RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 SEC22AQ96IW7 307 aa9.94□□□□□ -0.82
CPSF6-204ENST00000547486 CMTM3Q96MX0 182 aa9.94□□□□□ -0.82
CPSF6-204ENST00000547486 OVOL2Q9BRP0 275 aa9.94□□□□□ -0.82
CPSF6-204ENST00000547486 GGTLC1Q9BX51 225 aa9.94□□□□□ -0.82
CPSF6-204ENST00000547486 LOC102724200A0A096LPH7 203 aaPredicted RBP9.93□□□□□ -0.82
CPSF6-204ENST00000547486 SMIM31A0A1B0GVY4 71 aa9.93□□□□□ -0.82
CPSF6-204ENST00000547486 M0QYG6 137 aa9.93□□□□□ -0.82
CPSF6-204ENST00000547486 NDUFA4O00483 81 aa9.93□□□□□ -0.82
CPSF6-204ENST00000547486 CYB5BO43169 146 aa9.93□□□□□ -0.82
CPSF6-204ENST00000547486 CTSGP08311 255 aa9.93□□□□□ -0.82
CPSF6-204ENST00000547486 ANKRD55Q3KP44 614 aa9.93□□□□□ -0.82
CPSF6-204ENST00000547486 LPCAT3Q6P1A2 487 aa9.93□□□□□ -0.82
CPSF6-204ENST00000547486 SPSB3Q6PJ21 355 aa9.93□□□□□ -0.82
CPSF6-204ENST00000547486 UBAC2Q8NBM4 344 aa9.93□□□□□ -0.82
CPSF6-204ENST00000547486 OR5B3Q8NH48 314 aa9.93□□□□□ -0.82
CPSF6-204ENST00000547486 SCPEP1Q9HB40 452 aa9.93□□□□□ -0.82
CPSF6-204ENST00000547486 UBQLN2Q9UHD9 624 aa9.93□□□□□ -0.82
CPSF6-204ENST00000547486 DNAH1Q9P2D7 4330 aa9.93□□□□□ -0.82
CPSF6-204ENST00000547486 C15orf61A6NNL5 157 aa9.92□□□□□ -0.82
CPSF6-204ENST00000547486 I3L2K1 104 aa9.92□□□□□ -0.82
CPSF6-204ENST00000547486 TSPAN4O14817 238 aa9.92□□□□□ -0.82
CPSF6-204ENST00000547486 RCVRNP35243 200 aa9.92□□□□□ -0.82
CPSF6-204ENST00000547486 UCP3P55916 312 aa9.92□□□□□ -0.82
CPSF6-204ENST00000547486 IZUMO4Q1ZYL8 232 aa9.92□□□□□ -0.82
CPSF6-204ENST00000547486 OR1P1Q8NH06 330 aa9.92□□□□□ -0.82
CPSF6-204ENST00000547486 TMEM56Q96MV1 263 aa9.92□□□□□ -0.82
CPSF6-204ENST00000547486 ATP6V0BQ99437 205 aa9.92□□□□□ -0.82
CPSF6-204ENST00000547486 SPAG8Q99932 426 aaPredicted RBP9.92□□□□□ -0.82
CPSF6-204ENST00000547486 C20orf24Q9BUV8 137 aa9.92□□□□□ -0.82
CPSF6-204ENST00000547486 NAA50Q9GZZ1 169 aaKnown RBP9.92□□□□□ -0.82
CPSF6-204ENST00000547486 DAZ1Q9NQZ3 744 aaKnown RBP9.92□□□□□ -0.82
CPSF6-204ENST00000547486 FAM212BQ9NTI7 297 aaPredicted RBP9.92□□□□□ -0.82
CPSF6-204ENST00000547486 FKBP11Q9NYL4 201 aa9.92□□□□□ -0.82
CPSF6-204ENST00000547486 KLK11Q9UBX7 282 aa9.92□□□□□ -0.82
CPSF6-204ENST00000547486 K7EMT4 169 aa9.91□□□□□ -0.82
CPSF6-204ENST00000547486 IGHV3-48P01763 117 aa9.91□□□□□ -0.82
CPSF6-204ENST00000547486 PI3P19957 117 aa9.91□□□□□ -0.82
CPSF6-204ENST00000547486 RORCP51449 518 aa9.91□□□□□ -0.82
CPSF6-204ENST00000547486 CTF1Q16619 201 aa9.91□□□□□ -0.82
CPSF6-204ENST00000547486 Q56UQ5 140 aa9.91□□□□□ -0.82
CPSF6-204ENST00000547486 RNASE12Q5GAN4 147 aaKnown RBP9.91□□□□□ -0.82
CPSF6-204ENST00000547486 H2BFWTQ7Z2G1 175 aa9.91□□□□□ -0.82
CPSF6-204ENST00000547486 SLC38A6Q8IZM9 456 aa9.91□□□□□ -0.82
CPSF6-204ENST00000547486 OR4A16Q8NH70 328 aa9.91□□□□□ -0.82
CPSF6-204ENST00000547486 IL17DQ8TAD2 202 aa9.91□□□□□ -0.82
CPSF6-204ENST00000547486 MRGPRFQ96AM1 343 aa9.91□□□□□ -0.82
CPSF6-204ENST00000547486 TSC22D3Q99576 134 aa9.91□□□□□ -0.82
CPSF6-204ENST00000547486 C15orf62A8K5M9 175 aa9.9□□□□□ -0.82
CPSF6-204ENST00000547486 HSPE1P61604 102 aaKnown RBP9.9□□□□□ -0.82
CPSF6-204ENST00000547486 PLECQ15149 4684 aaKnown RBP9.9□□□□□ -0.82
CPSF6-204ENST00000547486 ODF3L2Q3SX64 289 aa9.9□□□□□ -0.82
CPSF6-204ENST00000547486 MISP3Q96FF7 219 aa9.9□□□□□ -0.82
CPSF6-204ENST00000547486 SMPXQ9UHP9 88 aa9.9□□□□□ -0.82
CPSF6-204ENST00000547486 BIRC6Q9NR09 4857 aa9.9□□□□□ -0.82
CPSF6-204ENST00000547486 IGHV3-49A0A0A0MS15 119 aa9.89□□□□□ -0.83
CPSF6-204ENST00000547486 FAM25AB3EWG3 89 aa9.89□□□□□ -0.83
CPSF6-204ENST00000547486 FAM25CB3EWG5 89 aa9.89□□□□□ -0.83
CPSF6-204ENST00000547486 FAM25GB3EWG6 89 aa9.89□□□□□ -0.83
CPSF6-204ENST00000547486 CHEK1O14757 476 aa9.89□□□□□ -0.83
CPSF6-204ENST00000547486 IGKV1-5P01602 117 aa9.89□□□□□ -0.83
CPSF6-204ENST00000547486 CD3DP04234 171 aa9.89□□□□□ -0.83
CPSF6-204ENST00000547486 CTSDP07339 412 aaPredicted RBP9.89□□□□□ -0.83
CPSF6-204ENST00000547486 SMIM18P0DKX4 95 aa9.89□□□□□ -0.83
CPSF6-204ENST00000547486 S100GP29377 79 aa9.89□□□□□ -0.83
CPSF6-204ENST00000547486 PRCDQ00LT1 54 aa9.89□□□□□ -0.83
CPSF6-204ENST00000547486 EWSR1Q01844 656 aaKnown RBP eCLIP9.89□□□□□ -0.83
CPSF6-204ENST00000547486 SPINK9Q5DT21 86 aa9.89□□□□□ -0.83
CPSF6-204ENST00000547486 LCE2DQ5TA82 110 aaPredicted RBP9.89□□□□□ -0.83
CPSF6-204ENST00000547486 LAMTOR1Q6IAA8 161 aa9.89□□□□□ -0.83
CPSF6-204ENST00000547486 LHFPL1Q86WI0 220 aa9.89□□□□□ -0.83
CPSF6-204ENST00000547486 OR4D10Q8NGI6 311 aa9.89□□□□□ -0.83
CPSF6-204ENST00000547486 OR52I2Q8NH67 350 aa9.89□□□□□ -0.83
CPSF6-204ENST00000547486 ABHD1Q96SE0 405 aa9.89□□□□□ -0.83
CPSF6-204ENST00000547486 RNF2Q99496 336 aa9.89□□□□□ -0.83
CPSF6-204ENST00000547486 A0A0B4J293 547 aa9.88□□□□□ -0.83
CPSF6-204ENST00000547486 IGHV7-4-1A0A0J9YVY3 117 aa9.88□□□□□ -0.83
CPSF6-204ENST00000547486 MT-CO2P00403 227 aa9.88□□□□□ -0.83
CPSF6-204ENST00000547486 P0C879 139 aa9.88□□□□□ -0.83
CPSF6-204ENST00000547486 FCGR2BP31994 310 aaPredicted RBP9.88□□□□□ -0.83
CPSF6-204ENST00000547486 MFAP4P55083 255 aa9.88□□□□□ -0.83
CPSF6-204ENST00000547486 RND3P61587 244 aa9.88□□□□□ -0.83
CPSF6-204ENST00000547486 ZNF114Q8NC26 417 aa9.88□□□□□ -0.83
CPSF6-204ENST00000547486 OR10C1Q96KK4 312 aa9.88□□□□□ -0.83
CPSF6-204ENST00000547486 TP53RKQ96S44 253 aa9.88□□□□□ -0.83
CPSF6-204ENST00000547486 RHPN1-AS1Q9BWJ2 59 aa9.88□□□□□ -0.83
CPSF6-204ENST00000547486 NXF2Q9GZY0 626 aaKnown RBP9.88□□□□□ -0.83
CPSF6-204ENST00000547486 MTFP1Q9UDX5 166 aa9.88□□□□□ -0.83
CPSF6-204ENST00000547486 IGHV3OR16-13A0A075B7E8 117 aa9.87□□□□□ -0.83
CPSF6-204ENST00000547486 IGHV3-74A0A0B4J1X5 117 aa9.87□□□□□ -0.83
CPSF6-204ENST00000547486 A0A0J9YWU9 116 aa9.87□□□□□ -0.83
CPSF6-204ENST00000547486 NUPL2O15504 423 aaKnown RBP9.87□□□□□ -0.83
CPSF6-204ENST00000547486 SPRY2O43597 315 aa9.87□□□□□ -0.83
CPSF6-204ENST00000547486 YIF1AO95070 293 aa9.87□□□□□ -0.83
CPSF6-204ENST00000547486 GABARAPO95166 117 aa9.87□□□□□ -0.83
CPSF6-204ENST00000547486 PGAM2P15259 253 aa9.87□□□□□ -0.83
CPSF6-204ENST00000547486 ZNF182P17025 639 aaPredicted RBP9.87□□□□□ -0.83
CPSF6-204ENST00000547486 RPL35AP18077 110 aaKnown RBP9.87□□□□□ -0.83
CPSF6-204ENST00000547486 PIGPP57054 158 aa9.87□□□□□ -0.83
CPSF6-204ENST00000547486 RELQ04864 619 aaPredicted RBP9.87□□□□□ -0.83
CPSF6-204ENST00000547486 ZNF124Q15973 351 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms