RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 R4GN34 69 aa3.15□□□□□ -1.91
HCFC2-204ENST00000550335 SPTBN4Q9H254 2564 aa3.15□□□□□ -1.91
HCFC2-204ENST00000550335 CNOT1A5YKK6 2376 aaKnown RBP3.15□□□□□ -1.91
HCFC2-204ENST00000550335 DMXL1Q9Y485 3027 aa3.14□□□□□ -1.91
HCFC2-204ENST00000550335 PRR14LQ5THK1 2151 aa3.14□□□□□ -1.91
HCFC2-204ENST00000550335 IGKV1D-37A0A075B6S9 117 aa3.14□□□□□ -1.91
HCFC2-204ENST00000550335 TRAV8-1A0A0A6YYK1 113 aa3.14□□□□□ -1.91
HCFC2-204ENST00000550335 TEX50A0A1B0GTY4 177 aa3.14□□□□□ -1.91
HCFC2-204ENST00000550335 SYNGR2O43760 224 aa3.14□□□□□ -1.91
HCFC2-204ENST00000550335 DEDDO75618 318 aa3.14□□□□□ -1.91
HCFC2-204ENST00000550335 REG1AP05451 166 aa3.14□□□□□ -1.91
HCFC2-204ENST00000550335 OR1E2P47887 323 aa3.14□□□□□ -1.91
HCFC2-204ENST00000550335 ZNF140P52738 457 aaPredicted RBP3.14□□□□□ -1.91
HCFC2-204ENST00000550335 TCL1AP56279 114 aa3.14□□□□□ -1.91
HCFC2-204ENST00000550335 CCL7P80098 99 aa3.14□□□□□ -1.91
HCFC2-204ENST00000550335 C1orf195Q5TG92 126 aa3.14□□□□□ -1.91
HCFC2-204ENST00000550335 LPCAT4Q643R3 524 aa3.14□□□□□ -1.91
HCFC2-204ENST00000550335 AMMECR1LQ6DCA0 310 aa3.14□□□□□ -1.91
HCFC2-204ENST00000550335 MSRB3Q8IXL7 192 aa3.14□□□□□ -1.91
HCFC2-204ENST00000550335 BAP18Q8IXM2 172 aa3.14□□□□□ -1.91
HCFC2-204ENST00000550335 C10orf67Q8IYJ2 551 aa3.14□□□□□ -1.91
HCFC2-204ENST00000550335 RPRMLQ8N4K4 120 aa3.14□□□□□ -1.91
HCFC2-204ENST00000550335 ZNF565Q8N9K5 539 aa3.14□□□□□ -1.91
HCFC2-204ENST00000550335 OR8J2Q8NGG1 315 aa3.14□□□□□ -1.91
HCFC2-204ENST00000550335 CCL4L1Q8NHW4 92 aa3.14□□□□□ -1.91
HCFC2-204ENST00000550335 OR52B2Q96RD2 323 aa3.14□□□□□ -1.91
HCFC2-204ENST00000550335 TMEM109Q9BVC6 243 aa3.14□□□□□ -1.91
HCFC2-204ENST00000550335 DDA1Q9BW61 102 aa3.14□□□□□ -1.91
HCFC2-204ENST00000550335 C3orf18Q9UK00 162 aa3.14□□□□□ -1.91
HCFC2-204ENST00000550335 DKKL1Q9UK85 242 aa3.14□□□□□ -1.91
HCFC2-204ENST00000550335 GUCA1BQ9UMX6 200 aa3.14□□□□□ -1.91
HCFC2-204ENST00000550335 POLR1DQ9Y2S0 133 aa3.14□□□□□ -1.91
HCFC2-204ENST00000550335 PTPRBP23467 1997 aa3.14□□□□□ -1.91
HCFC2-204ENST00000550335 NCOR2Q9Y618 2525 aa3.14□□□□□ -1.91
HCFC2-204ENST00000550335 KNL1Q8NG31 2342 aa3.13□□□□□ -1.91
HCFC2-204ENST00000550335 C5orf49A4QMS7 147 aa3.13□□□□□ -1.91
HCFC2-204ENST00000550335 A8MWP6 167 aa3.13□□□□□ -1.91
HCFC2-204ENST00000550335 RTL8CO15255 209 aa3.13□□□□□ -1.91
HCFC2-204ENST00000550335 CRYGDP07320 174 aa3.13□□□□□ -1.91
HCFC2-204ENST00000550335 PIRTP0C851 137 aa3.13□□□□□ -1.91
HCFC2-204ENST00000550335 HRES1P13985 223 aa3.13□□□□□ -1.91
HCFC2-204ENST00000550335 CDK2P24941 298 aa3.13□□□□□ -1.91
HCFC2-204ENST00000550335 NKX2-5P52952 324 aaPredicted RBP3.13□□□□□ -1.91
HCFC2-204ENST00000550335 HLA-DRB3P79483 266 aa3.13□□□□□ -1.91
HCFC2-204ENST00000550335 SARNPP82979 210 aaKnown RBP3.13□□□□□ -1.91
HCFC2-204ENST00000550335 DHRS2Q13268 280 aa3.13□□□□□ -1.91
HCFC2-204ENST00000550335 NOXRED1Q6NXP6 359 aa3.13□□□□□ -1.91
HCFC2-204ENST00000550335 C8orf74Q6P047 294 aa3.13□□□□□ -1.91
HCFC2-204ENST00000550335 OR5P3Q8WZ94 311 aa3.13□□□□□ -1.91
HCFC2-204ENST00000550335 ANP32BQ92688 251 aaKnown RBP3.13□□□□□ -1.91
HCFC2-204ENST00000550335 ITFG2Q969R8 447 aa3.13□□□□□ -1.91
HCFC2-204ENST00000550335 DCUN1D1Q96GG9 259 aa3.13□□□□□ -1.91
HCFC2-204ENST00000550335 BABAM2Q9NXR7 383 aa3.13□□□□□ -1.91
HCFC2-204ENST00000550335 MRPS16Q9Y3D3 137 aaKnown RBP3.13□□□□□ -1.91
HCFC2-204ENST00000550335 ANKRD36A6QL64 1941 aa3.13□□□□□ -1.91
HCFC2-204ENST00000550335 SEC16AO15027 2179 aa3.12□□□□□ -1.91
HCFC2-204ENST00000550335 KNTC1P50748 2209 aa3.12□□□□□ -1.91
HCFC2-204ENST00000550335 TNFSF15O95150 251 aa3.12□□□□□ -1.91
HCFC2-204ENST00000550335 ISG15P05161 165 aa3.12□□□□□ -1.91
HCFC2-204ENST00000550335 RPS3P23396 243 aaKnown RBP eCLIP3.12□□□□□ -1.91
HCFC2-204ENST00000550335 RPL22P35268 128 aaKnown RBP3.12□□□□□ -1.91
HCFC2-204ENST00000550335 AKR1C2P52895 323 aa3.12□□□□□ -1.91
HCFC2-204ENST00000550335 CEBPGP53567 150 aa3.12□□□□□ -1.91
HCFC2-204ENST00000550335 LINC00313P59037 77 aa3.12□□□□□ -1.91
HCFC2-204ENST00000550335 OR8G1Q15617 311 aa3.12□□□□□ -1.91
HCFC2-204ENST00000550335 ACSM3Q53FZ2 586 aa3.12□□□□□ -1.91
HCFC2-204ENST00000550335 ACSBG2Q5FVE4 666 aa3.12□□□□□ -1.91
HCFC2-204ENST00000550335 OR10K2Q6IF99 312 aa3.12□□□□□ -1.91
HCFC2-204ENST00000550335 CD200R1LQ6Q8B3 271 aa3.12□□□□□ -1.91
HCFC2-204ENST00000550335 TRAPPC5Q8IUR0 188 aa3.12□□□□□ -1.91
HCFC2-204ENST00000550335 OR13C4Q8NGS5 318 aa3.12□□□□□ -1.91
HCFC2-204ENST00000550335 OR2V1Q8NHB1 315 aa3.12□□□□□ -1.91
HCFC2-204ENST00000550335 PATE1Q8WXA2 126 aa3.12□□□□□ -1.91
HCFC2-204ENST00000550335 KIFC1Q9BW19 673 aa3.12□□□□□ -1.91
HCFC2-204ENST00000550335 HRASLSQ9HDD0 168 aa3.12□□□□□ -1.91
HCFC2-204ENST00000550335 PCYT1BQ9Y5K3 369 aaPredicted RBP3.12□□□□□ -1.91
HCFC2-204ENST00000550335 ARL5AQ9Y689 179 aa3.12□□□□□ -1.91
HCFC2-204ENST00000550335 FRYLO94915 3013 aa3.12□□□□□ -1.91
HCFC2-204ENST00000550335 CACNA1DQ01668 2161 aa3.11□□□□□ -1.91
HCFC2-204ENST00000550335 SHROOM3Q8TF72 1996 aa3.11□□□□□ -1.91
HCFC2-204ENST00000550335 ACACBO00763 2458 aa3.11□□□□□ -1.91
HCFC2-204ENST00000550335 IGKV2-24A0A0C4DH68 120 aa3.11□□□□□ -1.91
HCFC2-204ENST00000550335 IGSF23A1L1A6 192 aa3.11□□□□□ -1.91
HCFC2-204ENST00000550335 TLCD2A6NGC4 264 aa3.11□□□□□ -1.91
HCFC2-204ENST00000550335 PGRMC1O00264 195 aaKnown RBP3.11□□□□□ -1.91
HCFC2-204ENST00000550335 ACOX3O15254 700 aa3.11□□□□□ -1.91
HCFC2-204ENST00000550335 GSTZ1O43708 216 aaPredicted RBP3.11□□□□□ -1.91
HCFC2-204ENST00000550335 CD5P06127 495 aa3.11□□□□□ -1.91
HCFC2-204ENST00000550335 RPS17P08708 135 aaKnown RBP3.11□□□□□ -1.91
HCFC2-204ENST00000550335 CCL4P13236 92 aa3.11□□□□□ -1.91
HCFC2-204ENST00000550335 OGNP20774 298 aaKnown RBP3.11□□□□□ -1.91
HCFC2-204ENST00000550335 CAPZBP47756 277 aa3.11□□□□□ -1.91
HCFC2-204ENST00000550335 REG1BP48304 166 aa3.11□□□□□ -1.91
HCFC2-204ENST00000550335 FABP5Q01469 135 aa3.11□□□□□ -1.91
HCFC2-204ENST00000550335 POU6F1Q14863 301 aa3.11□□□□□ -1.91
HCFC2-204ENST00000550335 JOSD1Q15040 202 aaPredicted RBP3.11□□□□□ -1.91
HCFC2-204ENST00000550335 CCDC121Q6ZUS5 278 aa3.11□□□□□ -1.91
HCFC2-204ENST00000550335 SCXQ7RTU7 201 aa3.11□□□□□ -1.91
HCFC2-204ENST00000550335 OOSP2Q86WS3 158 aa3.11□□□□□ -1.91
HCFC2-204ENST00000550335 GID4Q8IVV7 300 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms