RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 HLA-AP01891 365 aaKnown RBP9.1□□□□□ -0.95
DDX54-206ENST00000549271 CD74P04233 296 aa9.1□□□□□ -0.95
DDX54-206ENST00000549271 TRAPPC2P0DI81 140 aa9.1□□□□□ -0.95
DDX54-206ENST00000549271 TRAPPC2BP0DI82 140 aa9.1□□□□□ -0.95
DDX54-206ENST00000549271 HIST1H1BP16401 226 aaKnown RBP9.1□□□□□ -0.95
DDX54-206ENST00000549271 PTBP1P26599 531 aaKnown RBP eCLIP9.1□□□□□ -0.95
DDX54-206ENST00000549271 ERVK-16P61578 105 aa9.1□□□□□ -0.95
DDX54-206ENST00000549271 WT1-ASQ06250 92 aa9.1□□□□□ -0.95
DDX54-206ENST00000549271 RNASE10Q5GAN6 216 aaKnown RBP9.1□□□□□ -0.95
DDX54-206ENST00000549271 TMEM229BQ8NBD8 167 aa9.1□□□□□ -0.95
DDX54-206ENST00000549271 OR1L8Q8NGR8 309 aa9.1□□□□□ -0.95
DDX54-206ENST00000549271 C15orf40Q8WUR7 153 aa9.1□□□□□ -0.95
DDX54-206ENST00000549271 SEC22AQ96IW7 307 aa9.1□□□□□ -0.95
DDX54-206ENST00000549271 QTRT1Q9BXR0 403 aaKnown RBP9.1□□□□□ -0.95
DDX54-206ENST00000549271 SRD5A3Q9H8P0 318 aa9.1□□□□□ -0.95
DDX54-206ENST00000549271 CCDC59Q9P031 241 aaKnown RBP9.1□□□□□ -0.95
DDX54-206ENST00000549271 HSPG2P98160 4391 aa9.09□□□□□ -0.95
DDX54-206ENST00000549271 MFSD2BA6NFX1 497 aa9.09□□□□□ -0.95
DDX54-206ENST00000549271 DBX1A6NMT0 343 aa9.09□□□□□ -0.95
DDX54-206ENST00000549271 A8MWP6 167 aa9.09□□□□□ -0.95
DDX54-206ENST00000549271 GABARAPH6UMI1 98 aa9.09□□□□□ -0.95
DDX54-206ENST00000549271 DHFRP00374 187 aa9.09□□□□□ -0.95
DDX54-206ENST00000549271 SERPINE2P07093 398 aa9.09□□□□□ -0.95
DDX54-206ENST00000549271 DEFA4P12838 97 aa9.09□□□□□ -0.95
DDX54-206ENST00000549271 PI3P19957 117 aa9.09□□□□□ -0.95
DDX54-206ENST00000549271 TBPP20226 339 aa9.09□□□□□ -0.95
DDX54-206ENST00000549271 CBLN1P23435 193 aa9.09□□□□□ -0.95
DDX54-206ENST00000549271 RND3P61587 244 aa9.09□□□□□ -0.95
DDX54-206ENST00000549271 PRR20EP86478 221 aa9.09□□□□□ -0.95
DDX54-206ENST00000549271 PRR20CP86479 221 aa9.09□□□□□ -0.95
DDX54-206ENST00000549271 PRR20DP86480 221 aa9.09□□□□□ -0.95
DDX54-206ENST00000549271 PRR20BP86481 221 aa9.09□□□□□ -0.95
DDX54-206ENST00000549271 PRR20AP86496 221 aa9.09□□□□□ -0.95
DDX54-206ENST00000549271 CLEC19AQ6UXS0 136 aa9.09□□□□□ -0.95
DDX54-206ENST00000549271 SLC16A13Q7RTY0 426 aa9.09□□□□□ -0.95
DDX54-206ENST00000549271 ARRDC1Q8N5I2 433 aa9.09□□□□□ -0.95
DDX54-206ENST00000549271 WFDC10AQ9H1F0 79 aa9.09□□□□□ -0.95
DDX54-206ENST00000549271 OR51B2Q9Y5P1 312 aa9.09□□□□□ -0.95
DDX54-206ENST00000549271 A0A0J9YWU9 116 aa9.08□□□□□ -0.96
DDX54-206ENST00000549271 TMEM213A2RRL7 107 aa9.08□□□□□ -0.96
DDX54-206ENST00000549271 H3BMQ9 156 aa9.08□□□□□ -0.96
DDX54-206ENST00000549271 SNAPC5O75971 98 aa9.08□□□□□ -0.96
DDX54-206ENST00000549271 CLEC3BP05452 202 aa9.08□□□□□ -0.96
DDX54-206ENST00000549271 OR13C7P0DN81 318 aa9.08□□□□□ -0.96
DDX54-206ENST00000549271 PGAM2P15259 253 aa9.08□□□□□ -0.96
DDX54-206ENST00000549271 EDN2P20800 178 aa9.08□□□□□ -0.96
DDX54-206ENST00000549271 S100GP29377 79 aa9.08□□□□□ -0.96
DDX54-206ENST00000549271 MFAP2P55001 183 aa9.08□□□□□ -0.96
DDX54-206ENST00000549271 SSBP1Q04837 148 aaKnown RBP9.08□□□□□ -0.96
DDX54-206ENST00000549271 TNFRSF9Q07011 255 aa9.08□□□□□ -0.96
DDX54-206ENST00000549271 GUCA2BQ16661 112 aa9.08□□□□□ -0.96
DDX54-206ENST00000549271 FAM106AQ4KMX7 169 aa9.08□□□□□ -0.96
DDX54-206ENST00000549271 THOC7Q6I9Y2 204 aaKnown RBP9.08□□□□□ -0.96
DDX54-206ENST00000549271 TERB2Q8NHR7 220 aa9.08□□□□□ -0.96
DDX54-206ENST00000549271 MRGPRFQ96AM1 343 aa9.08□□□□□ -0.96
DDX54-206ENST00000549271 EEF1AKMT3Q96AZ1 226 aa9.08□□□□□ -0.96
DDX54-206ENST00000549271 WDR89Q96FK6 387 aaPredicted RBP9.08□□□□□ -0.96
DDX54-206ENST00000549271 ZNF486Q96H40 463 aaPredicted RBP9.08□□□□□ -0.96
DDX54-206ENST00000549271 DIRAS2Q96HU8 199 aa9.08□□□□□ -0.96
DDX54-206ENST00000549271 SOSTQ9BQB4 213 aa9.08□□□□□ -0.96
DDX54-206ENST00000549271 SLIRPQ9GZT3 109 aaKnown RBP9.08□□□□□ -0.96
DDX54-206ENST00000549271 TMEM14BQ9NUH8 114 aa9.08□□□□□ -0.96
DDX54-206ENST00000549271 TRBV7-1A0A0A6YYK4 115 aa9.07□□□□□ -0.96
DDX54-206ENST00000549271 C15orf61A6NNL5 157 aa9.07□□□□□ -0.96
DDX54-206ENST00000549271 CTDSPLO15194 276 aa9.07□□□□□ -0.96
DDX54-206ENST00000549271 RAB3DO95716 219 aa9.07□□□□□ -0.96
DDX54-206ENST00000549271 ATF4P18848 351 aaPredicted RBP9.07□□□□□ -0.96
DDX54-206ENST00000549271 ARL3P36405 182 aa9.07□□□□□ -0.96
DDX54-206ENST00000549271 PIGPP57054 158 aa9.07□□□□□ -0.96
DDX54-206ENST00000549271 TAS2R19P59542 299 aa9.07□□□□□ -0.96
DDX54-206ENST00000549271 MRPS10P82664 201 aaKnown RBP9.07□□□□□ -0.96
DDX54-206ENST00000549271 ZNF57Q68EA5 555 aaPredicted RBP9.07□□□□□ -0.96
DDX54-206ENST00000549271 STEAP1BQ6NZ63 245 aa9.07□□□□□ -0.96
DDX54-206ENST00000549271 TMEM61Q8N0U2 210 aa9.07□□□□□ -0.96
DDX54-206ENST00000549271 GDPD1Q8N9F7 314 aa9.07□□□□□ -0.96
DDX54-206ENST00000549271 ZNF502Q8TBZ5 544 aa9.07□□□□□ -0.96
DDX54-206ENST00000549271 SMIM4Q8WVI0 70 aa9.07□□□□□ -0.96
DDX54-206ENST00000549271 TP53RKQ96S44 253 aa9.07□□□□□ -0.96
DDX54-206ENST00000549271 HINT2Q9BX68 163 aa9.07□□□□□ -0.96
DDX54-206ENST00000549271 NXF2Q9GZY0 626 aaKnown RBP9.07□□□□□ -0.96
DDX54-206ENST00000549271 FKBP11Q9NYL4 201 aa9.07□□□□□ -0.96
DDX54-206ENST00000549271 PRNDQ9UKY0 176 aa9.07□□□□□ -0.96
DDX54-206ENST00000549271 TRAV25A0A0B4J276 109 aa9.06□□□□□ -0.96
DDX54-206ENST00000549271 IGKV1-5P01602 117 aa9.06□□□□□ -0.96
DDX54-206ENST00000549271 P0C879 139 aa9.06□□□□□ -0.96
DDX54-206ENST00000549271 C8orf88P0DMB2 117 aa9.06□□□□□ -0.96
DDX54-206ENST00000549271 TNFSF8P32971 234 aa9.06□□□□□ -0.96
DDX54-206ENST00000549271 PPP5CP53041 499 aa9.06□□□□□ -0.96
DDX54-206ENST00000549271 IZUMO4Q1ZYL8 232 aa9.06□□□□□ -0.96
DDX54-206ENST00000549271 ANKRD55Q3KP44 614 aa9.06□□□□□ -0.96
DDX54-206ENST00000549271 SLC25A24Q6NUK1 477 aa9.06□□□□□ -0.96
DDX54-206ENST00000549271 FAAP20Q6NZ36 180 aa9.06□□□□□ -0.96
DDX54-206ENST00000549271 LINC00336Q6ZUF6 198 aa9.06□□□□□ -0.96
DDX54-206ENST00000549271 H2BFWTQ7Z2G1 175 aa9.06□□□□□ -0.96
DDX54-206ENST00000549271 HSD17B13Q7Z5P4 300 aaPredicted RBP9.06□□□□□ -0.96
DDX54-206ENST00000549271 LYG2Q86SG7 212 aa9.06□□□□□ -0.96
DDX54-206ENST00000549271 WFDC3Q8IUB2 231 aa9.06□□□□□ -0.96
DDX54-206ENST00000549271 OR13C8Q8NGS7 320 aa9.06□□□□□ -0.96
DDX54-206ENST00000549271 OR5B3Q8NH48 314 aa9.06□□□□□ -0.96
DDX54-206ENST00000549271 MARCH1Q8TCQ1 289 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms