RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 ARFRP1Q13795 201 aa3.83□□□□□ -1.8
HOXB3-213ENST00000552000 DNAL1Q4LDG9 190 aa3.83□□□□□ -1.8
HOXB3-213ENST00000552000 ZNF367Q7RTV3 350 aa3.83□□□□□ -1.8
HOXB3-213ENST00000552000 STHQ8IWL8 128 aa3.83□□□□□ -1.8
HOXB3-213ENST00000552000 SPARTQ8N0X7 666 aa3.83□□□□□ -1.8
HOXB3-213ENST00000552000 PUSL1Q8N0Z8 303 aaKnown RBP3.83□□□□□ -1.8
HOXB3-213ENST00000552000 OR4A4PQ8NGN8 299 aa3.83□□□□□ -1.8
HOXB3-213ENST00000552000 OR10J5Q8NHC4 309 aa3.83□□□□□ -1.8
HOXB3-213ENST00000552000 RHOXF1Q8NHV9 184 aa3.83□□□□□ -1.8
HOXB3-213ENST00000552000 TMEM167AQ8TBQ9 72 aa3.83□□□□□ -1.8
HOXB3-213ENST00000552000 GIMAP1Q8WWP7 306 aa3.83□□□□□ -1.8
HOXB3-213ENST00000552000 CENPNQ96H22 339 aaPredicted RBP3.83□□□□□ -1.8
HOXB3-213ENST00000552000 ARHGAP5-AS1Q96IT6 56 aa3.83□□□□□ -1.8
HOXB3-213ENST00000552000 Q96MT0 163 aa3.83□□□□□ -1.8
HOXB3-213ENST00000552000 OR2A7Q96R45 310 aa3.83□□□□□ -1.8
HOXB3-213ENST00000552000 GINS4Q9BRT9 223 aa3.83□□□□□ -1.8
HOXB3-213ENST00000552000 CABLES2Q9BTV7 478 aa3.83□□□□□ -1.8
HOXB3-213ENST00000552000 LPAR5Q9H1C0 372 aa3.83□□□□□ -1.8
HOXB3-213ENST00000552000 FGF20Q9NP95 211 aaPredicted RBP3.83□□□□□ -1.8
HOXB3-213ENST00000552000 MED4Q9NPJ6 270 aa3.83□□□□□ -1.8
HOXB3-213ENST00000552000 CLEC5AQ9NY25 188 aa3.83□□□□□ -1.8
HOXB3-213ENST00000552000 CLEC2DQ9UHP7 191 aa3.83□□□□□ -1.8
HOXB3-213ENST00000552000 TBC1D24Q9ULP9 559 aa3.83□□□□□ -1.8
HOXB3-213ENST00000552000 TRBV6-7A0A0A0MS04 114 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 IGHV7-4-1A0A0J9YVY3 117 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 IGLC7A0M8Q6 106 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 CGB1A6NKQ9 187 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 C15orf62A8K5M9 175 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 TMEM14DPA8MWL7 114 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 DNASE2O00115 360 aaPredicted RBP3.82□□□□□ -1.8
HOXB3-213ENST00000552000 GYG2O15488 501 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 PAGE4O60829 102 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 YIF1AO95070 293 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 HLA-GP17693 338 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 CELP19835 753 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 DCKP27707 260 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 PCP4P48539 62 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 TMEM50BP56557 158 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 RPL8P62917 257 aaKnown RBP3.82□□□□□ -1.8
HOXB3-213ENST00000552000 QRFPP83859 136 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 INSL4Q14641 139 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 P2RY14Q15391 338 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 RNF212Q495C1 297 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 C1orf100Q5SVJ3 147 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 LIPKQ5VXJ0 399 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 CST9LP1Q5W188 147 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 SPSB3Q6PJ21 355 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 KCTD9Q7L273 389 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 TCF24Q7RTU0 167 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 C6orf223Q8N319 242 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 FAM24BQ8N5W8 94 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 UBAC2Q8NBM4 344 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 VSTM2AQ8TAG5 236 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 VN1R17PQ8TDU5 208 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 APH1BQ8WW43 257 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 MAFIPQ8WZ33 124 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 BSCL2Q96G97 398 aaPredicted RBP3.82□□□□□ -1.8
HOXB3-213ENST00000552000 C18orf15Q96N68 181 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 URM1Q9BTM9 101 aaKnown RBP3.82□□□□□ -1.8
HOXB3-213ENST00000552000 PECRQ9BY49 303 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 CTDSP1Q9GZU7 261 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 MRPS7Q9Y2R9 242 aaKnown RBP3.82□□□□□ -1.8
HOXB3-213ENST00000552000 PRELID3BQ9Y3B1 194 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 DNAH8Q96JB1 4490 aa3.82□□□□□ -1.8
HOXB3-213ENST00000552000 LRP1Q07954 4544 aaKnown RBP3.81□□□□□ -1.8
HOXB3-213ENST00000552000 NBDYA0A0U1RRE5 68 aa3.81□□□□□ -1.8
HOXB3-213ENST00000552000 KNCNA6PVL3 124 aa3.81□□□□□ -1.8
HOXB3-213ENST00000552000 FOXI3A8MTJ6 420 aaPredicted RBP3.81□□□□□ -1.8
HOXB3-213ENST00000552000 NUPL2O15504 423 aaKnown RBP3.81□□□□□ -1.8
HOXB3-213ENST00000552000 DFFBO76075 338 aa3.81□□□□□ -1.8
HOXB3-213ENST00000552000 FCGR3AP08637 254 aa3.81□□□□□ -1.8
HOXB3-213ENST00000552000 HTN3P15516 51 aa3.81□□□□□ -1.8
HOXB3-213ENST00000552000 MYL12AP19105 171 aa3.81□□□□□ -1.8
HOXB3-213ENST00000552000 EMP1P54849 157 aa3.81□□□□□ -1.8
HOXB3-213ENST00000552000 MFAP4P55083 255 aa3.81□□□□□ -1.8
HOXB3-213ENST00000552000 OR2B8PP59922 312 aa3.81□□□□□ -1.8
HOXB3-213ENST00000552000 RAP2BP61225 183 aa3.81□□□□□ -1.8
HOXB3-213ENST00000552000 PAFAH1B2P68402 229 aa3.81□□□□□ -1.8
HOXB3-213ENST00000552000 MRPS15P82914 257 aaKnown RBP3.81□□□□□ -1.8
HOXB3-213ENST00000552000 Q56UQ5 140 aa3.81□□□□□ -1.8
HOXB3-213ENST00000552000 TMEM41BQ5BJD5 291 aa3.81□□□□□ -1.8
HOXB3-213ENST00000552000 PLAC9Q5JTB6 97 aa3.81□□□□□ -1.8
HOXB3-213ENST00000552000 RBM48Q5RL73 367 aaKnown RBP3.81□□□□□ -1.8
HOXB3-213ENST00000552000 TTC23Q5W5X9 447 aa3.81□□□□□ -1.8
HOXB3-213ENST00000552000 FAM90A2PQ658T7 463 aa3.81□□□□□ -1.8
HOXB3-213ENST00000552000 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.81□□□□□ -1.8
HOXB3-213ENST00000552000 SLC25A24Q6NUK1 477 aa3.81□□□□□ -1.8
HOXB3-213ENST00000552000 MORN3Q6PF18 240 aaPredicted RBP3.81□□□□□ -1.8
HOXB3-213ENST00000552000 TRPT1Q86TN4 253 aaKnown RBP3.81□□□□□ -1.8
HOXB3-213ENST00000552000 LRRTM1Q86UE6 522 aa3.81□□□□□ -1.8
HOXB3-213ENST00000552000 H1FOOQ8IZA3 346 aaPredicted RBP3.81□□□□□ -1.8
HOXB3-213ENST00000552000 FAM89BQ8N5H3 189 aa3.81□□□□□ -1.8
HOXB3-213ENST00000552000 ZNF485Q8NCK3 441 aa3.81□□□□□ -1.8
HOXB3-213ENST00000552000 OR10W1Q8NGF6 305 aa3.81□□□□□ -1.8
HOXB3-213ENST00000552000 OR4S2Q8NH73 311 aa3.81□□□□□ -1.8
HOXB3-213ENST00000552000 TCTEX1D2Q8WW35 142 aa3.81□□□□□ -1.8
HOXB3-213ENST00000552000 SRSF8Q9BRL6 282 aaKnown RBP3.81□□□□□ -1.8
HOXB3-213ENST00000552000 MS4A6AQ9H2W1 248 aa3.81□□□□□ -1.8
HOXB3-213ENST00000552000 RNF167Q9H6Y7 350 aa3.81□□□□□ -1.8
HOXB3-213ENST00000552000 TMEM14BQ9NUH8 114 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms