RNA–Protein interactions for RNA: ENST00000548140.1

HECTD4-206, Transcript of HECT domain E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HECTD4, Length 1,426 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HECTD4-206ENST00000548140 TMEM50AO95807 157 aa12.79□□□□□ -0.36
HECTD4-206ENST00000548140 IFNA10P01566 189 aa12.79□□□□□ -0.36
HECTD4-206ENST00000548140 DEFA4P12838 97 aa12.79□□□□□ -0.36
HECTD4-206ENST00000548140 CTRB1P17538 263 aa12.79□□□□□ -0.36
HECTD4-206ENST00000548140 PAX9P55771 341 aa12.79□□□□□ -0.36
HECTD4-206ENST00000548140 RIPPLY3P57055 190 aa12.79□□□□□ -0.36
HECTD4-206ENST00000548140 RPL23AP62750 156 aaKnown RBP12.79□□□□□ -0.36
HECTD4-206ENST00000548140 C19orf54Q5BKX5 351 aa12.79□□□□□ -0.36
HECTD4-206ENST00000548140 SPANXN5Q5MJ07 72 aa12.79□□□□□ -0.36
HECTD4-206ENST00000548140 CTRB2Q6GPI1 263 aa12.79□□□□□ -0.36
HECTD4-206ENST00000548140 PRSS54Q6PEW0 395 aa12.79□□□□□ -0.36
HECTD4-206ENST00000548140 OR4F5Q8NH21 305 aa12.79□□□□□ -0.36
HECTD4-206ENST00000548140 LINC01006Q8NI28 216 aa12.79□□□□□ -0.36
HECTD4-206ENST00000548140 FAM110DQ8TAY7 271 aaPredicted RBP12.79□□□□□ -0.36
HECTD4-206ENST00000548140 SMIM8Q96KF7 97 aa12.79□□□□□ -0.36
HECTD4-206ENST00000548140 RNF126Q9BV68 326 aa12.79□□□□□ -0.36
HECTD4-206ENST00000548140 GON7Q9BXV9 100 aa12.79□□□□□ -0.36
HECTD4-206ENST00000548140 WNT10AQ9GZT5 417 aa12.79□□□□□ -0.36
HECTD4-206ENST00000548140 C11orf1Q9H5F2 150 aa12.79□□□□□ -0.36
HECTD4-206ENST00000548140 PAIP2BQ9ULR5 123 aaKnown RBP12.79□□□□□ -0.36
HECTD4-206ENST00000548140 U3KQ87 197 aa12.79□□□□□ -0.36
HECTD4-206ENST00000548140 E5RGE8 158 aa12.79□□□□□ -0.36
HECTD4-206ENST00000548140 FBXO24O75426 580 aa12.79□□□□□ -0.36
HECTD4-206ENST00000548140 CRYGCP07315 174 aa12.79□□□□□ -0.36
HECTD4-206ENST00000548140 RNASE2P10153 161 aaKnown RBP12.79□□□□□ -0.36
HECTD4-206ENST00000548140 PPIFP30405 207 aaKnown RBP12.79□□□□□ -0.36
HECTD4-206ENST00000548140 HTR2BP41595 481 aa12.79□□□□□ -0.36
HECTD4-206ENST00000548140 TAS2R30P59541 319 aa12.79□□□□□ -0.36
HECTD4-206ENST00000548140 RPP30P78346 268 aaKnown RBP12.79□□□□□ -0.36
HECTD4-206ENST00000548140 CENPVQ7Z7K6 275 aaPredicted RBP12.79□□□□□ -0.36
HECTD4-206ENST00000548140 PRIMA1Q86XR5 153 aa12.79□□□□□ -0.36
HECTD4-206ENST00000548140 SLC24A4Q8NFF2 622 aa12.79□□□□□ -0.36
HECTD4-206ENST00000548140 P2RX4Q99571 388 aa12.79□□□□□ -0.36
HECTD4-206ENST00000548140 ZNF355PQ9NSJ1 428 aa12.79□□□□□ -0.36
HECTD4-206ENST00000548140 MBD2Q9UBB5 411 aa12.79□□□□□ -0.36
HECTD4-206ENST00000548140 PRH1P02810 166 aa12.78□□□□□ -0.36
HECTD4-206ENST00000548140 HKR1P10072 659 aa12.78□□□□□ -0.36
HECTD4-206ENST00000548140 NPY1RP25929 384 aa12.78□□□□□ -0.36
HECTD4-206ENST00000548140 CAV2P51636 162 aa12.78□□□□□ -0.36
HECTD4-206ENST00000548140 SUB1P53999 127 aaKnown RBP eCLIP12.78□□□□□ -0.36
HECTD4-206ENST00000548140 SLC35B1P78383 322 aa12.78□□□□□ -0.36
HECTD4-206ENST00000548140 ZNF329Q86UD4 541 aa12.78□□□□□ -0.36
HECTD4-206ENST00000548140 TCTE3Q8IZS6 198 aa12.78□□□□□ -0.36
HECTD4-206ENST00000548140 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.78□□□□□ -0.36
HECTD4-206ENST00000548140 NEURL2Q9BR09 285 aa12.78□□□□□ -0.36
HECTD4-206ENST00000548140 STRAPQ9Y3F4 350 aaKnown RBP12.78□□□□□ -0.36
HECTD4-206ENST00000548140 F11RQ9Y624 299 aaKnown RBP12.78□□□□□ -0.36
HECTD4-206ENST00000548140 PSMB11A5LHX3 300 aa12.77□□□□□ -0.37
HECTD4-206ENST00000548140 SOX15O60248 233 aa12.77□□□□□ -0.37
HECTD4-206ENST00000548140 PFDN1O60925 122 aa12.77□□□□□ -0.37
HECTD4-206ENST00000548140 TSC22D2O75157 780 aa12.77□□□□□ -0.37
HECTD4-206ENST00000548140 CFHR3Q02985 330 aa12.77□□□□□ -0.37
HECTD4-206ENST00000548140 CD300CQ08708 224 aa12.77□□□□□ -0.37
HECTD4-206ENST00000548140 BSXQ3C1V8 233 aa12.77□□□□□ -0.37
HECTD4-206ENST00000548140 C2orf83Q53S99 150 aa12.77□□□□□ -0.37
HECTD4-206ENST00000548140 SLC25A24Q6NUK1 477 aa12.77□□□□□ -0.37
HECTD4-206ENST00000548140 ZNF114Q8NC26 417 aa12.77□□□□□ -0.37
HECTD4-206ENST00000548140 OR1P1Q8NH06 330 aa12.77□□□□□ -0.37
HECTD4-206ENST00000548140 DCUN1D4Q92564 292 aa12.77□□□□□ -0.37
HECTD4-206ENST00000548140 OR4C12Q96R67 309 aa12.77□□□□□ -0.37
HECTD4-206ENST00000548140 FXYD6-FXYD2A0A087WZ82 144 aa12.76□□□□□ -0.37
HECTD4-206ENST00000548140 FAM24AA6NFZ4 105 aa12.76□□□□□ -0.37
HECTD4-206ENST00000548140 C15orf62A8K5M9 175 aa12.76□□□□□ -0.37
HECTD4-206ENST00000548140 G3V3Q6 166 aa12.76□□□□□ -0.37
HECTD4-206ENST00000548140 OR8U8P0C7N1 319 aa12.76□□□□□ -0.37
HECTD4-206ENST00000548140 SLC25A4P12235 298 aa12.76□□□□□ -0.37
HECTD4-206ENST00000548140 LYL1P12980 280 aa12.76□□□□□ -0.37
HECTD4-206ENST00000548140 MDKP21741 143 aaPredicted RBP12.76□□□□□ -0.37
HECTD4-206ENST00000548140 P2RY1P47900 373 aa12.76□□□□□ -0.37
HECTD4-206ENST00000548140 RAB11AP62491 216 aa12.76□□□□□ -0.37
HECTD4-206ENST00000548140 C10orf99Q6UWK7 81 aa12.76□□□□□ -0.37
HECTD4-206ENST00000548140 NOXA1Q86UR1 476 aa12.76□□□□□ -0.37
HECTD4-206ENST00000548140 OR1L6Q8NGR2 347 aa12.76□□□□□ -0.37
HECTD4-206ENST00000548140 MS4A10Q96PG2 267 aa12.76□□□□□ -0.37
HECTD4-206ENST00000548140 LYRM2Q9NU23 88 aaPredicted RBP12.76□□□□□ -0.37
HECTD4-206ENST00000548140 RNF114Q9Y508 228 aa12.76□□□□□ -0.37
HECTD4-206ENST00000548140 NF1P21359 2839 aa12.76□□□□□ -0.37
HECTD4-206ENST00000548140 CLPSL1A2RUU4 121 aa12.75□□□□□ -0.37
HECTD4-206ENST00000548140 HAX1O00165 279 aa12.75□□□□□ -0.37
HECTD4-206ENST00000548140 CYB5BO43169 146 aa12.75□□□□□ -0.37
HECTD4-206ENST00000548140 IFNA4P05014 189 aa12.75□□□□□ -0.37
HECTD4-206ENST00000548140 PF4V1P10720 104 aa12.75□□□□□ -0.37
HECTD4-206ENST00000548140 MFAP2P55001 183 aa12.75□□□□□ -0.37
HECTD4-206ENST00000548140 ATP5IP56385 69 aaPredicted RBP12.75□□□□□ -0.37
HECTD4-206ENST00000548140 KLHDC1Q8N7A1 406 aa12.75□□□□□ -0.37
HECTD4-206ENST00000548140 TMEM170AQ8WVE7 144 aa12.75□□□□□ -0.37
HECTD4-206ENST00000548140 DMRT1Q9Y5R6 373 aa12.75□□□□□ -0.37
HECTD4-206ENST00000548140 IGLV1-40P01703 118 aa12.74□□□□□ -0.37
HECTD4-206ENST00000548140 IGHG4P01861 327 aa12.74□□□□□ -0.37
HECTD4-206ENST00000548140 METTL15P1P0C7V9 234 aa12.74□□□□□ -0.37
HECTD4-206ENST00000548140 HIST1H1BP16401 226 aaKnown RBP12.74□□□□□ -0.37
HECTD4-206ENST00000548140 TEX38Q6PEX7 206 aa12.74□□□□□ -0.37
HECTD4-206ENST00000548140 TMEM65Q6PI78 240 aa12.74□□□□□ -0.37
HECTD4-206ENST00000548140 TMEM14EPQ6UXP3 125 aa12.74□□□□□ -0.37
HECTD4-206ENST00000548140 ETV3LQ6ZN32 361 aa12.74□□□□□ -0.37
HECTD4-206ENST00000548140 ZNF546Q86UE3 836 aa12.74□□□□□ -0.37
HECTD4-206ENST00000548140 MISP3Q96FF7 219 aa12.74□□□□□ -0.37
HECTD4-206ENST00000548140 FANCD2OSQ96PS1 177 aa12.74□□□□□ -0.37
HECTD4-206ENST00000548140 IGLV11-55A0A075B6I3 123 aa12.73□□□□□ -0.37
HECTD4-206ENST00000548140 H3BUA1 57 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms