RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 PTPN13Q12923 2485 aa9.13□□□□□ -0.95
LINC00661-204ENST00000549354 PMS2P5A8MQ11 134 aa9.13□□□□□ -0.95
LINC00661-204ENST00000549354 RNF212BA8MTL3 300 aa9.13□□□□□ -0.95
LINC00661-204ENST00000549354 CFHR2P36980 270 aa9.13□□□□□ -0.95
LINC00661-204ENST00000549354 KRTDAPP60985 99 aa9.13□□□□□ -0.95
LINC00661-204ENST00000549354 CMTM2Q8TAZ6 248 aa9.13□□□□□ -0.95
LINC00661-204ENST00000549354 H1FXQ92522 213 aaKnown RBP9.13□□□□□ -0.95
LINC00661-204ENST00000549354 ANAPC16Q96DE5 110 aa9.13□□□□□ -0.95
LINC00661-204ENST00000549354 SFRP2Q96HF1 295 aa9.13□□□□□ -0.95
LINC00661-204ENST00000549354 NOL4LQ96MY1 436 aaPredicted RBP9.13□□□□□ -0.95
LINC00661-204ENST00000549354 OR2V2Q96R30 315 aa9.13□□□□□ -0.95
LINC00661-204ENST00000549354 MS4A5Q9H3V2 200 aa9.13□□□□□ -0.95
LINC00661-204ENST00000549354 POLQO75417 2590 aa9.13□□□□□ -0.95
LINC00661-204ENST00000549354 USP9YO00507 2555 aaPredicted RBP9.12□□□□□ -0.95
LINC00661-204ENST00000549354 FAM208BQ5VWN6 2430 aa9.12□□□□□ -0.95
LINC00661-204ENST00000549354 C15orf62A8K5M9 175 aa9.12□□□□□ -0.95
LINC00661-204ENST00000549354 PMCHP20382 165 aa9.12□□□□□ -0.95
LINC00661-204ENST00000549354 PRDX2P32119 198 aa9.12□□□□□ -0.95
LINC00661-204ENST00000549354 CCKARP32238 428 aa9.12□□□□□ -0.95
LINC00661-204ENST00000549354 CD177Q8N6Q3 437 aa9.12□□□□□ -0.95
LINC00661-204ENST00000549354 UHRF2Q96PU4 802 aa9.12□□□□□ -0.95
LINC00661-204ENST00000549354 WIPI2Q9Y4P8 454 aa9.12□□□□□ -0.95
LINC00661-204ENST00000549354 C17orf112F2Z3M2 114 aa9.12□□□□□ -0.95
LINC00661-204ENST00000549354 FCN1O00602 326 aa9.12□□□□□ -0.95
LINC00661-204ENST00000549354 SERF1AO75920 110 aa9.12□□□□□ -0.95
LINC00661-204ENST00000549354 CD24P25063 80 aa9.12□□□□□ -0.95
LINC00661-204ENST00000549354 SPCS3P61009 180 aa9.12□□□□□ -0.95
LINC00661-204ENST00000549354 WDR82Q6UXN9 313 aa9.12□□□□□ -0.95
LINC00661-204ENST00000549354 MOB1BQ7L9L4 216 aa9.12□□□□□ -0.95
LINC00661-204ENST00000549354 OR10W1Q8NGF6 305 aa9.12□□□□□ -0.95
LINC00661-204ENST00000549354 RNASEH2CQ8TDP1 164 aaKnown RBP9.12□□□□□ -0.95
LINC00661-204ENST00000549354 GGCTO75223 188 aaKnown RBP9.11□□□□□ -0.95
LINC00661-204ENST00000549354 HPRT1P00492 218 aa9.11□□□□□ -0.95
LINC00661-204ENST00000549354 MBP02144 154 aa9.11□□□□□ -0.95
LINC00661-204ENST00000549354 ERVFC1-1P60608 527 aa9.11□□□□□ -0.95
LINC00661-204ENST00000549354 RPL31P62899 125 aaKnown RBP9.11□□□□□ -0.95
LINC00661-204ENST00000549354 FAM27E3Q08E93 113 aa9.11□□□□□ -0.95
LINC00661-204ENST00000549354 C1orf229Q6ZS94 237 aaPredicted RBP9.11□□□□□ -0.95
LINC00661-204ENST00000549354 C22orf34Q6ZV56 151 aa9.11□□□□□ -0.95
LINC00661-204ENST00000549354 FAM216BQ8N7L0 139 aa9.11□□□□□ -0.95
LINC00661-204ENST00000549354 AGMATQ9BSE5 352 aa9.11□□□□□ -0.95
LINC00661-204ENST00000549354 RNASE7Q9H1E1 156 aaKnown RBP9.11□□□□□ -0.95
LINC00661-204ENST00000549354 MBNL3Q9NUK0 354 aaKnown RBP9.11□□□□□ -0.95
LINC00661-204ENST00000549354 RAXQ9Y2V3 346 aa9.11□□□□□ -0.95
LINC00661-204ENST00000549354 PXMP4Q9Y6I8 212 aa9.11□□□□□ -0.95
LINC00661-204ENST00000549354 M0R143 59 aa9.11□□□□□ -0.95
LINC00661-204ENST00000549354 TMPRSS2O15393 492 aa9.11□□□□□ -0.95
LINC00661-204ENST00000549354 FAM87AP0C7U9 286 aa9.11□□□□□ -0.95
LINC00661-204ENST00000549354 ERVK-16P61578 105 aa9.11□□□□□ -0.95
LINC00661-204ENST00000549354 C10orf55Q5SWW7 151 aa9.11□□□□□ -0.95
LINC00661-204ENST00000549354 ST6GALNAC3Q8NDV1 305 aa9.11□□□□□ -0.95
LINC00661-204ENST00000549354 YTHDF2Q9Y5A9 579 aaKnown RBP9.11□□□□□ -0.95
LINC00661-204ENST00000549354 ENSAO43768 121 aaKnown RBP9.11□□□□□ -0.95
LINC00661-204ENST00000549354 MMP23AO75900 390 aa9.11□□□□□ -0.95
LINC00661-204ENST00000549354 WNT2P09544 360 aa9.11□□□□□ -0.95
LINC00661-204ENST00000549354 IRF2P14316 349 aa9.11□□□□□ -0.95
LINC00661-204ENST00000549354 PSG5Q15238 335 aa9.11□□□□□ -0.95
LINC00661-204ENST00000549354 ACP7Q6ZNF0 438 aa9.11□□□□□ -0.95
LINC00661-204ENST00000549354 Q6ZWC4 215 aa9.11□□□□□ -0.95
LINC00661-204ENST00000549354 NUP37Q8NFH4 326 aa9.11□□□□□ -0.95
LINC00661-204ENST00000549354 ITLN1Q8WWA0 313 aa9.11□□□□□ -0.95
LINC00661-204ENST00000549354 S1PR3Q99500 378 aa9.11□□□□□ -0.95
LINC00661-204ENST00000549354 PROP1O75360 226 aa9.1□□□□□ -0.95
LINC00661-204ENST00000549354 CRISP2P16562 243 aa9.1□□□□□ -0.95
LINC00661-204ENST00000549354 IGFBP2P18065 325 aa9.1□□□□□ -0.95
LINC00661-204ENST00000549354 PRR30Q53SZ7 412 aaPredicted RBP9.1□□□□□ -0.95
LINC00661-204ENST00000549354 TREML4Q6UXN2 200 aa9.1□□□□□ -0.95
LINC00661-204ENST00000549354 FAM90A1Q86YD7 464 aa9.1□□□□□ -0.95
LINC00661-204ENST00000549354 OR8I2Q8N0Y5 310 aa9.1□□□□□ -0.95
LINC00661-204ENST00000549354 FAM19A2Q8N3H0 131 aa9.1□□□□□ -0.95
LINC00661-204ENST00000549354 OR10G8Q8NGN5 311 aa9.1□□□□□ -0.95
LINC00661-204ENST00000549354 PLEKHA3Q9HB20 300 aa9.1□□□□□ -0.95
LINC00661-204ENST00000549354 ENY2Q9NPA8 101 aa9.1□□□□□ -0.95
LINC00661-204ENST00000549354 TET2Q6N021 2002 aaPredicted RBP9.1□□□□□ -0.95
LINC00661-204ENST00000549354 TRAV5A0A0B4J249 113 aa9.1□□□□□ -0.95
LINC00661-204ENST00000549354 SNURFLB1AK76 121 aa9.1□□□□□ -0.95
LINC00661-204ENST00000549354 C16orf97H3BN30 126 aa9.1□□□□□ -0.95
LINC00661-204ENST00000549354 CRYBB3P26998 211 aa9.1□□□□□ -0.95
LINC00661-204ENST00000549354 SUMO1P63165 101 aaKnown RBP9.1□□□□□ -0.95
LINC00661-204ENST00000549354 BTF3L4Q96K17 158 aa9.1□□□□□ -0.95
LINC00661-204ENST00000549354 HIPK2Q9H2X6 1198 aa9.1□□□□□ -0.95
LINC00661-204ENST00000549354 SORL1Q92673 2214 aa9.1□□□□□ -0.95
LINC00661-204ENST00000549354 BSNQ9UPA5 3926 aa9.1□□□□□ -0.95
LINC00661-204ENST00000549354 NPSP0C0P6 89 aa9.1□□□□□ -0.95
LINC00661-204ENST00000549354 CD40P25942 277 aa9.1□□□□□ -0.95
LINC00661-204ENST00000549354 SRP14P37108 136 aaKnown RBP9.1□□□□□ -0.95
LINC00661-204ENST00000549354 RPL15P61313 204 aaKnown RBP9.1□□□□□ -0.95
LINC00661-204ENST00000549354 RBPJQ06330 500 aa9.1□□□□□ -0.95
LINC00661-204ENST00000549354 BLNKQ8WV28 456 aa9.1□□□□□ -0.95
LINC00661-204ENST00000549354 VKORC1Q9BQB6 163 aa9.1□□□□□ -0.95
LINC00661-204ENST00000549354 MRPL18Q9H0U6 180 aaKnown RBP9.1□□□□□ -0.95
LINC00661-204ENST00000549354 OOEPA6NGQ2 149 aa9.09□□□□□ -0.95
LINC00661-204ENST00000549354 IGKV1-16P04430 117 aa9.09□□□□□ -0.95
LINC00661-204ENST00000549354 ATP6V1FQ16864 119 aa9.09□□□□□ -0.95
LINC00661-204ENST00000549354 MIR17HGQ75NE6 70 aa9.09□□□□□ -0.95
LINC00661-204ENST00000549354 OR1L6Q8NGR2 347 aa9.09□□□□□ -0.95
LINC00661-204ENST00000549354 CCL17Q92583 94 aa9.09□□□□□ -0.95
LINC00661-204ENST00000549354 NEU1Q99519 415 aa9.09□□□□□ -0.95
LINC00661-204ENST00000549354 MGST2Q99735 147 aa9.09□□□□□ -0.95
LINC00661-204ENST00000549354 TMEM140Q9NV12 185 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms