RNA–Protein interactions for RNA: ENST00000547861.5

CCDC65-203, Transcript of coiled-coil domain containing 65, humanhuman

TSL 2

Gene CCDC65, Length 1,746 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-203ENST00000547861 NEU4Q8WWR8 484 aaPredicted RBP6.55□□□□□ -1.36
CCDC65-203ENST00000547861 TMEM186Q96B77 213 aa6.55□□□□□ -1.36
CCDC65-203ENST00000547861 NEIL1Q96FI4 390 aaPredicted RBP6.55□□□□□ -1.36
CCDC65-203ENST00000547861 RCC1LQ96I51 464 aaKnown RBP6.55□□□□□ -1.36
CCDC65-203ENST00000547861 EIF5A2Q9GZV4 153 aaKnown RBP6.55□□□□□ -1.36
CCDC65-203ENST00000547861 HIPK2Q9H2X6 1198 aa6.55□□□□□ -1.36
CCDC65-203ENST00000547861 BET1LQ9NYM9 111 aa6.55□□□□□ -1.36
CCDC65-203ENST00000547861 PRNDQ9UKY0 176 aa6.55□□□□□ -1.36
CCDC65-203ENST00000547861 OR51B2Q9Y5P1 312 aa6.55□□□□□ -1.36
CCDC65-203ENST00000547861 KPTNQ9Y664 436 aa6.55□□□□□ -1.36
CCDC65-203ENST00000547861 COL6A5A8TX70 2615 aa6.55□□□□□ -1.36
CCDC65-203ENST00000547861 ATRQ13535 2644 aa6.55□□□□□ -1.36
CCDC65-203ENST00000547861 IGHV2-26A0A0B4J1V2 119 aa6.54□□□□□ -1.36
CCDC65-203ENST00000547861 TRAV1-1A0A0B4J248 108 aa6.54□□□□□ -1.36
CCDC65-203ENST00000547861 KBTBD11O94819 623 aa6.54□□□□□ -1.36
CCDC65-203ENST00000547861 LY6G6DO95868 133 aa6.54□□□□□ -1.36
CCDC65-203ENST00000547861 IGKV1D-33P01593 117 aa6.54□□□□□ -1.36
CCDC65-203ENST00000547861 IGKV1-33P01594 117 aa6.54□□□□□ -1.36
CCDC65-203ENST00000547861 RBP4P02753 201 aa6.54□□□□□ -1.36
CCDC65-203ENST00000547861 IL3RAP26951 378 aa6.54□□□□□ -1.36
CCDC65-203ENST00000547861 HSPE1P61604 102 aaKnown RBP6.54□□□□□ -1.36
CCDC65-203ENST00000547861 PRCDQ00LT1 54 aa6.54□□□□□ -1.36
CCDC65-203ENST00000547861 HNF4GQ14541 408 aa6.54□□□□□ -1.36
CCDC65-203ENST00000547861 Q5PR19 223 aa6.54□□□□□ -1.36
CCDC65-203ENST00000547861 ETV3LQ6ZN32 361 aa6.54□□□□□ -1.36
CCDC65-203ENST00000547861 PDPNQ86YL7 162 aa6.54□□□□□ -1.36
CCDC65-203ENST00000547861 ABHD12Q8N2K0 398 aa6.54□□□□□ -1.36
CCDC65-203ENST00000547861 SFT2D1Q8WV19 159 aa6.54□□□□□ -1.36
CCDC65-203ENST00000547861 TIMD4Q96H15 378 aa6.54□□□□□ -1.36
CCDC65-203ENST00000547861 KRTAP4-12Q9BQ66 201 aa6.54□□□□□ -1.36
CCDC65-203ENST00000547861 NPCDR1Q9BY65 106 aa6.54□□□□□ -1.36
CCDC65-203ENST00000547861 UBTD1Q9HAC8 227 aa6.54□□□□□ -1.36
CCDC65-203ENST00000547861 MIOXQ9UGB7 285 aa6.54□□□□□ -1.36
CCDC65-203ENST00000547861 ZNF257Q9Y2Q1 563 aa6.54□□□□□ -1.36
CCDC65-203ENST00000547861 SONP18583 2426 aaKnown RBP6.54□□□□□ -1.36
CCDC65-203ENST00000547861 PPIAL4CA0A0B4J2A2 164 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 RBFOX3A6NFN3 312 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 C22orf46C9J442 243 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 NUPL2O15504 423 aaKnown RBP6.53□□□□□ -1.36
CCDC65-203ENST00000547861 SLC25A17O43808 307 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 PPIAL4GP0DN37 164 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 NPY1RP25929 384 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 DLK1P80370 383 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 PRB3Q04118 309 aaPredicted RBP6.53□□□□□ -1.36
CCDC65-203ENST00000547861 ICAM4Q14773 271 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 HAGHQ16775 308 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 HLA-DRB5Q30154 266 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 ZNF506Q5JVG8 444 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 FFAR4Q5NUL3 377 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 TGIF2LXQ8IUE1 241 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 CIARTQ8N365 385 aaPredicted RBP6.53□□□□□ -1.36
CCDC65-203ENST00000547861 Q8N7P7 452 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 CLDND2Q8NHS1 167 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 MBD3L1Q8WWY6 194 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 RAB1CQ92928 201 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 TNFRSF14Q92956 283 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 Q96MF0 132 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 ATP6V0BQ99437 205 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 RARRES2Q99969 163 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 PCGF1Q9BSM1 259 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 HINT2Q9BX68 163 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 ENY2Q9NPA8 101 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 WDR83OSQ9Y284 106 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 WASHC3Q9Y3C0 194 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 LOC102723971A0A1B0GUV8 181 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 SCO2A0A1W2PP80 73 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 A0A1W2PPH5 198 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 SMCO3A2RU48 225 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 XKRY2A2RUG3 117 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 MAP1LC3B2A6NCE7 125 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 SMAD7O15105 426 aaKnown RBP6.53□□□□□ -1.36
CCDC65-203ENST00000547861 CA2P00918 260 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 IGLV1-47P01700 117 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 IGLV2-23P01705 113 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 CD33P20138 364 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 COX7A1P24310 79 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 CD1BP29016 333 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 CDKN1AP38936 164 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 RAB13P51153 203 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 FGF8P55075 233 aaPredicted RBP6.53□□□□□ -1.36
CCDC65-203ENST00000547861 RAB11AP62491 216 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 LCN15Q6UWW0 184 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 LRRC75A-AS1Q8N1F1 130 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 LY6G5BQ8NDX9 201 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 FLYWCH2Q96CP2 140 aaKnown RBP6.53□□□□□ -1.36
CCDC65-203ENST00000547861 PERPQ96FX8 193 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 GGACTQ9BVM4 153 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 CLEC7AQ9BXN2 247 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 MAP1LC3BQ9GZQ8 125 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 SLC35B3Q9H1N7 401 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 SLC25A22Q9H936 323 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 CHODLQ9H9P2 273 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 PLEKHA3Q9HB20 300 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 ONECUT1Q9UBC0 465 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 FBN3Q75N90 2809 aa6.53□□□□□ -1.36
CCDC65-203ENST00000547861 TEX50A0A1B0GTY4 177 aa6.52□□□□□ -1.37
CCDC65-203ENST00000547861 C17orf112F2Z3M2 114 aa6.52□□□□□ -1.37
CCDC65-203ENST00000547861 EIF3GO75821 320 aaKnown RBP eCLIP6.52□□□□□ -1.37
CCDC65-203ENST00000547861 IFNA4P05014 189 aa6.52□□□□□ -1.37
CCDC65-203ENST00000547861 LIPFP07098 398 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms