RNA–Protein interactions for RNA: ENST00000551293.1

RPAP3-207, Transcript of RNA polymerase II associated protein 3, humanhuman

TSL 1 (best)

Gene RPAP3, Length 621 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3-207ENST00000551293 ARPC4P59998 168 aa13.47□□□□□ -0.25
RPAP3-207ENST00000551293 OGFRL1Q5TC84 451 aaPredicted RBP13.47□□□□□ -0.25
RPAP3-207ENST00000551293 FAM90A2PQ658T7 463 aa13.47□□□□□ -0.25
RPAP3-207ENST00000551293 ZNF575Q86XF7 245 aa13.47□□□□□ -0.25
RPAP3-207ENST00000551293 SCRT1Q9BWW7 348 aa13.47□□□□□ -0.25
RPAP3-207ENST00000551293 HSPG2P98160 4391 aa13.46□□□□□ -0.25
RPAP3-207ENST00000551293 TRAV14DV4A0A0A6YYC5 116 aa13.46□□□□□ -0.25
RPAP3-207ENST00000551293 TRAV1-2A0A0B4J238 106 aa13.46□□□□□ -0.25
RPAP3-207ENST00000551293 C15orf61A6NNL5 157 aa13.46□□□□□ -0.25
RPAP3-207ENST00000551293 APOHP02749 345 aaPredicted RBP13.46□□□□□ -0.25
RPAP3-207ENST00000551293 RPL11P62913 178 aaKnown RBP13.46□□□□□ -0.25
RPAP3-207ENST00000551293 ARL6IP1Q15041 203 aa13.46□□□□□ -0.25
RPAP3-207ENST00000551293 POU2AF1Q16633 256 aa13.46□□□□□ -0.25
RPAP3-207ENST00000551293 LILRB2Q8N423 598 aa13.46□□□□□ -0.25
RPAP3-207ENST00000551293 OR1L8Q8NGR8 309 aa13.46□□□□□ -0.25
RPAP3-207ENST00000551293 TPRKBQ9Y3C4 175 aa13.46□□□□□ -0.25
RPAP3-207ENST00000551293 ELOA3CA0A087WX78 387 aaPredicted RBP13.45□□□□□ -0.26
RPAP3-207ENST00000551293 ERICH4A6NGS2 130 aa13.45□□□□□ -0.26
RPAP3-207ENST00000551293 DNASE2O00115 360 aaPredicted RBP13.45□□□□□ -0.26
RPAP3-207ENST00000551293 RBFOX2O43251 390 aaKnown RBP eCLIP13.45□□□□□ -0.26
RPAP3-207ENST00000551293 PPYP01298 95 aa13.45□□□□□ -0.26
RPAP3-207ENST00000551293 CATR1Q13166 79 aa13.45□□□□□ -0.26
RPAP3-207ENST00000551293 AADACL3Q5VUY0 350 aa13.45□□□□□ -0.26
RPAP3-207ENST00000551293 ZNF818PQ6ZRF7 136 aa13.45□□□□□ -0.26
RPAP3-207ENST00000551293 TMEM17Q86X19 198 aa13.45□□□□□ -0.26
RPAP3-207ENST00000551293 ST8SIA2Q92186 375 aa13.45□□□□□ -0.26
RPAP3-207ENST00000551293 LSM10Q969L4 123 aaKnown RBP13.45□□□□□ -0.26
RPAP3-207ENST00000551293 SLC25A46Q96AG3 418 aa13.45□□□□□ -0.26
RPAP3-207ENST00000551293 MISP3Q96FF7 219 aa13.45□□□□□ -0.26
RPAP3-207ENST00000551293 MS4A6AQ9H2W1 248 aa13.45□□□□□ -0.26
RPAP3-207ENST00000551293 HRH4Q9H3N8 390 aa13.45□□□□□ -0.26
RPAP3-207ENST00000551293 DUSP21Q9H596 190 aa13.45□□□□□ -0.26
RPAP3-207ENST00000551293 NDUFA4L2Q9NRX3 87 aa13.45□□□□□ -0.26
RPAP3-207ENST00000551293 CLEC5AQ9NY25 188 aa13.45□□□□□ -0.26
RPAP3-207ENST00000551293 OR51B2Q9Y5P1 312 aa13.45□□□□□ -0.26
RPAP3-207ENST00000551293 DFFBO76075 338 aa13.44□□□□□ -0.26
RPAP3-207ENST00000551293 GIG44P09565 113 aaPredicted RBP13.44□□□□□ -0.26
RPAP3-207ENST00000551293 PAFAH1B2P68402 229 aa13.44□□□□□ -0.26
RPAP3-207ENST00000551293 RELQ04864 619 aaPredicted RBP13.44□□□□□ -0.26
RPAP3-207ENST00000551293 PVRIGQ6DKI7 326 aa13.44□□□□□ -0.26
RPAP3-207ENST00000551293 C22orf42Q6IC83 251 aa13.44□□□□□ -0.26
RPAP3-207ENST00000551293 STHQ8IWL8 128 aa13.44□□□□□ -0.26
RPAP3-207ENST00000551293 POM121L12Q8N7R1 296 aa13.44□□□□□ -0.26
RPAP3-207ENST00000551293 BEST4Q8NFU0 473 aa13.44□□□□□ -0.26
RPAP3-207ENST00000551293 CELA1Q9UNI1 258 aa13.44□□□□□ -0.26
RPAP3-207ENST00000551293 IGLV2-18A0A075B6J9 118 aa13.43□□□□□ -0.26
RPAP3-207ENST00000551293 CASQ2O14958 399 aaPredicted RBP13.43□□□□□ -0.26
RPAP3-207ENST00000551293 ST8SIA3O43173 380 aa13.43□□□□□ -0.26
RPAP3-207ENST00000551293 ERVK-16P61578 105 aa13.43□□□□□ -0.26
RPAP3-207ENST00000551293 CENPSQ8N2Z9 138 aa13.43□□□□□ -0.26
RPAP3-207ENST00000551293 OR10C1Q96KK4 312 aa13.43□□□□□ -0.26
RPAP3-207ENST00000551293 PLEKHA2Q9HB19 425 aa13.43□□□□□ -0.26
RPAP3-207ENST00000551293 RABAC1Q9UI14 185 aa13.43□□□□□ -0.26
RPAP3-207ENST00000551293 DBX1A6NMT0 343 aa13.42□□□□□ -0.26
RPAP3-207ENST00000551293 KNCNA6PVL3 124 aa13.42□□□□□ -0.26
RPAP3-207ENST00000551293 KRASP01116 189 aa13.42□□□□□ -0.26
RPAP3-207ENST00000551293 C4BPBP20851 252 aa13.42□□□□□ -0.26
RPAP3-207ENST00000551293 G6PCP35575 357 aa13.42□□□□□ -0.26
RPAP3-207ENST00000551293 THOC7Q6I9Y2 204 aaKnown RBP13.42□□□□□ -0.26
RPAP3-207ENST00000551293 HSD17B13Q7Z5P4 300 aaPredicted RBP13.42□□□□□ -0.26
RPAP3-207ENST00000551293 ZBTB34Q8NCN2 500 aa13.42□□□□□ -0.26
RPAP3-207ENST00000551293 DGCR14Q96DF8 476 aaKnown RBP13.42□□□□□ -0.26
RPAP3-207ENST00000551293 RNF126Q9BV68 326 aa13.42□□□□□ -0.26
RPAP3-207ENST00000551293 X6R8D5 127 aa13.42□□□□□ -0.26
RPAP3-207ENST00000551293 DEFB131BA0A096LNP1 70 aa13.41□□□□□ -0.26
RPAP3-207ENST00000551293 MARCH11A6NNE9 402 aa13.41□□□□□ -0.26
RPAP3-207ENST00000551293 EIF4EP06730 217 aaKnown RBP13.41□□□□□ -0.26
RPAP3-207ENST00000551293 MSMO1Q15800 293 aa13.41□□□□□ -0.26
RPAP3-207ENST00000551293 LGALS14Q8TCE9 139 aa13.41□□□□□ -0.26
RPAP3-207ENST00000551293 PINX1Q96BK5 328 aaKnown RBP13.41□□□□□ -0.26
RPAP3-207ENST00000551293 ATP6V0BQ99437 205 aa13.41□□□□□ -0.26
RPAP3-207ENST00000551293 NXF2Q9GZY0 626 aaKnown RBP13.41□□□□□ -0.26
RPAP3-207ENST00000551293 DAPK2Q9UIK4 370 aa13.41□□□□□ -0.26
RPAP3-207ENST00000551293 I3L2K1 104 aa13.4□□□□□ -0.26
RPAP3-207ENST00000551293 RLN1P04808 185 aa13.4□□□□□ -0.26
RPAP3-207ENST00000551293 MIFP14174 115 aa13.4□□□□□ -0.26
RPAP3-207ENST00000551293 LPAR6P43657 344 aa13.4□□□□□ -0.26
RPAP3-207ENST00000551293 MFAP4P55083 255 aa13.4□□□□□ -0.26
RPAP3-207ENST00000551293 C12orf74Q32Q52 190 aa13.4□□□□□ -0.26
RPAP3-207ENST00000551293 TOMM20LQ6UXN7 152 aa13.4□□□□□ -0.26
RPAP3-207ENST00000551293 PLA2G2EQ9NZK7 142 aa13.4□□□□□ -0.26
RPAP3-207ENST00000551293 COMMD9Q9P000 198 aa13.4□□□□□ -0.26
RPAP3-207ENST00000551293 TRAV18A0A075B6X5 111 aa13.39□□□□□ -0.27
RPAP3-207ENST00000551293 MEIS3P1A6NDR6 274 aa13.39□□□□□ -0.27
RPAP3-207ENST00000551293 SNAPC5O75971 98 aa13.39□□□□□ -0.27
RPAP3-207ENST00000551293 MT-CO2P00403 227 aa13.39□□□□□ -0.27
RPAP3-207ENST00000551293 P0DMU3 169 aa13.39□□□□□ -0.27
RPAP3-207ENST00000551293 FAM231AP0DMU4 169 aa13.39□□□□□ -0.27
RPAP3-207ENST00000551293 FAM231CP0DMU5 169 aa13.39□□□□□ -0.27
RPAP3-207ENST00000551293 PRSS48Q7RTY5 328 aa13.39□□□□□ -0.27
RPAP3-207ENST00000551293 TRPT1Q86TN4 253 aaKnown RBP13.39□□□□□ -0.27
RPAP3-207ENST00000551293 HOGA1Q86XE5 327 aa13.39□□□□□ -0.27
RPAP3-207ENST00000551293 FCAMRQ8WWV6 532 aa13.39□□□□□ -0.27
RPAP3-207ENST00000551293 VCXQ9H320 206 aa13.39□□□□□ -0.27
RPAP3-207ENST00000551293 NDUFB11Q9NX14 153 aa13.39□□□□□ -0.27
RPAP3-207ENST00000551293 TRDV1A0A1B0GX56 115 aa13.38□□□□□ -0.27
RPAP3-207ENST00000551293 GNG7O60262 68 aa13.38□□□□□ -0.27
RPAP3-207ENST00000551293 AMBPP02760 352 aa13.38□□□□□ -0.27
RPAP3-207ENST00000551293 GNRHRP30968 328 aa13.38□□□□□ -0.27
RPAP3-207ENST00000551293 AQP4P55087 323 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms