RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 OMPP47874 163 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 AKR1D1P51857 326 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 NKX2-5P52952 324 aaPredicted RBP2.52□□□□□ -2.01
LIMA1-205ENST00000550592 SLC18A1P54219 525 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 TMEM33P57088 247 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 GNG11P61952 73 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 REEP5Q00765 189 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 FLI1Q01543 452 aaPredicted RBP2.52□□□□□ -2.01
LIMA1-205ENST00000550592 PRDX1Q06830 199 aaKnown RBP2.52□□□□□ -2.01
LIMA1-205ENST00000550592 IL15RAQ13261 267 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 TNXAQ16473 311 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 CEACAM16Q2WEN9 425 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 CDKL4Q5MAI5 379 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 CLEC12AQ5QGZ9 265 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 TIMM23BQ5SRD1 257 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 PP632Q6XCG6 107 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 TMEM136Q6ZRR5 245 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 GLT6D1Q7Z4J2 308 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 SGPP2Q8IWX5 399 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 CTAGE3PQ8IX95 158 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 RIBC1Q8N443 379 aaPredicted RBP2.52□□□□□ -2.01
LIMA1-205ENST00000550592 ZNF555Q8NEP9 628 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 FNDC9Q8TBE3 224 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 ISOC1Q96CN7 298 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 PPP1R2P1Q96PQ5 205 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 VAT1Q99536 393 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 SEC22CQ9BRL7 303 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 BCL2L14Q9BZR8 327 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 SLC19A3Q9BZV2 496 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 OR8D2Q9GZM6 311 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 C16orf95Q9H693 158 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 IFT46Q9NQC8 304 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 RSL24D1Q9UHA3 163 aaKnown RBP2.52□□□□□ -2.01
LIMA1-205ENST00000550592 ZNF229Q9UJW7 825 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 PRELID3BQ9Y3B1 194 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 ARHGAP32A7KAX9 2087 aa2.52□□□□□ -2.01
LIMA1-205ENST00000550592 A0A0A6YYH2 397 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 PQLC2LA1A4F0 135 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 IZUMO1RA6ND01 250 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 A6NJ64 397 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 C9JQL5 133 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 DHRS3O75911 302 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 PFN1P07737 140 aaKnown RBP2.51□□□□□ -2.01
LIMA1-205ENST00000550592 CD40LGP29965 261 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 MAGEA2P43356 314 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 MAGEA6P43360 314 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 CDC34P49427 236 aaPredicted RBP2.51□□□□□ -2.01
LIMA1-205ENST00000550592 RAB13P51153 203 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 ZNF83P51522 516 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 RPS11P62280 158 aaKnown RBP eCLIP2.51□□□□□ -2.01
LIMA1-205ENST00000550592 SLC35A2P78381 396 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 C2orf80Q0P641 193 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 SLAMF1Q13291 335 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 GPR176Q14439 515 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 POU6F1Q14863 301 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 USF2Q15853 346 aaPredicted RBP2.51□□□□□ -2.01
LIMA1-205ENST00000550592 ZNF404Q494X3 552 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 ATP6AP1LQ52LC2 224 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 MRPL2Q5T653 305 aaKnown RBP2.51□□□□□ -2.01
LIMA1-205ENST00000550592 RESP18Q5W5W9 173 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 ELP2Q6IA86 826 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 PLEKHG7Q6ZR37 379 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 KRTAP5-5Q701N2 237 aaPredicted RBP2.51□□□□□ -2.01
LIMA1-205ENST00000550592 VN1R4Q7Z5H5 301 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 RBM45Q8IUH3 476 aaKnown RBP2.51□□□□□ -2.01
LIMA1-205ENST00000550592 C1orf64Q8NEQ6 169 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 OR8J2Q8NGG1 315 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 YIPF5Q969M3 257 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 PRAP1Q96NZ9 151 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 PEBP4Q96S96 227 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 TCEAL7Q9BRU2 100 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 COPS4Q9BT78 406 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 PDCD10Q9BUL8 212 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 SNRNP25Q9BV90 132 aaKnown RBP2.51□□□□□ -2.01
LIMA1-205ENST00000550592 ALX4Q9H161 411 aaPredicted RBP2.51□□□□□ -2.01
LIMA1-205ENST00000550592 OR51B6Q9H340 312 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 Q9H521 79 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 PRTFDC1Q9NRG1 225 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 NLE1Q9NVX2 485 aaPredicted RBP2.51□□□□□ -2.01
LIMA1-205ENST00000550592 CLEC2DQ9UHP7 191 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 INSIG2Q9Y5U4 225 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 HECTD4Q9Y4D8 3996 aa2.51□□□□□ -2.01
LIMA1-205ENST00000550592 LOC389332A0A1B0GUA5 103 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 SMIM23A6NLE4 172 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 LINC00587B1AMM8 73 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 LYNX1G3V0Z9 82 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 NDUFS6O75380 124 aaKnown RBP2.5□□□□□ -2.01
LIMA1-205ENST00000550592 OR2A4O95047 310 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 NRASP01111 189 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 HRASP01112 189 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 KRASP01116 189 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 RLN2P04090 185 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 IFNA4P05014 189 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 S100A8P05109 93 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 CDK1P06493 297 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 LYNX1P0DP58 116 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 COX5BP10606 129 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 PRPS1L1P21108 318 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 CRABP1P29762 137 aa2.5□□□□□ -2.01
LIMA1-205ENST00000550592 CDKN2CP42773 168 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms