3O43173 380 aa6.56□□□□□ -1.36
SYNE2-209ENST00000553308 SCGNO76038 276 aa6.56□□□□□ -1.36
SYNE2-209ENST00000553308 DFFBO76075 338 aa6.56□□□□□ -1.36
SYNE2-209ENST00000553308 KRASP01116 189 aa6.56□□□□□ -1.36
SYNE2-209ENST00000553308 AMBPP02760 352 aa6.56□□□□□ -1.36
SYNE2-209ENST00000553308 RLN1P04808 185 aa6.56□□□□□ -1.36
SYNE2-209ENST00000553308 EIF4EP06730 217 aaKnown RBP6.56□□□□□ -1.36
SYNE2-209ENST00000553308 MIFP14174 115 aa6.56□□□□□ -1.36
SYNE2-209ENST00000553308 G6PCP35575 357 aa6.56□□□□□ -1.36
SYNE2-209ENST00000553308 TRPT1Q86TN4 253 aaKnown RBP6.56□□□□□ -1.36
SYNE2-209ENST00000553308 HOGA1Q86XE5 327 aa6.56□□□□□ -1.36
SYNE2-209ENST00000553308 STHQ8IWL8 128 aa6.56□□□□□ -1.36
SYNE2-209ENST00000553308 OR1P1Q8NH06 330 aa6.56□□□□□ -1.36
SYNE2-209ENST00000553308 FCAMRQ8WWV6 532 aa6.56□□□□□ -1.36
SYNE2-209ENST00000553308 NXF2Q9GZY0 626 aaKnown RBP6.56□□□□□ -1.36
SYNE2-209ENST00000553308 VSIRQ9H7M9 311 aa6.56□□□□□ -1.36
SYNE2-209ENST00000553308 RHBDL2Q9NX52 303 aa6.56□□□□□ -1.36
SYNE2-209ENST00000553308 DAPK2Q9UIK4 370 aa6.56□□□□□ -1.36
SYNE2-209ENST00000553308 RYR1P21817 5038 aa6.55□□□□□ -1.36
SYNE2-209ENST00000553308 TRAV18A0A075B6X5 111 aa6.55□□□□□ -1.36
SYNE2-209ENST00000553308 DEFB131BA0A096LNP1 70 aa6.55□□□□□ -1.36
SYNE2-209ENST00000553308 KNCNA6PVL3 124 aa6.55□□□□□ -1.36
SYNE2-209ENST00000553308 EBAG9O00559 213 aa6.55□□□□□ -1.36
SYNE2-209ENST00000553308 SNAPC5O75971 98 aa6.55□□□□□ -1.36
SYNE2-209ENST00000553308 MT-CO2P00403 227 aa6.55□□□□□ -1.36
SYNE2-209ENST00000553308 GNRHRP30968 328 aa6.55□□□□□ -1.36
SYNE2-209ENST00000553308 LPAR6P43657 344 aa6.55□□□□□ -1.36
SYNE2-209ENST00000553308 MFAP4P55083 255 aa6.55□□□□□ -1.36
SYNE2-209ENST00000553308 RPL11P62913 178 aaKnown RBP6.55□□□□□ -1.36
SYNE2-209ENST00000553308 C12orf74Q32Q52 190 aa6.55□□□□□ -1.36
SYNE2-209ENST00000553308 TOMM20LQ6UXN7 152 aa6.55□□□□□ -1.36
SYNE2-209ENST00000553308 SLC25A38Q96DW6 304 aa6.55□□□□□ -1.36
SYNE2-209ENST00000553308 TMEM56Q96MV1 263 aa6.55□□□□□ -1.36
SYNE2-209ENST00000553308 GINS3Q9BRX5 216 aa6.55□□□□□ -1.36
SYNE2-209ENST00000553308 ZFAND3Q9H8U3 227 aa6.55□□□□□ -1.36
SYNE2-209ENST00000553308 CLEC5AQ9NY25 188 aa6.55□□□□□ -1.36
SYNE2-209ENST00000553308 RABAC1Q9UI14 185 aa6.55□□□□□ -1.36
SYNE2-209ENST00000553308 PKHD1P08F94 4074 aa6.54□□□□□ -1.36
SYNE2-209ENST00000553308 TRAV2A0A0B4J234 112 aa6.54□□□□□ -1.36
SYNE2-209ENST00000553308 MEIS3P1A6NDR6 274 aa6.54□□□□□ -1.36
SYNE2-209ENST00000553308 GNG7O60262 68 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms