RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 PKDREJQ9NTG1 2253 aa9.59□□□□□ -0.88
PPFIA2-227ENST00000552948 IGLC2P0DOY2 106 aa9.58□□□□□ -0.88
PPFIA2-227ENST00000552948 IGLC3P0DOY3 106 aa9.58□□□□□ -0.88
PPFIA2-227ENST00000552948 SELENOTP62341 195 aa9.58□□□□□ -0.88
PPFIA2-227ENST00000552948 GAGE1Q13065 139 aa9.58□□□□□ -0.88
PPFIA2-227ENST00000552948 CLEC7AQ9BXN2 247 aa9.58□□□□□ -0.88
PPFIA2-227ENST00000552948 TRBV9A0A0B4J1U6 114 aa9.58□□□□□ -0.88
PPFIA2-227ENST00000552948 H3BTX0 84 aa9.58□□□□□ -0.88
PPFIA2-227ENST00000552948 K7ESF4 209 aa9.58□□□□□ -0.88
PPFIA2-227ENST00000552948 Q6ZR03 302 aa9.58□□□□□ -0.88
PPFIA2-227ENST00000552948 MRPS18CQ9Y3D5 142 aaKnown RBP9.58□□□□□ -0.88
PPFIA2-227ENST00000552948 TRAV5A0A0B4J249 113 aa9.58□□□□□ -0.88
PPFIA2-227ENST00000552948 PRRX1P54821 245 aa9.58□□□□□ -0.88
PPFIA2-227ENST00000552948 ERVK11-1P61568 191 aa9.58□□□□□ -0.88
PPFIA2-227ENST00000552948 GABRA6Q16445 453 aa9.58□□□□□ -0.88
PPFIA2-227ENST00000552948 TNXAQ16473 311 aa9.58□□□□□ -0.88
PPFIA2-227ENST00000552948 MOGAT3Q86VF5 341 aa9.58□□□□□ -0.88
PPFIA2-227ENST00000552948 ALKBH7Q9BT30 221 aaPredicted RBP9.58□□□□□ -0.88
PPFIA2-227ENST00000552948 PILRBQ9UKJ0 227 aa9.58□□□□□ -0.88
PPFIA2-227ENST00000552948 V9GYV3 84 aa9.58□□□□□ -0.88
PPFIA2-227ENST00000552948 TRGV10A0A0A0MS01 117 aa9.57□□□□□ -0.88
PPFIA2-227ENST00000552948 ORM2P19652 201 aa9.57□□□□□ -0.88
PPFIA2-227ENST00000552948 CX3CL1P78423 397 aa9.57□□□□□ -0.88
PPFIA2-227ENST00000552948 Q0VG73 95 aa9.57□□□□□ -0.88
PPFIA2-227ENST00000552948 OR4A47Q6IF82 309 aa9.57□□□□□ -0.88
PPFIA2-227ENST00000552948 WDR82Q6UXN9 313 aa9.57□□□□□ -0.88
PPFIA2-227ENST00000552948 LHFPL4Q7Z7J7 247 aa9.57□□□□□ -0.88
PPFIA2-227ENST00000552948 TMEM105Q8N8V8 129 aa9.57□□□□□ -0.88
PPFIA2-227ENST00000552948 OR9G1Q8NH87 305 aa9.57□□□□□ -0.88
PPFIA2-227ENST00000552948 MED13Q9UHV7 2174 aa9.57□□□□□ -0.88
PPFIA2-227ENST00000552948 BMPR1BO00238 502 aa9.57□□□□□ -0.88
PPFIA2-227ENST00000552948 SLC25A5P05141 298 aaKnown RBP9.57□□□□□ -0.88
PPFIA2-227ENST00000552948 SP1P08047 785 aa9.57□□□□□ -0.88
PPFIA2-227ENST00000552948 APELAP0DMC3 54 aa9.57□□□□□ -0.88
PPFIA2-227ENST00000552948 PMS2CLQ68D20 193 aa9.57□□□□□ -0.88
PPFIA2-227ENST00000552948 TSKUQ8WUA8 353 aa9.57□□□□□ -0.88
PPFIA2-227ENST00000552948 EP300Q09472 2414 aaPredicted RBP9.57□□□□□ -0.88
PPFIA2-227ENST00000552948 M0QZ24 198 aa9.57□□□□□ -0.88
PPFIA2-227ENST00000552948 PRB4P10163 310 aaPredicted RBP9.57□□□□□ -0.88
PPFIA2-227ENST00000552948 COX19Q49B96 90 aa9.57□□□□□ -0.88
PPFIA2-227ENST00000552948 MORN2Q502X0 79 aa9.57□□□□□ -0.88
PPFIA2-227ENST00000552948 ATP1A1-AS1Q5TC04 95 aa9.57□□□□□ -0.88
PPFIA2-227ENST00000552948 RNASE8Q8TDE3 154 aaKnown RBP9.57□□□□□ -0.88
PPFIA2-227ENST00000552948 MCRIP2Q9BUT9 160 aaKnown RBP9.57□□□□□ -0.88
PPFIA2-227ENST00000552948 ZNF835Q9Y2P0 537 aa9.57□□□□□ -0.88
PPFIA2-227ENST00000552948 AMMECR1Q9Y4X0 333 aaPredicted RBP9.57□□□□□ -0.88
PPFIA2-227ENST00000552948 EXPH5Q8NEV8 1989 aa9.57□□□□□ -0.88
PPFIA2-227ENST00000552948 TRAV9-1A0A075B6T8 112 aa9.56□□□□□ -0.88
PPFIA2-227ENST00000552948 CHEK1O14757 476 aa9.56□□□□□ -0.88
PPFIA2-227ENST00000552948 TSPOP30536 169 aa9.56□□□□□ -0.88
PPFIA2-227ENST00000552948 REG1BP48304 166 aa9.56□□□□□ -0.88
PPFIA2-227ENST00000552948 LINC00310P59036 64 aa9.56□□□□□ -0.88
PPFIA2-227ENST00000552948 C19orf35Q6ZS72 473 aa9.56□□□□□ -0.88
PPFIA2-227ENST00000552948 PMCHL2Q9BQD1 86 aa9.56□□□□□ -0.88
PPFIA2-227ENST00000552948 FRYQ5TBA9 3013 aa9.56□□□□□ -0.88
PPFIA2-227ENST00000552948 SNAI2O43623 268 aa9.56□□□□□ -0.88
PPFIA2-227ENST00000552948 TMEM136Q6ZRR5 245 aa9.56□□□□□ -0.88
PPFIA2-227ENST00000552948 CCL25O15444 150 aa9.56□□□□□ -0.88
PPFIA2-227ENST00000552948 NUDT3O95989 172 aa9.56□□□□□ -0.88
PPFIA2-227ENST00000552948 LINC00869P0C866 280 aa9.56□□□□□ -0.88
PPFIA2-227ENST00000552948 PYYP10082 97 aa9.56□□□□□ -0.88
PPFIA2-227ENST00000552948 IGHV1-2P23083 117 aa9.56□□□□□ -0.88
PPFIA2-227ENST00000552948 SSX8Q7RTT4 187 aa9.56□□□□□ -0.88
PPFIA2-227ENST00000552948 TDHQ8IZJ6 230 aa9.56□□□□□ -0.88
PPFIA2-227ENST00000552948 IGHV3-21A0A0B4J1V1 117 aa9.56□□□□□ -0.88
PPFIA2-227ENST00000552948 SH2D7A6NKC9 451 aaPredicted RBP9.56□□□□□ -0.88
PPFIA2-227ENST00000552948 C8orf88P0DMB2 117 aa9.56□□□□□ -0.88
PPFIA2-227ENST00000552948 TDGF1P13385 188 aa9.56□□□□□ -0.88
PPFIA2-227ENST00000552948 VWC2Q2TAL6 325 aa9.56□□□□□ -0.88
PPFIA2-227ENST00000552948 SAP30LQ9HAJ7 183 aa9.56□□□□□ -0.88
PPFIA2-227ENST00000552948 CALYQ9NYX4 217 aa9.56□□□□□ -0.88
PPFIA2-227ENST00000552948 INTS1Q8N201 2190 aaKnown RBP9.55□□□□□ -0.88
PPFIA2-227ENST00000552948 C9JCJ5 164 aa9.55□□□□□ -0.88
PPFIA2-227ENST00000552948 CD24P25063 80 aa9.55□□□□□ -0.88
PPFIA2-227ENST00000552948 ERHP84090 104 aaKnown RBP9.55□□□□□ -0.88
PPFIA2-227ENST00000552948 SLAQ13239 276 aa9.55□□□□□ -0.88
PPFIA2-227ENST00000552948 RTL8BQ17RB0 113 aa9.55□□□□□ -0.88
PPFIA2-227ENST00000552948 CD177Q8N6Q3 437 aa9.55□□□□□ -0.88
PPFIA2-227ENST00000552948 OR2V2Q96R30 315 aa9.55□□□□□ -0.88
PPFIA2-227ENST00000552948 OSTCQ9NRP0 149 aa9.55□□□□□ -0.88
PPFIA2-227ENST00000552948 IQCF6A8MYZ5 107 aa9.55□□□□□ -0.88
PPFIA2-227ENST00000552948 ENSAO43768 121 aaKnown RBP9.55□□□□□ -0.88
PPFIA2-227ENST00000552948 TNFSF4P23510 183 aa9.55□□□□□ -0.88
PPFIA2-227ENST00000552948 CCL11P51671 97 aa9.55□□□□□ -0.88
PPFIA2-227ENST00000552948 KLF3P57682 345 aaPredicted RBP9.55□□□□□ -0.88
PPFIA2-227ENST00000552948 OR10J3Q5JRS4 329 aa9.55□□□□□ -0.88
PPFIA2-227ENST00000552948 FAM168AQ92567 244 aa9.55□□□□□ -0.88
PPFIA2-227ENST00000552948 AHRRA9YTQ3 701 aa9.55□□□□□ -0.88
PPFIA2-227ENST00000552948 MGST3O14880 152 aa9.55□□□□□ -0.88
PPFIA2-227ENST00000552948 CRYABP02511 175 aaKnown RBP9.55□□□□□ -0.88
PPFIA2-227ENST00000552948 FBLN7Q53RD9 439 aa9.55□□□□□ -0.88
PPFIA2-227ENST00000552948 ZNF766Q5HY98 468 aa9.55□□□□□ -0.88
PPFIA2-227ENST00000552948 SSUH2Q9Y2M2 353 aa9.55□□□□□ -0.88
PPFIA2-227ENST00000552948 OR4C46A6NHA9 309 aa9.54□□□□□ -0.88
PPFIA2-227ENST00000552948 M0R1B8 84 aa9.54□□□□□ -0.88
PPFIA2-227ENST00000552948 VDAC2P45880 294 aaPredicted RBP9.54□□□□□ -0.88
PPFIA2-227ENST00000552948 GNG5P63218 68 aa9.54□□□□□ -0.88
PPFIA2-227ENST00000552948 TCF24Q7RTU0 167 aa9.54□□□□□ -0.88
PPFIA2-227ENST00000552948 CDX2Q99626 313 aaPredicted RBP9.54□□□□□ -0.88
PPFIA2-227ENST00000552948 PAXXQ9BUH6 204 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms