RNA–Protein interactions for RNA: ENST00000548946.1

UBE2N-202, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3

Gene UBE2N, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-202ENST00000548946 AARDQ4LEZ3 155 aa4.29□□□□□ -1.72
UBE2N-202ENST00000548946 GCSAMLQ5JQS6 135 aa4.29□□□□□ -1.72
UBE2N-202ENST00000548946 SPATA46Q5T0L3 261 aa4.29□□□□□ -1.72
UBE2N-202ENST00000548946 DCAF12Q5T6F0 453 aa4.29□□□□□ -1.72
UBE2N-202ENST00000548946 MRPL21Q7Z2W9 205 aaKnown RBP4.29□□□□□ -1.72
UBE2N-202ENST00000548946 YRDCQ86U90 279 aaKnown RBP4.29□□□□□ -1.72
UBE2N-202ENST00000548946 STPG4Q8N801 248 aa4.29□□□□□ -1.72
UBE2N-202ENST00000548946 ZNF709Q8N972 641 aa4.29□□□□□ -1.72
UBE2N-202ENST00000548946 OR5AU1Q8NGC0 362 aa4.29□□□□□ -1.72
UBE2N-202ENST00000548946 OR10P1Q8NGE3 313 aa4.29□□□□□ -1.72
UBE2N-202ENST00000548946 OR4B1Q8NGF8 309 aa4.29□□□□□ -1.72
UBE2N-202ENST00000548946 OR1L6Q8NGR2 347 aa4.29□□□□□ -1.72
UBE2N-202ENST00000548946 VN1R17PQ8TDU5 208 aa4.29□□□□□ -1.72
UBE2N-202ENST00000548946 C11orf52Q96A22 123 aa4.29□□□□□ -1.72
UBE2N-202ENST00000548946 SLC35E1Q96K37 410 aa4.29□□□□□ -1.72
UBE2N-202ENST00000548946 CIB3Q96Q77 187 aaPredicted RBP4.29□□□□□ -1.72
UBE2N-202ENST00000548946 ALKBH3Q96Q83 286 aaPredicted RBP4.29□□□□□ -1.72
UBE2N-202ENST00000548946 RNF2Q99496 336 aa4.29□□□□□ -1.72
UBE2N-202ENST00000548946 DERL1Q9BUN8 251 aa4.29□□□□□ -1.72
UBE2N-202ENST00000548946 LINC00470Q9BZP3 86 aa4.29□□□□□ -1.72
UBE2N-202ENST00000548946 AKIRIN1Q9H9L7 192 aaPredicted RBP4.29□□□□□ -1.72
UBE2N-202ENST00000548946 PATZ1Q9HBE1 687 aaKnown RBP4.29□□□□□ -1.72
UBE2N-202ENST00000548946 DNAJC4Q9NNZ3 241 aa4.29□□□□□ -1.72
UBE2N-202ENST00000548946 ASCL3Q9NQ33 180 aa4.29□□□□□ -1.72
UBE2N-202ENST00000548946 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.29□□□□□ -1.72
UBE2N-202ENST00000548946 C1RLQ9NZP8 487 aa4.29□□□□□ -1.72
UBE2N-202ENST00000548946 CLN8Q9UBY8 286 aa4.29□□□□□ -1.72
UBE2N-202ENST00000548946 RARRES3Q9UL19 164 aa4.29□□□□□ -1.72
UBE2N-202ENST00000548946 MPC1Q9Y5U8 109 aa4.29□□□□□ -1.72
UBE2N-202ENST00000548946 LY96Q9Y6Y9 160 aa4.29□□□□□ -1.72
UBE2N-202ENST00000548946 EML6Q6ZMW3 1958 aa4.29□□□□□ -1.72
UBE2N-202ENST00000548946 ARHGAP21Q5T5U3 1957 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 KIAA1549Q9HCM3 1950 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 IGKV3D-15A0A087WSY6 115 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 TRGV10A0A0A0MS01 117 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 IGHV5-10-1A0A0J9YXX1 117 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 C17orf98A8MV24 154 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 J3QT63 122 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 K7EN84 100 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 ITGB1BP1O14713 200 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 CCL25O15444 150 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 ZNHIT1O43257 154 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 ZG16O60844 167 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 HYPMO75409 117 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 S1PR2O95136 353 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 NGFP01138 241 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 OR10J4P0C629 311 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 FRMD6-AS1P0C7T7 363 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 STAG3L2P0CL84 134 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 STAG3L3P0CL85 134 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 IGLC2P0DOY2 106 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 IGLC3P0DOY3 106 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 COX6A1P12074 109 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 DEFA4P12838 97 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 CD1BP29016 333 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 G6PCP35575 357 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 OPRK1P41145 380 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 CLDN18P56856 261 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 KLF3P57682 345 aaPredicted RBP4.28□□□□□ -1.72
UBE2N-202ENST00000548946 SEC61BP60468 96 aaKnown RBP4.28□□□□□ -1.72
UBE2N-202ENST00000548946 UBE2G2P60604 165 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 ERVK11-1P61568 191 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 GNG3P63215 75 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 ZNF90Q03938 601 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 MMDQ15546 238 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 HLA-DRB5Q30154 266 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 KRTCAP3Q53RY4 240 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 TMEM136Q6ZRR5 245 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 LRP11Q86VZ4 500 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 NIT1Q86X76 327 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 BAGE3Q86Y29 109 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 BAGE2Q86Y30 109 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 ZNF645Q8N7E2 425 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 TCTEX1D1Q8N7M0 179 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 OR10D3Q8NH80 312 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 RNASE8Q8TDE3 154 aaKnown RBP4.28□□□□□ -1.72
UBE2N-202ENST00000548946 POM121L2Q96KW2 1035 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 TAAR6Q96RI8 345 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 SFXN3Q9BWM7 321 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 GNB1LQ9BYB4 327 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 WDR54Q9H977 334 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 GNB4Q9HAV0 340 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 NRN1Q9NPD7 142 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 KCNIP1Q9NZI2 227 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 UQCR10Q9UDW1 63 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 PPIAL4AQ9Y536 164 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 YTHDF2Q9Y5A9 579 aaKnown RBP4.28□□□□□ -1.72
UBE2N-202ENST00000548946 U3KQA8 63 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 V9GYV3 84 aa4.28□□□□□ -1.72
UBE2N-202ENST00000548946 CNTRLQ7Z7A1 2325 aa4.27□□□□□ -1.73
UBE2N-202ENST00000548946 TRAV38-1A0A0B4J264 116 aa4.27□□□□□ -1.73
UBE2N-202ENST00000548946 A0A1W2PQM1 296 aa4.27□□□□□ -1.73
UBE2N-202ENST00000548946 C5orf49A4QMS7 147 aa4.27□□□□□ -1.73
UBE2N-202ENST00000548946 C2CD4DB7Z1M9 353 aa4.27□□□□□ -1.73
UBE2N-202ENST00000548946 C9JCJ5 164 aa4.27□□□□□ -1.73
UBE2N-202ENST00000548946 PRSS46E5RG02 174 aa4.27□□□□□ -1.73
UBE2N-202ENST00000548946 SIRPB1O00241 398 aa4.27□□□□□ -1.73
UBE2N-202ENST00000548946 SLC17A3O00476 420 aa4.27□□□□□ -1.73
UBE2N-202ENST00000548946 CDIPTO14735 213 aa4.27□□□□□ -1.73
UBE2N-202ENST00000548946 SH2D1BO14796 132 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms