RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 TRAV9-1A0A075B6T8 112 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 TRAV7A0A075B6U4 112 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 A0A0D9SEW6 157 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 TRAPPC13A5PLN9 417 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 MEIS3P1A6NDR6 274 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 H3BT86 120 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 CXCR6O00574 342 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 PIRO00625 290 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 PLA2G10O15496 165 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 NDUFS6O75380 124 aaKnown RBP0.67□□□□□ -2.3
USP44-207ENST00000552237 IFNA5P01569 189 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 PPBPP02775 128 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 IFNA16P05015 189 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 LGALS1P09382 135 aaKnown RBP0.67□□□□□ -2.3
USP44-207ENST00000552237 RBP1P09455 135 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 UBBP0CG47 229 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 FGF6P10767 208 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 HIST1H2BOP23527 126 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 RPS12P25398 132 aaKnown RBP0.67□□□□□ -2.3
USP44-207ENST00000552237 HIST1H2BBP33778 126 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 RPL28P46779 137 aaKnown RBP0.67□□□□□ -2.3
USP44-207ENST00000552237 CLDN12P56749 244 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 HIST1H2BDP58876 126 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 AP3S2P59780 193 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 RAB14P61106 215 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 YPEL3P61236 119 aaPredicted RBP0.67□□□□□ -2.3
USP44-207ENST00000552237 NAA20P61599 178 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 HIST1H2BCP62807 126 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 KCNJ8Q15842 424 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 HIST2H2BEQ16778 126 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 ARHGAP11BQ3KRB8 267 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 KHDC3LQ587J8 217 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.67□□□□□ -2.3
USP44-207ENST00000552237 IBA57Q5T440 356 aaKnown RBP0.67□□□□□ -2.3
USP44-207ENST00000552237 FAM173BQ6P4H8 233 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 SSX8Q7RTT4 187 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 PHF13Q86YI8 300 aaPredicted RBP0.67□□□□□ -2.3
USP44-207ENST00000552237 OR6V1Q8N148 313 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 ANKRD29Q8N6D5 301 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 C12orf29Q8N999 325 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 OR4E2Q8NGC2 313 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 OR4D11Q8NGI4 311 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 HIST1H2BHQ93079 126 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 HIST1H2BNQ99877 126 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 HIST1H2BMQ99879 126 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 CHST6Q9GZX3 395 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 NMNAT1Q9HAN9 279 aaPredicted RBP0.67□□□□□ -2.3
USP44-207ENST00000552237 IMP3Q9NV31 184 aaKnown RBP0.67□□□□□ -2.3
USP44-207ENST00000552237 VPS29Q9UBQ0 182 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 ANAPC10Q9UM13 185 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 SLC35A3Q9Y2D2 325 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 ARL2BPQ9Y2Y0 163 aa0.67□□□□□ -2.3
USP44-207ENST00000552237 ZFHX2Q9C0A1 2572 aaPredicted RBP0.67□□□□□ -2.3
USP44-207ENST00000552237 CHD3Q12873 2000 aaKnown RBP0.67□□□□□ -2.3
USP44-207ENST00000552237 EML6Q6ZMW3 1958 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 DCCP43146 1447 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 TMED7-TICAM2A0A0A6YYA0 188 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 TRBV10-2A0A0K0K1G8 114 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 LEPROTO15243 131 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 TGOLN2O43493 480 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 SULT1B1O43704 296 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 NIPSNAP2O75323 286 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 E2F6O75461 281 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 SNRNP200O75643 2136 aaKnown RBP0.66□□□□□ -2.3
USP44-207ENST00000552237 OR2B3O76000 313 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 IGHV3-7P01780 117 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 PMP2P02689 132 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 SHBGP04278 402 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 PRM2P04554 102 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 OR5G3P0C626 314 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 PRB4P10163 310 aaPredicted RBP0.66□□□□□ -2.3
USP44-207ENST00000552237 RPS4Y1P22090 263 aaKnown RBP0.66□□□□□ -2.3
USP44-207ENST00000552237 CASP1P29466 404 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 NKX2-5P52952 324 aaPredicted RBP0.66□□□□□ -2.3
USP44-207ENST00000552237 RAB5BP61020 215 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 UBE2IP63279 158 aaKnown RBP0.66□□□□□ -2.3
USP44-207ENST00000552237 HBA1P69905 142 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 MYL5Q02045 173 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 RPL18Q07020 188 aaKnown RBP0.66□□□□□ -2.3
USP44-207ENST00000552237 ITGB3BPQ13352 177 aaPredicted RBP0.66□□□□□ -2.3
USP44-207ENST00000552237 EDDM3AQ14507 147 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 Q1T7F1 81 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 RGS21Q2M5E4 152 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 SAPCD1Q5SSQ6 148 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 C8orf74Q6P047 294 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 Q6ZS49 121 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 DEFB128Q7Z7B8 93 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 OOSP2Q86WS3 158 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 DYNAPQ8N1N2 210 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 RIBC1Q8N443 379 aaPredicted RBP0.66□□□□□ -2.3
USP44-207ENST00000552237 OR51D1Q8NGF3 324 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 OR8B3Q8NGG8 313 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 TEX47Q8TBZ9 253 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 MRPL30Q8TCC3 161 aaKnown RBP0.66□□□□□ -2.3
USP44-207ENST00000552237 ZNF431Q8TF32 576 aaPredicted RBP0.66□□□□□ -2.3
USP44-207ENST00000552237 FAM172AQ8WUF8 416 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 PTH2Q96A98 100 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 ODF3Q96PU9 254 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 PHB2Q99623 299 aa0.66□□□□□ -2.3
USP44-207ENST00000552237 LLPHQ9BRT6 129 aaKnown RBP0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms