RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 ZFAND1Q8TCF1 268 aa10.54□□□□□ -0.72
PTCH1-217ENST00000548420 QTRT1Q9BXR0 403 aaKnown RBP10.54□□□□□ -0.72
PTCH1-217ENST00000548420 COMMD5Q9GZQ3 224 aa10.54□□□□□ -0.72
PTCH1-217ENST00000548420 NDUFA4L2Q9NRX3 87 aa10.54□□□□□ -0.72
PTCH1-217ENST00000548420 TMEM14BQ9NUH8 114 aa10.54□□□□□ -0.72
PTCH1-217ENST00000548420 IGLV11-55A0A075B6I3 123 aa10.53□□□□□ -0.72
PTCH1-217ENST00000548420 CCDC160A6NGH7 325 aa10.53□□□□□ -0.72
PTCH1-217ENST00000548420 H0Y980 276 aa10.53□□□□□ -0.72
PTCH1-217ENST00000548420 OR2J3O76001 311 aa10.53□□□□□ -0.72
PTCH1-217ENST00000548420 NDUFB8O95169 186 aa10.53□□□□□ -0.72
PTCH1-217ENST00000548420 CTSDP07339 412 aaPredicted RBP10.53□□□□□ -0.72
PTCH1-217ENST00000548420 AKAIN1P0CW23 69 aa10.53□□□□□ -0.72
PTCH1-217ENST00000548420 TRAPPC2P0DI81 140 aa10.53□□□□□ -0.72
PTCH1-217ENST00000548420 TRAPPC2BP0DI82 140 aa10.53□□□□□ -0.72
PTCH1-217ENST00000548420 PGAM2P15259 253 aa10.53□□□□□ -0.72
PTCH1-217ENST00000548420 SURF2Q15527 256 aaPredicted RBP10.53□□□□□ -0.72
PTCH1-217ENST00000548420 C15orf32Q32M92 178 aa10.53□□□□□ -0.72
PTCH1-217ENST00000548420 FAM209BQ5JX69 171 aa10.53□□□□□ -0.72
PTCH1-217ENST00000548420 FAAP20Q6NZ36 180 aa10.53□□□□□ -0.72
PTCH1-217ENST00000548420 IL34Q6ZMJ4 242 aa10.53□□□□□ -0.72
PTCH1-217ENST00000548420 HSD17B13Q7Z5P4 300 aaPredicted RBP10.53□□□□□ -0.72
PTCH1-217ENST00000548420 CCDC190Q86UF4 302 aa10.53□□□□□ -0.72
PTCH1-217ENST00000548420 MAPKAPK5-AS1Q8N8E1 139 aa10.53□□□□□ -0.72
PTCH1-217ENST00000548420 OR10W1Q8NGF6 305 aa10.53□□□□□ -0.72
PTCH1-217ENST00000548420 OR13C8Q8NGS7 320 aa10.53□□□□□ -0.72
PTCH1-217ENST00000548420 MARCH1Q8TCQ1 289 aa10.53□□□□□ -0.72
PTCH1-217ENST00000548420 TP53RKQ96S44 253 aa10.53□□□□□ -0.72
PTCH1-217ENST00000548420 TSC22D3Q99576 134 aa10.53□□□□□ -0.72
PTCH1-217ENST00000548420 RTBDNQ9BSG5 229 aaPredicted RBP10.53□□□□□ -0.72
PTCH1-217ENST00000548420 SLC2A8Q9NY64 477 aa10.53□□□□□ -0.72
PTCH1-217ENST00000548420 FKBP11Q9NYL4 201 aa10.53□□□□□ -0.72
PTCH1-217ENST00000548420 PRNDQ9UKY0 176 aa10.53□□□□□ -0.72
PTCH1-217ENST00000548420 V9GYH0 126 aa10.53□□□□□ -0.72
PTCH1-217ENST00000548420 DPPA5A6NC42 116 aa10.52□□□□□ -0.73
PTCH1-217ENST00000548420 DBX1A6NMT0 343 aa10.52□□□□□ -0.73
PTCH1-217ENST00000548420 DISC1C4P0D8 188 aa10.52□□□□□ -0.73
PTCH1-217ENST00000548420 BMPR1BO00238 502 aa10.52□□□□□ -0.73
PTCH1-217ENST00000548420 SNAPC5O75971 98 aa10.52□□□□□ -0.73
PTCH1-217ENST00000548420 DHFRP00374 187 aa10.52□□□□□ -0.73
PTCH1-217ENST00000548420 P0C879 139 aa10.52□□□□□ -0.73
PTCH1-217ENST00000548420 HIST1H1BP16401 226 aaKnown RBP10.52□□□□□ -0.73
PTCH1-217ENST00000548420 PPP5CP53041 499 aa10.52□□□□□ -0.73
PTCH1-217ENST00000548420 WT1-ASQ06250 92 aa10.52□□□□□ -0.73
PTCH1-217ENST00000548420 EXOSC2Q13868 293 aaKnown RBP10.52□□□□□ -0.73
PTCH1-217ENST00000548420 SCGB2B2Q4G0G5 96 aa10.52□□□□□ -0.73
PTCH1-217ENST00000548420 OR5B3Q8NH48 314 aa10.52□□□□□ -0.73
PTCH1-217ENST00000548420 THAP7Q9BT49 309 aaPredicted RBP10.52□□□□□ -0.73
PTCH1-217ENST00000548420 FBXL7Q9UJT9 491 aa10.52□□□□□ -0.73
PTCH1-217ENST00000548420 GPR132Q9UNW8 380 aa10.52□□□□□ -0.73
PTCH1-217ENST00000548420 NSG2Q9Y328 171 aa10.52□□□□□ -0.73
PTCH1-217ENST00000548420 OR51B2Q9Y5P1 312 aa10.52□□□□□ -0.73
PTCH1-217ENST00000548420 C3orf85A0A1B0GTC6 90 aa10.51□□□□□ -0.73
PTCH1-217ENST00000548420 C15orf61A6NNL5 157 aa10.51□□□□□ -0.73
PTCH1-217ENST00000548420 B3GALNT1O75752 331 aa10.51□□□□□ -0.73
PTCH1-217ENST00000548420 REG1AP05451 166 aa10.51□□□□□ -0.73
PTCH1-217ENST00000548420 SERPINE2P07093 398 aa10.51□□□□□ -0.73
PTCH1-217ENST00000548420 UCP1P25874 307 aa10.51□□□□□ -0.73
PTCH1-217ENST00000548420 ETV6P41212 452 aa10.51□□□□□ -0.73
PTCH1-217ENST00000548420 ZNF79Q15937 498 aa10.51□□□□□ -0.73
PTCH1-217ENST00000548420 GDPD1Q8N9F7 314 aa10.51□□□□□ -0.73
PTCH1-217ENST00000548420 OR51S1Q8NGJ8 323 aa10.51□□□□□ -0.73
PTCH1-217ENST00000548420 TRIM63Q969Q1 353 aa10.51□□□□□ -0.73
PTCH1-217ENST00000548420 PRRT1Q99946 306 aa10.51□□□□□ -0.73
PTCH1-217ENST00000548420 C5orf66Q9H5L9 145 aa10.51□□□□□ -0.73
PTCH1-217ENST00000548420 SIGLEC8Q9NYZ4 499 aa10.51□□□□□ -0.73
PTCH1-217ENST00000548420 LRP1BQ9NZR2 4599 aa10.51□□□□□ -0.73
PTCH1-217ENST00000548420 IGKV1-5P01602 117 aa10.5□□□□□ -0.73
PTCH1-217ENST00000548420 SYNJ2BPP57105 145 aa10.5□□□□□ -0.73
PTCH1-217ENST00000548420 H2BFWTQ7Z2G1 175 aa10.5□□□□□ -0.73
PTCH1-217ENST00000548420 CCDC71LQ8N9Z2 235 aa10.5□□□□□ -0.73
PTCH1-217ENST00000548420 OR9G4Q8NGQ1 327 aa10.5□□□□□ -0.73
PTCH1-217ENST00000548420 CCDC140Q96MF4 163 aa10.5□□□□□ -0.73
PTCH1-217ENST00000548420 ELOVL1Q9BW60 279 aa10.5□□□□□ -0.73
PTCH1-217ENST00000548420 COPZ2Q9P299 210 aa10.5□□□□□ -0.73
PTCH1-217ENST00000548420 TRBV7-1A0A0A6YYK4 115 aa10.49□□□□□ -0.73
PTCH1-217ENST00000548420 CDS2O95674 445 aa10.49□□□□□ -0.73
PTCH1-217ENST00000548420 IGLV1-51P01701 117 aa10.49□□□□□ -0.73
PTCH1-217ENST00000548420 OR13C7P0DN81 318 aa10.49□□□□□ -0.73
PTCH1-217ENST00000548420 DEFA4P12838 97 aa10.49□□□□□ -0.73
PTCH1-217ENST00000548420 S100A5P33763 92 aa10.49□□□□□ -0.73
PTCH1-217ENST00000548420 MECP2P51608 486 aaKnown RBP10.49□□□□□ -0.73
PTCH1-217ENST00000548420 MFAP2P55001 183 aa10.49□□□□□ -0.73
PTCH1-217ENST00000548420 KLF9Q13886 244 aaPredicted RBP10.49□□□□□ -0.73
PTCH1-217ENST00000548420 TATDN3Q17R31 274 aa10.49□□□□□ -0.73
PTCH1-217ENST00000548420 RPEL1Q2QD12 228 aa10.49□□□□□ -0.73
PTCH1-217ENST00000548420 SP6Q3SY56 376 aa10.49□□□□□ -0.73
PTCH1-217ENST00000548420 GLYATL2Q8WU03 294 aa10.49□□□□□ -0.73
PTCH1-217ENST00000548420 LSM10Q969L4 123 aaKnown RBP10.49□□□□□ -0.73
PTCH1-217ENST00000548420 OR4C12Q96R67 309 aa10.49□□□□□ -0.73
PTCH1-217ENST00000548420 TUBA4BQ9H853 241 aa10.49□□□□□ -0.73
PTCH1-217ENST00000548420 NDUFA13Q9P0J0 144 aa10.49□□□□□ -0.73
PTCH1-217ENST00000548420 F11RQ9Y624 299 aaKnown RBP10.49□□□□□ -0.73
PTCH1-217ENST00000548420 A0A0B4J293 547 aa10.48□□□□□ -0.73
PTCH1-217ENST00000548420 TEX13DA0A0J9YY54 714 aaPredicted RBP10.48□□□□□ -0.73
PTCH1-217ENST00000548420 CRYM-AS1A6NIL9 109 aa10.48□□□□□ -0.73
PTCH1-217ENST00000548420 CSN3P07498 182 aa10.48□□□□□ -0.73
PTCH1-217ENST00000548420 HSPE1P61604 102 aaKnown RBP10.48□□□□□ -0.73
PTCH1-217ENST00000548420 PYDC2Q56P42 97 aa10.48□□□□□ -0.73
PTCH1-217ENST00000548420 GPHB5Q86YW7 130 aa10.48□□□□□ -0.73
PTCH1-217ENST00000548420 Q8N402 240 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms