RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 ISOC1Q96CN7 298 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 ASB9Q96DX5 294 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 PGLYRP3Q96LB9 341 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 RDH12Q96NR8 316 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 KIR2DL4Q99706 377 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 PYGO2Q9BRQ0 406 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 NIPSNAP3BQ9BS92 247 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 PAXXQ9BUH6 204 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 GABARAPL3Q9BY60 117 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 MRPL20Q9BYC9 149 aaKnown RBP1.66□□□□□ -2.14
CPSF6-207ENST00000551516 MROQ9BYG7 248 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 TTTY10Q9BZA0 68 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 GABARAPL1Q9H0R8 117 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 RPS10P5Q9NQ39 176 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 OR1A1Q9P1Q5 309 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 ZMAT5Q9UDW3 170 aaKnown RBP1.66□□□□□ -2.14
CPSF6-207ENST00000551516 WARS2Q9UGM6 360 aaKnown RBP1.66□□□□□ -2.14
CPSF6-207ENST00000551516 ZNF230Q9UIE0 474 aaPredicted RBP1.66□□□□□ -2.14
CPSF6-207ENST00000551516 APLNQ9ULZ1 77 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 SAMHD1Q9Y3Z3 626 aaKnown RBP1.66□□□□□ -2.14
CPSF6-207ENST00000551516 FAM32AQ9Y421 112 aaKnown RBP1.66□□□□□ -2.14
CPSF6-207ENST00000551516 WSB1Q9Y6I7 421 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 V9GYQ6 96 aa1.66□□□□□ -2.14
CPSF6-207ENST00000551516 FLG2Q5D862 2391 aaPredicted RBP1.66□□□□□ -2.14
CPSF6-207ENST00000551516 LRP2P98164 4655 aa1.65□□□□□ -2.14
CPSF6-207ENST00000551516 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.65□□□□□ -2.15
CPSF6-207ENST00000551516 TRAV41A0A0B4J266 112 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 LOC100131303A0A0U1RQF7 123 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 TMEM213A2RRL7 107 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 H0YJX3 145 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 LGALS9O00182 355 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 GEMIN2O14893 280 aaKnown RBP1.65□□□□□ -2.15
CPSF6-207ENST00000551516 DEGS1O15121 323 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 NBR2O15453 112 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 YPEL1O60688 119 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 CCDC22O60826 627 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 FKBP6O75344 327 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 CLIC3O95833 236 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 IFNGP01579 166 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 HBZP02008 142 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 GLAP06280 429 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 OR8U9P0C7N5 309 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 SAA2P0DJI9 122 aaPredicted RBP1.65□□□□□ -2.15
CPSF6-207ENST00000551516 ANXA8P13928 327 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 PRKACAP17612 351 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 ZP3P21754 424 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 PRKACBP22694 351 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 GABRR1P24046 479 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 FASP25445 335 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 FGF9P31371 208 aaPredicted RBP1.65□□□□□ -2.15
CPSF6-207ENST00000551516 CEACAM3P40198 252 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 MEOX2P50222 304 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 DSCR10P59022 87 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 SNRPGP62308 76 aaKnown RBP1.65□□□□□ -2.15
CPSF6-207ENST00000551516 TMED1Q13445 227 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 PSG5Q15238 335 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 LRRC36Q1X8D7 754 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 ZNF829Q3KNS6 432 aaPredicted RBP1.65□□□□□ -2.15
CPSF6-207ENST00000551516 MAJINQ3KP22 176 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 OR2B11Q5JQS5 317 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 ZNF691Q5VV52 312 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 ZNF773Q6PK81 442 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 DEFB125Q8N687 156 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 ZNF565Q8N9K5 539 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 OR4D6Q8NGJ1 314 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 OR5D18Q8NGL1 313 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 OR9G4Q8NGQ1 327 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 OR13F1Q8NGS4 319 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 OR10K1Q8NGX5 313 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 UBALD1Q8TB05 177 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 GTSF1Q8WW33 167 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 STMN2Q93045 179 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 RPEQ96AT9 228 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 CMTM5Q96DZ9 223 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 OPALINQ96PE5 141 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 YPEL2Q96QA6 119 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 OR5B12Q96R08 314 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 IL4I1Q96RQ9 567 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 CLCC1Q96S66 551 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 CNN2Q99439 309 aaKnown RBP1.65□□□□□ -2.15
CPSF6-207ENST00000551516 RNF5Q99942 180 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 PDCD1LG2Q9BQ51 273 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 SCRT1Q9BWW7 348 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 NDEL1Q9GZM8 345 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 Q9H3A6 140 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 GAL3ST2Q9H3Q3 398 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 FBXL15Q9H469 300 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 EXOSC4Q9NPD3 245 aaKnown RBP1.65□□□□□ -2.15
CPSF6-207ENST00000551516 TVP23BQ9NYZ1 205 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 TP53TG1Q9Y2A0 90 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 AK6Q9Y3D8 172 aaKnown RBP1.65□□□□□ -2.15
CPSF6-207ENST00000551516 TMEM14AQ9Y6G1 99 aa1.65□□□□□ -2.15
CPSF6-207ENST00000551516 DNAH8Q96JB1 4490 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 MEIKINA0A087WXM9 373 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 IGHV3-43A0A0B4J1X8 118 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 FAM240BA0A1B0GVZ2 78 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 A0A1B0GWB2 263 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 FAM168BA1KXE4 195 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 C2orf70A6NJV1 201 aa1.64□□□□□ -2.15
CPSF6-207ENST00000551516 TMEM14DPA8MWL7 114 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms