RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 C3orf85A0A1B0GTC6 90 aa8.98□□□□□ -0.97
CKAP4-202ENST00000552828 B3GALNT1O75752 331 aa8.98□□□□□ -0.97
CKAP4-202ENST00000552828 IL6RP08887 468 aaPredicted RBP8.98□□□□□ -0.97
CKAP4-202ENST00000552828 RPA2P15927 270 aa8.98□□□□□ -0.97
CKAP4-202ENST00000552828 HLA-GP17693 338 aa8.98□□□□□ -0.97
CKAP4-202ENST00000552828 RPL27AP46776 148 aaKnown RBP8.98□□□□□ -0.97
CKAP4-202ENST00000552828 TATDN3Q17R31 274 aa8.98□□□□□ -0.97
CKAP4-202ENST00000552828 LCN12Q6JVE5 192 aa8.98□□□□□ -0.97
CKAP4-202ENST00000552828 OR2K2Q8NGT1 345 aa8.98□□□□□ -0.97
CKAP4-202ENST00000552828 IL17DQ8TAD2 202 aa8.98□□□□□ -0.97
CKAP4-202ENST00000552828 ENKURQ8TC29 256 aa8.98□□□□□ -0.97
CKAP4-202ENST00000552828 RTBDNQ9BSG5 229 aaPredicted RBP8.98□□□□□ -0.97
CKAP4-202ENST00000552828 C5orf66Q9H5L9 145 aa8.98□□□□□ -0.97
CKAP4-202ENST00000552828 TUBA4BQ9H853 241 aa8.98□□□□□ -0.97
CKAP4-202ENST00000552828 TRAV3A0A0B4J244 114 aa8.97□□□□□ -0.97
CKAP4-202ENST00000552828 TEX13DA0A0J9YY54 714 aaPredicted RBP8.97□□□□□ -0.97
CKAP4-202ENST00000552828 IZUMO1RA6ND01 250 aa8.97□□□□□ -0.97
CKAP4-202ENST00000552828 RBMXL2O75526 392 aaKnown RBP8.97□□□□□ -0.97
CKAP4-202ENST00000552828 SNAPC5O75971 98 aa8.97□□□□□ -0.97
CKAP4-202ENST00000552828 ATG12O94817 140 aa8.97□□□□□ -0.97
CKAP4-202ENST00000552828 TRBV12-3P01733 135 aa8.97□□□□□ -0.97
CKAP4-202ENST00000552828 FGF2P09038 288 aa8.97□□□□□ -0.97
CKAP4-202ENST00000552828 APELAP0DMC3 54 aa8.97□□□□□ -0.97
CKAP4-202ENST00000552828 S100A1P23297 94 aa8.97□□□□□ -0.97
CKAP4-202ENST00000552828 G6PCP35575 357 aa8.97□□□□□ -0.97
CKAP4-202ENST00000552828 ZFP69Q49AA0 526 aa8.97□□□□□ -0.97
CKAP4-202ENST00000552828 C10orf55Q5SWW7 151 aa8.97□□□□□ -0.97
CKAP4-202ENST00000552828 PLET1Q6UQ28 207 aa8.97□□□□□ -0.97
CKAP4-202ENST00000552828 FYTTD1Q96QD9 318 aaKnown RBP8.97□□□□□ -0.97
CKAP4-202ENST00000552828 TP53RKQ96S44 253 aa8.97□□□□□ -0.97
CKAP4-202ENST00000552828 COMMD5Q9GZQ3 224 aa8.97□□□□□ -0.97
CKAP4-202ENST00000552828 HIPK2Q9H2X6 1198 aa8.97□□□□□ -0.97
CKAP4-202ENST00000552828 NAP1L6A6NFF2 107 aa8.96□□□□□ -0.98
CKAP4-202ENST00000552828 CENPXA8MT69 81 aa8.96□□□□□ -0.98
CKAP4-202ENST00000552828 LYRM1O43325 122 aa8.96□□□□□ -0.98
CKAP4-202ENST00000552828 JTBO76095 146 aa8.96□□□□□ -0.98
CKAP4-202ENST00000552828 OR9G9P0C7N8 305 aa8.96□□□□□ -0.98
CKAP4-202ENST00000552828 IFITM2Q01629 132 aa8.96□□□□□ -0.98
CKAP4-202ENST00000552828 RPEL1Q2QD12 228 aa8.96□□□□□ -0.98
CKAP4-202ENST00000552828 SP6Q3SY56 376 aa8.96□□□□□ -0.98
CKAP4-202ENST00000552828 H2BFWTQ7Z2G1 175 aa8.96□□□□□ -0.98
CKAP4-202ENST00000552828 SLC25A42Q86VD7 318 aa8.96□□□□□ -0.98
CKAP4-202ENST00000552828 TCTE3Q8IZS6 198 aa8.96□□□□□ -0.98
CKAP4-202ENST00000552828 TTC9CQ8N5M4 171 aa8.96□□□□□ -0.98
CKAP4-202ENST00000552828 ADAD2Q8NCV1 583 aaKnown RBP8.96□□□□□ -0.98
CKAP4-202ENST00000552828 SEC22AQ96IW7 307 aa8.96□□□□□ -0.98
CKAP4-202ENST00000552828 SLC25A21Q9BQT8 299 aaPredicted RBP8.96□□□□□ -0.98
CKAP4-202ENST00000552828 MARVELD1Q9BSK0 173 aa8.96□□□□□ -0.98
CKAP4-202ENST00000552828 NAA60Q9H7X0 242 aa8.96□□□□□ -0.98
CKAP4-202ENST00000552828 COA4Q9NYJ1 87 aa8.96□□□□□ -0.98
CKAP4-202ENST00000552828 FKBP11Q9NYL4 201 aa8.96□□□□□ -0.98
CKAP4-202ENST00000552828 KCNIP3Q9Y2W7 256 aa8.96□□□□□ -0.98
CKAP4-202ENST00000552828 CRYM-AS1A6NIL9 109 aa8.95□□□□□ -0.98
CKAP4-202ENST00000552828 TEX22C9J3V5 150 aa8.95□□□□□ -0.98
CKAP4-202ENST00000552828 E7EUB6 86 aa8.95□□□□□ -0.98
CKAP4-202ENST00000552828 IGKV1-39P01597 117 aa8.95□□□□□ -0.98
CKAP4-202ENST00000552828 IGKV1D-39P04432 117 aa8.95□□□□□ -0.98
CKAP4-202ENST00000552828 OR5AC1P0C628 307 aa8.95□□□□□ -0.98
CKAP4-202ENST00000552828 UCP1P25874 307 aa8.95□□□□□ -0.98
CKAP4-202ENST00000552828 OR2B8PP59922 312 aa8.95□□□□□ -0.98
CKAP4-202ENST00000552828 DHODHQ02127 395 aa8.95□□□□□ -0.98
CKAP4-202ENST00000552828 OR4A16Q8NH70 328 aa8.95□□□□□ -0.98
CKAP4-202ENST00000552828 TMEM222Q9H0R3 208 aa8.95□□□□□ -0.98
CKAP4-202ENST00000552828 PEMTQ9UBM1 199 aa8.95□□□□□ -0.98
CKAP4-202ENST00000552828 PRNDQ9UKY0 176 aa8.95□□□□□ -0.98
CKAP4-202ENST00000552828 TRBV9A0A0B4J1U6 114 aa8.94□□□□□ -0.98
CKAP4-202ENST00000552828 TEX50A0A1B0GTY4 177 aa8.94□□□□□ -0.98
CKAP4-202ENST00000552828 LINC00854A0A1B0GVQ3 168 aa8.94□□□□□ -0.98
CKAP4-202ENST00000552828 FAM240BA0A1B0GVZ2 78 aa8.94□□□□□ -0.98
CKAP4-202ENST00000552828 FAM223BA6NKX1 122 aa8.94□□□□□ -0.98
CKAP4-202ENST00000552828 ZNF785A8K8V0 405 aa8.94□□□□□ -0.98
CKAP4-202ENST00000552828 NPIPB5A8MRT5 1133 aa8.94□□□□□ -0.98
CKAP4-202ENST00000552828 BMPR1BO00238 502 aa8.94□□□□□ -0.98
CKAP4-202ENST00000552828 CDS2O95674 445 aa8.94□□□□□ -0.98
CKAP4-202ENST00000552828 DHFRP00374 187 aa8.94□□□□□ -0.98
CKAP4-202ENST00000552828 MYOD1P15172 320 aa8.94□□□□□ -0.98
CKAP4-202ENST00000552828 AKR1C4P17516 323 aa8.94□□□□□ -0.98
CKAP4-202ENST00000552828 AKR1C2P52895 323 aa8.94□□□□□ -0.98
CKAP4-202ENST00000552828 DEFA5Q01523 94 aa8.94□□□□□ -0.98
CKAP4-202ENST00000552828 THOC7Q6I9Y2 204 aaKnown RBP8.94□□□□□ -0.98
CKAP4-202ENST00000552828 FAM223AQ8IWN6 122 aa8.94□□□□□ -0.98
CKAP4-202ENST00000552828 OR1L8Q8NGR8 309 aa8.94□□□□□ -0.98
CKAP4-202ENST00000552828 GLYATL2Q8WU03 294 aa8.94□□□□□ -0.98
CKAP4-202ENST00000552828 RRNAD1Q96FB5 475 aaKnown RBP8.94□□□□□ -0.98
CKAP4-202ENST00000552828 C7orf50Q9BRJ6 194 aaKnown RBP8.94□□□□□ -0.98
CKAP4-202ENST00000552828 SRSF8Q9BRL6 282 aaKnown RBP8.94□□□□□ -0.98
CKAP4-202ENST00000552828 QTRT1Q9BXR0 403 aaKnown RBP8.94□□□□□ -0.98
CKAP4-202ENST00000552828 RETNQ9HD89 108 aa8.94□□□□□ -0.98
CKAP4-202ENST00000552828 ZNF257Q9Y2Q1 563 aa8.94□□□□□ -0.98
CKAP4-202ENST00000552828 NSG2Q9Y328 171 aa8.94□□□□□ -0.98
CKAP4-202ENST00000552828 OR51B2Q9Y5P1 312 aa8.94□□□□□ -0.98
CKAP4-202ENST00000552828 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.93□□□□□ -0.98
CKAP4-202ENST00000552828 A0A0B4J293 547 aa8.93□□□□□ -0.98
CKAP4-202ENST00000552828 A0A1B0GW64 132 aa8.93□□□□□ -0.98
CKAP4-202ENST00000552828 RBMY1BA6NDE4 496 aaKnown RBP8.93□□□□□ -0.98
CKAP4-202ENST00000552828 RBMY1EA6NEQ0 496 aaKnown RBP8.93□□□□□ -0.98
CKAP4-202ENST00000552828 C15orf61A6NNL5 157 aa8.93□□□□□ -0.98
CKAP4-202ENST00000552828 CRYGCP07315 174 aa8.93□□□□□ -0.98
CKAP4-202ENST00000552828 RBMY1DP0C7P1 496 aaKnown RBP8.93□□□□□ -0.98
CKAP4-202ENST00000552828 ANXA3P12429 323 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms