RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 SIGLEC16A6NMB1 481 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 RPL12P30050 165 aaKnown RBP3.43□□□□□ -1.86
CPSF6-206ENST00000550987 PYCR1P32322 319 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 RCVRNP35243 200 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 PMELP40967 661 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 AQP5P55064 265 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 TCL1AP56279 114 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 TAS2R41P59536 307 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 FAM53BQ14153 422 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 PMVKQ15126 192 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 HLA-DRB5Q30154 266 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 DEFB110Q30KQ9 67 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 STEAP4Q687X5 459 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 NANOGP8Q6NSW7 305 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 C4orf22Q6V702 233 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 ANGPTL5Q86XS5 388 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 TMEM256Q8N2U0 113 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 SPICQ8N5J4 248 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 OR2M7Q8NG81 312 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 GPR32P1Q8NGA4 272 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 OR4K5Q8NGD3 323 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 OR52P1PQ8NH57 321 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 OR51Q1Q8NH59 317 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 ZFAND1Q8TCF1 268 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 TNFAIP8L1Q8WVP5 186 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 DDIT4LQ96D03 193 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 MRAP2Q96G30 205 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 OR10C1Q96KK4 312 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 FOPNLQ96NB1 174 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 B9D2Q9BPU9 175 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 TCEAL7Q9BRU2 100 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 C2orf88Q9BSF0 95 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 GGTLC1Q9BX51 225 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 PECRQ9BY49 303 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 MIXL1Q9H2W2 232 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 VCXQ9H320 206 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 OR52D1Q9H346 318 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 PRO0628Q9UI54 55 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 TMEM14AQ9Y6G1 99 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 TMEM56-RWDD3S4R434 201 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 DNAH2Q9P225 4427 aa3.43□□□□□ -1.86
CPSF6-206ENST00000550987 IGLV3-16A0A075B6K0 115 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 ATP6V1G2-DDX39BF2Z307 99 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 SLC17A3O00476 420 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 GCM2O75603 506 aaPredicted RBP3.42□□□□□ -1.86
CPSF6-206ENST00000550987 SERPINB7O75635 380 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 S1PR2O95136 353 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 MT-CO2P00403 227 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 TRBV12-3P01733 135 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 SERPINA7P05543 415 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 MMP7P09237 267 aaPredicted RBP3.42□□□□□ -1.86
CPSF6-206ENST00000550987 PIRTP0C851 137 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 OR13C7P0DN81 318 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 PSMB9P28065 219 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 SLC6A1P30531 599 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 RAB38P57729 211 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 OR12D2P58182 307 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 RPL26P61254 145 aaKnown RBP3.42□□□□□ -1.86
CPSF6-206ENST00000550987 HIST1H3AP68431 136 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 H3F3AP84243 136 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 EPGNQ6UW88 154 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 CASP12Q6UXS9 341 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 HIST2H3AQ71DI3 136 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 C15orf56Q8N910 161 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 GATD1Q8NB37 220 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 OR13D1Q8NGV5 346 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 OR10K1Q8NGX5 313 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 OR13G1Q8NGZ3 307 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 OR13C6PQ8NH95 151 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 NAT14Q8WUY8 206 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 LCN9Q8WX39 176 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 PEBP4Q96S96 227 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 FAM96AQ9H5X1 160 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 TPT1P8Q9HAU6 139 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 ZNF355PQ9NSJ1 428 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 RBM22Q9NW64 420 aaKnown RBP eCLIP3.42□□□□□ -1.861e-9■□□□□ 8.7
CPSF6-206ENST00000550987 RBFOX1Q9NWB1 397 aaKnown RBP3.42□□□□□ -1.86
CPSF6-206ENST00000550987 RAB22AQ9UL26 194 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 RPL26L1Q9UNX3 145 aaKnown RBP3.42□□□□□ -1.86
CPSF6-206ENST00000550987 ANGPT4Q9Y264 503 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 PCM1Q15154 2024 aa3.42□□□□□ -1.86
CPSF6-206ENST00000550987 MED12Q93074 2177 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 TRAV8-6A0A0B4J262 113 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 A0A0U1RQV1 116 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 TMEM223A0PJW6 202 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 LINC00587B1AMM8 73 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 FAM25AB3EWG3 89 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 FAM25CB3EWG5 89 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 FAM25GB3EWG6 89 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 ZNF878C9JN71 531 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 J3QT63 122 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 K7EIL1 84 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 M0R1B8 84 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 M0R1X1 148 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 GPR31O00270 319 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 PSPHP1O15172 72 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 TPST1O60507 370 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 ATG12O94817 140 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 HLA-DQA1P01909 254 aa3.41□□□□□ -1.86
CPSF6-206ENST00000550987 COX6A1P12074 109 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms