RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 OR5AS1Q8N127 324 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 CLDN22Q8N7P3 220 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 OR8G5Q8NG78 346 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 OR10Z1Q8NGY1 313 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 ZNF420Q8TAQ5 688 aaPredicted RBP2.31□□□□□ -2.04
PTCH1-216ENST00000548379 RASSF5Q8WWW0 418 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 DEDD2Q8WXF8 326 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 LZICQ8WZA0 190 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 RORBQ92753 470 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 MAL2Q969L2 176 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 ADTRPQ96IZ2 230 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 PAIP2Q9BPZ3 127 aaKnown RBP2.31□□□□□ -2.04
PTCH1-216ENST00000548379 ZNF251Q9BRH9 671 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 OR2H1Q9GZK4 316 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 SLC22A4Q9H015 551 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 TOLLIPQ9H0E2 274 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 TMBIM4Q9HC24 238 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 TMEM100Q9NV29 134 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 TAS2R5Q9NYW4 299 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 VPREB3Q9UKI3 123 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 POLR1DQ9Y2S0 133 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 SOX21Q9Y651 276 aaPredicted RBP2.31□□□□□ -2.04
PTCH1-216ENST00000548379 CNTRLQ7Z7A1 2325 aa2.31□□□□□ -2.04
PTCH1-216ENST00000548379 IGHV7-4-1A0A0J9YVY3 117 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 OR6C6A6NF89 314 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 FABP12A6NFH5 140 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 LRRN3E7EW58 273 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 M0QXV9 152 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 UBDO15205 165 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 IFNA14P01570 189 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 ASAH2BP0C7U1 165 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 ZNF688P0C7X2 276 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 OCMP0CE72 109 aaPredicted RBP2.3□□□□□ -2.04
PTCH1-216ENST00000548379 RD3LP0DJH9 198 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 MYL9P24844 172 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 GALR1P47211 349 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 POLR2JP52435 117 aaKnown RBP2.3□□□□□ -2.04
PTCH1-216ENST00000548379 TAS2R41P59536 307 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 ARF6P62330 175 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 CACNG7P62955 275 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 SLC35A2P78381 396 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 RPL18Q07020 188 aaKnown RBP2.3□□□□□ -2.04
PTCH1-216ENST00000548379 OR8G1Q15617 311 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 HIST3H3Q16695 136 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 OR2T2Q6IF00 324 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 ZFP1Q6P2D0 407 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 DNM1P34Q6PK57 102 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 EPGNQ6UW88 154 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 PLEKHG7Q6ZR37 379 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 SLC36A1Q7Z2H8 476 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 VMO1Q7Z5L0 202 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 PDZD9Q8IXQ8 264 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 BOD1L2Q8IYS8 172 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 ZNF738Q8NE65 137 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 C19orf18Q8NEA5 215 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 APOBEC3DQ96AK3 386 aaPredicted RBP2.3□□□□□ -2.04
PTCH1-216ENST00000548379 RBMXL1Q96E39 390 aaKnown RBP2.3□□□□□ -2.04
PTCH1-216ENST00000548379 TEX37Q96LM6 180 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 FAM19A4Q96LR4 140 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 C18orf15Q96N68 181 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 TEAD3Q99594 435 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 PDCD1LG2Q9BQ51 273 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 C20orf144Q9BQM9 153 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 C7orf50Q9BRJ6 194 aaKnown RBP2.3□□□□□ -2.04
PTCH1-216ENST00000548379 TMEM243Q9BU79 118 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 ARV1Q9H2C2 271 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 TXNIPQ9H3M7 391 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 WDR55Q9H6Y2 383 aaPredicted RBP2.3□□□□□ -2.04
PTCH1-216ENST00000548379 ACOT13Q9NPJ3 140 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 NKIRAS1Q9NYS0 192 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 AP3M1Q9Y2T2 418 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 MED31Q9Y3C7 131 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 SCN3AQ9NY46 2000 aa2.3□□□□□ -2.04
PTCH1-216ENST00000548379 SVEP1Q4LDE5 3571 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 CCDC88CQ9P219 2028 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 IQCF6A8MYZ5 107 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 F5H5P2 479 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 LINC01619G3V211 115 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 NPFFO15130 113 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 NDUFB3O43676 98 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 TPST1O60507 370 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 CRTAPO75718 401 aaPredicted RBP2.29□□□□□ -2.04
PTCH1-216ENST00000548379 UPK1BO75841 260 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 TNFAIP8O95379 198 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 IGF2P01344 180 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 IGHV3-11P01762 117 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 C1QCP02747 245 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 OPN1SWP03999 348 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 HLA-GP17693 338 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 NPY1RP25929 384 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 GGT2P36268 569 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 CD200P41217 278 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 FMODQ06828 376 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 RBMY1FQ15415 496 aaKnown RBP2.29□□□□□ -2.04
PTCH1-216ENST00000548379 BSXQ3C1V8 233 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 SPRNQ5BIV9 151 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 RBM48Q5RL73 367 aaKnown RBP2.29□□□□□ -2.04
PTCH1-216ENST00000548379 ZNF880Q6PDB4 577 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 CROCCP2Q86T23 111 aa2.29□□□□□ -2.04
PTCH1-216ENST00000548379 CALHM3Q86XJ0 350 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms