RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 K7EQG2 157 aa6.3□□□□□ -1.4
UBE2N-203ENST00000549490 EIF4EP06730 217 aaKnown RBP6.3□□□□□ -1.4
UBE2N-203ENST00000549490 UCHL1P09936 223 aa6.3□□□□□ -1.4
UBE2N-203ENST00000549490 ZNF688P0C7X2 276 aa6.3□□□□□ -1.4
UBE2N-203ENST00000549490 TRAPPC2P0DI81 140 aa6.3□□□□□ -1.4
UBE2N-203ENST00000549490 TRAPPC2BP0DI82 140 aa6.3□□□□□ -1.4
UBE2N-203ENST00000549490 HTN3P15516 51 aa6.3□□□□□ -1.4
UBE2N-203ENST00000549490 TALDO1P37837 337 aa6.3□□□□□ -1.4
UBE2N-203ENST00000549490 EMP1P54849 157 aa6.3□□□□□ -1.4
UBE2N-203ENST00000549490 WNT4P56705 351 aa6.3□□□□□ -1.4
UBE2N-203ENST00000549490 TMEM88Q6PEY1 159 aa6.3□□□□□ -1.4
UBE2N-203ENST00000549490 TOMM20LQ6UXN7 152 aa6.3□□□□□ -1.4
UBE2N-203ENST00000549490 SPAG16Q8N0X2 631 aa6.3□□□□□ -1.4
UBE2N-203ENST00000549490 LYPD1Q8N2G4 141 aa6.3□□□□□ -1.4
UBE2N-203ENST00000549490 ZNRF2Q8NHG8 242 aa6.3□□□□□ -1.4
UBE2N-203ENST00000549490 FAM3DQ96BQ1 224 aa6.3□□□□□ -1.4
UBE2N-203ENST00000549490 NXF2Q9GZY0 626 aaKnown RBP6.3□□□□□ -1.4
UBE2N-203ENST00000549490 AK6Q9Y3D8 172 aaKnown RBP6.3□□□□□ -1.4
UBE2N-203ENST00000549490 NACAE9PAV3 2078 aa6.3□□□□□ -1.4
UBE2N-203ENST00000549490 HMCN2Q8NDA2 5059 aa6.29□□□□□ -1.4
UBE2N-203ENST00000549490 TMEM272A0A1B0GTI8 110 aa6.29□□□□□ -1.4
UBE2N-203ENST00000549490 TNFSF12O43508 249 aa6.29□□□□□ -1.4
UBE2N-203ENST00000549490 FGF2P09038 288 aa6.29□□□□□ -1.4
UBE2N-203ENST00000549490 HIST1H1DP16402 221 aaKnown RBP6.29□□□□□ -1.4
UBE2N-203ENST00000549490 MFAP4P55083 255 aa6.29□□□□□ -1.4
UBE2N-203ENST00000549490 TAS2R31P59538 309 aa6.29□□□□□ -1.4
UBE2N-203ENST00000549490 POU2AF1Q16633 256 aa6.29□□□□□ -1.4
UBE2N-203ENST00000549490 Q5VSD8 79 aa6.29□□□□□ -1.4
UBE2N-203ENST00000549490 THOC7Q6I9Y2 204 aaKnown RBP6.29□□□□□ -1.4
UBE2N-203ENST00000549490 HSD17B13Q7Z5P4 300 aaPredicted RBP6.29□□□□□ -1.4
UBE2N-203ENST00000549490 OR10R2Q8NGX6 335 aa6.29□□□□□ -1.4
UBE2N-203ENST00000549490 GRAMD2BQ96HH9 432 aa6.29□□□□□ -1.4
UBE2N-203ENST00000549490 RAB40CQ96S21 281 aa6.29□□□□□ -1.4
UBE2N-203ENST00000549490 GINS3Q9BRX5 216 aa6.29□□□□□ -1.4
UBE2N-203ENST00000549490 NIPSNAP3BQ9BS92 247 aa6.29□□□□□ -1.4
UBE2N-203ENST00000549490 ATG101Q9BSB4 218 aa6.29□□□□□ -1.4
UBE2N-203ENST00000549490 C9orf16Q9BUW7 83 aa6.29□□□□□ -1.4
UBE2N-203ENST00000549490 NDUFA4L2Q9NRX3 87 aa6.29□□□□□ -1.4
UBE2N-203ENST00000549490 TMEM140Q9NV12 185 aa6.29□□□□□ -1.4
UBE2N-203ENST00000549490 XCL2Q9UBD3 114 aa6.29□□□□□ -1.4
UBE2N-203ENST00000549490 DKK2Q9UBU2 259 aa6.29□□□□□ -1.4
UBE2N-203ENST00000549490 ELF5Q9UKW6 265 aaPredicted RBP6.29□□□□□ -1.4
UBE2N-203ENST00000549490 RAB22AQ9UL26 194 aa6.29□□□□□ -1.4
UBE2N-203ENST00000549490 TMEM189A5PLL7 270 aa6.28□□□□□ -1.4
UBE2N-203ENST00000549490 MYL12BO14950 172 aa6.28□□□□□ -1.4
UBE2N-203ENST00000549490 RBFOX2O43251 390 aaKnown RBP eCLIP6.28□□□□□ -1.4
UBE2N-203ENST00000549490 IGHV3-48P01763 117 aa6.28□□□□□ -1.4
UBE2N-203ENST00000549490 CTXN2P0C2S0 81 aa6.28□□□□□ -1.4
UBE2N-203ENST00000549490 NQO2P16083 231 aa6.28□□□□□ -1.4
UBE2N-203ENST00000549490 DTYMKP23919 212 aa6.28□□□□□ -1.4
UBE2N-203ENST00000549490 XGP55808 180 aa6.28□□□□□ -1.4
UBE2N-203ENST00000549490 FAM222AQ5U5X8 452 aa6.28□□□□□ -1.4
UBE2N-203ENST00000549490 ZNF705AQ6ZN79 300 aaPredicted RBP6.28□□□□□ -1.4
UBE2N-203ENST00000549490 NANOGP1Q8N7R0 232 aa6.28□□□□□ -1.4
UBE2N-203ENST00000549490 STXBP6Q8NFX7 210 aa6.28□□□□□ -1.4
UBE2N-203ENST00000549490 OR1L8Q8NGR8 309 aa6.28□□□□□ -1.4
UBE2N-203ENST00000549490 LSM10Q969L4 123 aaKnown RBP6.28□□□□□ -1.4
UBE2N-203ENST00000549490 SLC25A46Q96AG3 418 aa6.28□□□□□ -1.4
UBE2N-203ENST00000549490 NEU1Q99519 415 aa6.28□□□□□ -1.4
UBE2N-203ENST00000549490 TXN2Q99757 166 aa6.28□□□□□ -1.4
UBE2N-203ENST00000549490 HINT2Q9BX68 163 aa6.28□□□□□ -1.4
UBE2N-203ENST00000549490 C1QTNF4Q9BXJ3 329 aa6.28□□□□□ -1.4
UBE2N-203ENST00000549490 DCSTAMPQ9H295 470 aa6.28□□□□□ -1.4
UBE2N-203ENST00000549490 ZNF705FA8MVS1 300 aaPredicted RBP6.27□□□□□ -1.41
UBE2N-203ENST00000549490 I3L2K1 104 aa6.27□□□□□ -1.41
UBE2N-203ENST00000549490 SULT1C2O00338 296 aa6.27□□□□□ -1.41
UBE2N-203ENST00000549490 ATP8B1O43520 1251 aa6.27□□□□□ -1.41
UBE2N-203ENST00000549490 HPRT1P00492 218 aa6.27□□□□□ -1.41
UBE2N-203ENST00000549490 ZNF705DP0CH99 300 aaPredicted RBP6.27□□□□□ -1.41
UBE2N-203ENST00000549490 ZNF705BP0CI00 300 aaPredicted RBP6.27□□□□□ -1.41
UBE2N-203ENST00000549490 GADD45AP24522 165 aa6.27□□□□□ -1.41
UBE2N-203ENST00000549490 RCN1Q15293 331 aa6.27□□□□□ -1.41
UBE2N-203ENST00000549490 C15orf53Q8NAA6 179 aa6.27□□□□□ -1.41
UBE2N-203ENST00000549490 ZNF555Q8NEP9 628 aa6.27□□□□□ -1.41
UBE2N-203ENST00000549490 DMBX1Q8NFW5 382 aa6.27□□□□□ -1.41
UBE2N-203ENST00000549490 DCANP1Q8TF63 244 aa6.27□□□□□ -1.41
UBE2N-203ENST00000549490 FRZBQ92765 325 aa6.27□□□□□ -1.41
UBE2N-203ENST00000549490 TMEM231Q9H6L2 316 aa6.27□□□□□ -1.41
UBE2N-203ENST00000549490 ZFAND3Q9H8U3 227 aa6.27□□□□□ -1.41
UBE2N-203ENST00000549490 CCL28Q9NRJ3 127 aa6.27□□□□□ -1.41
UBE2N-203ENST00000549490 TEX48A0A1B0GUV7 120 aa6.26□□□□□ -1.41
UBE2N-203ENST00000549490 SMIM9A6NGZ8 99 aa6.26□□□□□ -1.41
UBE2N-203ENST00000549490 J3QL48 77 aa6.26□□□□□ -1.41
UBE2N-203ENST00000549490 GNG7O60262 68 aa6.26□□□□□ -1.41
UBE2N-203ENST00000549490 MT-CO2P00403 227 aa6.26□□□□□ -1.41
UBE2N-203ENST00000549490 FGF9P31371 208 aaPredicted RBP6.26□□□□□ -1.41
UBE2N-203ENST00000549490 NUTF2P61970 127 aaKnown RBP6.26□□□□□ -1.41
UBE2N-203ENST00000549490 OXA1LQ15070 435 aa6.26□□□□□ -1.41
UBE2N-203ENST00000549490 HES5Q5TA89 166 aa6.26□□□□□ -1.41
UBE2N-203ENST00000549490 CNIH2Q6PI25 160 aa6.26□□□□□ -1.41
UBE2N-203ENST00000549490 TMEM91Q6ZNR0 172 aa6.26□□□□□ -1.41
UBE2N-203ENST00000549490 OR1P1Q8NH06 330 aa6.26□□□□□ -1.41
UBE2N-203ENST00000549490 SECTM1Q8WVN6 248 aa6.26□□□□□ -1.41
UBE2N-203ENST00000549490 TMEM203Q969S6 136 aa6.26□□□□□ -1.41
UBE2N-203ENST00000549490 MISP3Q96FF7 219 aa6.26□□□□□ -1.41
UBE2N-203ENST00000549490 MDFICQ9P1T7 246 aa6.26□□□□□ -1.41
UBE2N-203ENST00000549490 NSG2Q9Y328 171 aa6.26□□□□□ -1.41
UBE2N-203ENST00000549490 PUS1Q9Y606 427 aaKnown RBP eCLIP6.26□□□□□ -1.41
UBE2N-203ENST00000549490 RFNGQ9Y644 331 aa6.26□□□□□ -1.41
UBE2N-203ENST00000549490 A0A1B0GU03 582 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms