RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 OR5H2Q8NGV7 314 aa8.5□□□□□ -1.05
NEK3-204ENST00000552973 FXYD6Q9H0Q3 95 aa8.5□□□□□ -1.05
NEK3-204ENST00000552973 IGHV3OR16-13A0A075B7E8 117 aa8.49□□□□□ -1.05
NEK3-204ENST00000552973 IGHV3-74A0A0B4J1X5 117 aa8.49□□□□□ -1.05
NEK3-204ENST00000552973 YIF1AO95070 293 aa8.49□□□□□ -1.05
NEK3-204ENST00000552973 IGHV3-48P01763 117 aa8.49□□□□□ -1.05
NEK3-204ENST00000552973 HLA-DMAP28067 261 aa8.49□□□□□ -1.05
NEK3-204ENST00000552973 RPS19P39019 145 aaKnown RBP8.49□□□□□ -1.05
NEK3-204ENST00000552973 TMEM69Q5SWH9 247 aa8.49□□□□□ -1.05
NEK3-204ENST00000552973 SPSB3Q6PJ21 355 aa8.49□□□□□ -1.05
NEK3-204ENST00000552973 CEMP1Q6PRD7 247 aaPredicted RBP8.49□□□□□ -1.05
NEK3-204ENST00000552973 WFDC3Q8IUB2 231 aa8.49□□□□□ -1.05
NEK3-204ENST00000552973 CMTM1Q8IZ96 169 aa8.49□□□□□ -1.05
NEK3-204ENST00000552973 STPG3Q8N7X2 389 aa8.49□□□□□ -1.05
NEK3-204ENST00000552973 SAMD12Q8N8I0 201 aa8.49□□□□□ -1.05
NEK3-204ENST00000552973 OR6F1Q8NGZ6 308 aa8.49□□□□□ -1.05
NEK3-204ENST00000552973 BORCS5Q969J3 196 aa8.49□□□□□ -1.05
NEK3-204ENST00000552973 SLC25A46Q96AG3 418 aa8.49□□□□□ -1.05
NEK3-204ENST00000552973 MISP3Q96FF7 219 aa8.49□□□□□ -1.05
NEK3-204ENST00000552973 RNF2Q99496 336 aa8.49□□□□□ -1.05
NEK3-204ENST00000552973 TP53TG1Q9Y2A0 90 aa8.49□□□□□ -1.05
NEK3-204ENST00000552973 NUPR2A6NF83 97 aa8.48□□□□□ -1.05
NEK3-204ENST00000552973 OR4C46A6NHA9 309 aa8.48□□□□□ -1.05
NEK3-204ENST00000552973 K7EMT4 169 aa8.48□□□□□ -1.05
NEK3-204ENST00000552973 GPR31O00270 319 aa8.48□□□□□ -1.05
NEK3-204ENST00000552973 UBE2CO00762 179 aa8.48□□□□□ -1.05
NEK3-204ENST00000552973 CTSGP08311 255 aa8.48□□□□□ -1.05
NEK3-204ENST00000552973 FGF2P09038 288 aa8.48□□□□□ -1.05
NEK3-204ENST00000552973 FCGR2BP31994 310 aaPredicted RBP8.48□□□□□ -1.05
NEK3-204ENST00000552973 PRSS3P35030 304 aa8.48□□□□□ -1.05
NEK3-204ENST00000552973 TNFRSF9Q07011 255 aa8.48□□□□□ -1.05
NEK3-204ENST00000552973 UBE2NLQ5JXB2 153 aa8.48□□□□□ -1.05
NEK3-204ENST00000552973 LYSMD2Q8IV50 215 aa8.48□□□□□ -1.05
NEK3-204ENST00000552973 RNF183Q96D59 192 aa8.48□□□□□ -1.05
NEK3-204ENST00000552973 ZNF414Q96IQ9 312 aa8.48□□□□□ -1.05
NEK3-204ENST00000552973 TMEM56Q96MV1 263 aa8.48□□□□□ -1.05
NEK3-204ENST00000552973 RHPN1-AS1Q9BWJ2 59 aa8.48□□□□□ -1.05
NEK3-204ENST00000552973 SMPXQ9UHP9 88 aa8.48□□□□□ -1.05
NEK3-204ENST00000552973 PRNDQ9UKY0 176 aa8.48□□□□□ -1.05
NEK3-204ENST00000552973 ANAPC10Q9UM13 185 aa8.48□□□□□ -1.05
NEK3-204ENST00000552973 C15orf62A8K5M9 175 aa8.47□□□□□ -1.05
NEK3-204ENST00000552973 CHEK1O14757 476 aa8.47□□□□□ -1.05
NEK3-204ENST00000552973 NUPL2O15504 423 aaKnown RBP8.47□□□□□ -1.05
NEK3-204ENST00000552973 NAT1P18440 290 aa8.47□□□□□ -1.05
NEK3-204ENST00000552973 HRH1P35367 487 aa8.47□□□□□ -1.05
NEK3-204ENST00000552973 TAS2R46P59540 309 aa8.47□□□□□ -1.05
NEK3-204ENST00000552973 TSPAN5P62079 268 aa8.47□□□□□ -1.05
NEK3-204ENST00000552973 TBC1D26Q86UD7 250 aa8.47□□□□□ -1.05
NEK3-204ENST00000552973 GBGT1Q8N5D6 347 aa8.47□□□□□ -1.05
NEK3-204ENST00000552973 TMEM116Q8NCL8 245 aa8.47□□□□□ -1.05
NEK3-204ENST00000552973 PINX1Q96BK5 328 aaKnown RBP8.47□□□□□ -1.05
NEK3-204ENST00000552973 GALNT14Q96FL9 552 aa8.47□□□□□ -1.05
NEK3-204ENST00000552973 MAP6D1Q9H9H5 199 aa8.47□□□□□ -1.05
NEK3-204ENST00000552973 KIR2DL5BA0A0G2JN68 375 aa8.46□□□□□ -1.06
NEK3-204ENST00000552973 KIR2DL5BA0A0G2JPC4 375 aa8.46□□□□□ -1.06
NEK3-204ENST00000552973 IGHV7-4-1A0A0J9YVY3 117 aa8.46□□□□□ -1.06
NEK3-204ENST00000552973 C15orf61A6NNL5 157 aa8.46□□□□□ -1.06
NEK3-204ENST00000552973 I3L2K1 104 aa8.46□□□□□ -1.06
NEK3-204ENST00000552973 TMEM127O75204 238 aa8.46□□□□□ -1.06
NEK3-204ENST00000552973 MT-CO2P00403 227 aa8.46□□□□□ -1.06
NEK3-204ENST00000552973 IGKV1-39P01597 117 aa8.46□□□□□ -1.06
NEK3-204ENST00000552973 IGKV1D-39P04432 117 aa8.46□□□□□ -1.06
NEK3-204ENST00000552973 EIF4EP06730 217 aaKnown RBP8.46□□□□□ -1.06
NEK3-204ENST00000552973 MFAP4P55083 255 aa8.46□□□□□ -1.06
NEK3-204ENST00000552973 SPINK9Q5DT21 86 aa8.46□□□□□ -1.06
NEK3-204ENST00000552973 CROCCP3Q8IVE0 287 aa8.46□□□□□ -1.06
NEK3-204ENST00000552973 KIR2DL5AQ8N109 375 aa8.46□□□□□ -1.06
NEK3-204ENST00000552973 OR1P1Q8NH06 330 aa8.46□□□□□ -1.06
NEK3-204ENST00000552973 OR4A16Q8NH70 328 aa8.46□□□□□ -1.06
NEK3-204ENST00000552973 KIR2DL5BQ8NHK3 375 aa8.46□□□□□ -1.06
NEK3-204ENST00000552973 KRTAP3-3Q9BYR6 98 aa8.46□□□□□ -1.06
NEK3-204ENST00000552973 KRTAP3-2Q9BYR7 98 aa8.46□□□□□ -1.06
NEK3-204ENST00000552973 TMEM14BQ9NUH8 114 aa8.46□□□□□ -1.06
NEK3-204ENST00000552973 FKBP11Q9NYL4 201 aa8.46□□□□□ -1.06
NEK3-204ENST00000552973 COMMD3Q9UBI1 195 aa8.46□□□□□ -1.06
NEK3-204ENST00000552973 KLK5Q9Y337 293 aaPredicted RBP8.46□□□□□ -1.06
NEK3-204ENST00000552973 ALMS1Q8TCU4 4167 aa8.45□□□□□ -1.06
NEK3-204ENST00000552973 TRAV14DV4A0A0A6YYC5 116 aa8.45□□□□□ -1.06
NEK3-204ENST00000552973 IGHV3-66A0A0C4DH42 116 aa8.45□□□□□ -1.06
NEK3-204ENST00000552973 RELQ04864 619 aaPredicted RBP8.45□□□□□ -1.06
NEK3-204ENST00000552973 IZUMO4Q1ZYL8 232 aa8.45□□□□□ -1.06
NEK3-204ENST00000552973 KCTD21Q4G0X4 260 aa8.45□□□□□ -1.06
NEK3-204ENST00000552973 H2BFWTQ7Z2G1 175 aa8.45□□□□□ -1.06
NEK3-204ENST00000552973 SNX29P2Q8IUI4 249 aa8.45□□□□□ -1.06
NEK3-204ENST00000552973 RPP25LQ8N5L8 163 aaKnown RBP8.45□□□□□ -1.06
NEK3-204ENST00000552973 GPX8Q8TED1 209 aa8.45□□□□□ -1.06
NEK3-204ENST00000552973 MRGPRFQ96AM1 343 aa8.45□□□□□ -1.06
NEK3-204ENST00000552973 YIPF6Q96EC8 236 aa8.45□□□□□ -1.06
NEK3-204ENST00000552973 SEC22AQ96IW7 307 aa8.45□□□□□ -1.06
NEK3-204ENST00000552973 ATP6V0BQ99437 205 aa8.45□□□□□ -1.06
NEK3-204ENST00000552973 TSC22D3Q99576 134 aa8.45□□□□□ -1.06
NEK3-204ENST00000552973 CSTL1Q9H114 145 aa8.45□□□□□ -1.06
NEK3-204ENST00000552973 MPTX1A8MV57 137 aa8.44□□□□□ -1.06
NEK3-204ENST00000552973 GNG7O60262 68 aa8.44□□□□□ -1.06
NEK3-204ENST00000552973 DEDDO75618 318 aa8.44□□□□□ -1.06
NEK3-204ENST00000552973 APOHP02749 345 aaPredicted RBP8.44□□□□□ -1.06
NEK3-204ENST00000552973 S100GP29377 79 aa8.44□□□□□ -1.06
NEK3-204ENST00000552973 RNASE12Q5GAN4 147 aaKnown RBP8.44□□□□□ -1.06
NEK3-204ENST00000552973 TCF24Q7RTU0 167 aa8.44□□□□□ -1.06
NEK3-204ENST00000552973 CADM3Q8N126 398 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms