RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 CEP192Q8TEP8 1941 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 FAM90A10PA6NDY2 464 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 FAM90A18PA6NE21 464 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 FAM90A16PA6NEW6 464 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 FAM90A20PA6NIJ5 464 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 FAM90A8PA6NJQ4 464 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 FAM90A7PA6NKC0 464 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 FAM90A22PA8MWA6 464 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 FAM90A12PA8MX19 464 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 FAM90A5PA8MXJ8 464 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 FAM90A23PA8MXZ1 464 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 GNG7O60262 68 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 GCGP01275 180 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 FAM90A15PP0C7V4 464 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 FAM90A13PP0C7W8 464 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 FAM90A14PP0C7W9 464 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 FAM90A24PP0C7X0 464 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 CBLN1P23435 193 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 NPY1RP25929 384 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 EAF1Q96JC9 268 aaPredicted RBP8.16□□□□□ -1.1
TRAF1-203ENST00000546084 CIB3Q96Q77 187 aaPredicted RBP8.16□□□□□ -1.1
TRAF1-203ENST00000546084 SELENOKQ9Y6D0 94 aa8.16□□□□□ -1.1
TRAF1-203ENST00000546084 IGHV2OR16-5A0A0B4J2B6 119 aa8.15□□□□□ -1.1
TRAF1-203ENST00000546084 CA1P00915 261 aaPredicted RBP8.15□□□□□ -1.1
TRAF1-203ENST00000546084 PFN1P07737 140 aaKnown RBP8.15□□□□□ -1.1
TRAF1-203ENST00000546084 OR10J1P30954 320 aa8.15□□□□□ -1.1
TRAF1-203ENST00000546084 KIR2DL2P43627 348 aaPredicted RBP8.15□□□□□ -1.1
TRAF1-203ENST00000546084 SPATA31B1PQ5VZV4 182 aa8.15□□□□□ -1.1
TRAF1-203ENST00000546084 TRAT1Q6PIZ9 186 aa8.15□□□□□ -1.1
TRAF1-203ENST00000546084 HAPLN4Q86UW8 402 aa8.15□□□□□ -1.1
TRAF1-203ENST00000546084 ATOH7Q8N100 152 aa8.15□□□□□ -1.1
TRAF1-203ENST00000546084 OR10W1Q8NGF6 305 aa8.15□□□□□ -1.1
TRAF1-203ENST00000546084 SAP30LQ9HAJ7 183 aa8.15□□□□□ -1.1
TRAF1-203ENST00000546084 CALYQ9NYX4 217 aa8.15□□□□□ -1.1
TRAF1-203ENST00000546084 PAM16Q9Y3D7 125 aa8.15□□□□□ -1.1
TRAF1-203ENST00000546084 MKRN2OSH3BPM6 223 aa8.15□□□□□ -1.1
TRAF1-203ENST00000546084 K7EM74 188 aa8.15□□□□□ -1.1
TRAF1-203ENST00000546084 COQ2Q96H96 371 aa8.15□□□□□ -1.1
TRAF1-203ENST00000546084 TBX15Q96SF7 602 aa8.15□□□□□ -1.1
TRAF1-203ENST00000546084 MS4A5Q9H3V2 200 aa8.15□□□□□ -1.1
TRAF1-203ENST00000546084 SSUH2Q9Y2M2 353 aa8.15□□□□□ -1.1
TRAF1-203ENST00000546084 APOA2P02652 100 aa8.15□□□□□ -1.11
TRAF1-203ENST00000546084 CSN3P07498 182 aa8.15□□□□□ -1.11
TRAF1-203ENST00000546084 FAM87AP0C7U9 286 aa8.15□□□□□ -1.11
TRAF1-203ENST00000546084 CRYBB3P26998 211 aa8.15□□□□□ -1.11
TRAF1-203ENST00000546084 UTF1Q5T230 341 aa8.15□□□□□ -1.11
TRAF1-203ENST00000546084 Q6ZR03 302 aa8.15□□□□□ -1.11
TRAF1-203ENST00000546084 ZNF439Q8NDP4 499 aa8.15□□□□□ -1.11
TRAF1-203ENST00000546084 RNASE8Q8TDE3 154 aaKnown RBP8.15□□□□□ -1.11
TRAF1-203ENST00000546084 MUC21A0A0G2JKD1 596 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 MUC21A0A140T8X8 626 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 SCO2A0A1W2PP80 73 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 CGAP01215 116 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 CRYABP02511 175 aaKnown RBP8.14□□□□□ -1.11
TRAF1-203ENST00000546084 RBP4P02753 201 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 IGFBP2P18065 325 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 CEACAM8P31997 349 aaPredicted RBP8.14□□□□□ -1.11
TRAF1-203ENST00000546084 ZNF137PP52743 207 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 MUC21Q5SSG8 566 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 LDLRAD2Q5SZI1 272 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 CD177Q8N6Q3 437 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 OR1L6Q8NGR2 347 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 OR1B1Q8NGR6 318 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 LSM10Q969L4 123 aaKnown RBP8.14□□□□□ -1.11
TRAF1-203ENST00000546084 TMEM45BQ96B21 275 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 ANAPC16Q96DE5 110 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 NPCDR1Q9BY65 106 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 TECRQ9NZ01 308 aaKnown RBP8.14□□□□□ -1.11
TRAF1-203ENST00000546084 TCF19Q9Y242 345 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 HILPDAQ9Y5L2 63 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 TFPI2P48307 235 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 TNXAQ16473 311 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 RTL8BQ17RB0 113 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 TIGITQ495A1 244 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 ZNF497Q6ZNH5 498 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 Q6ZSR3 168 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 TMEM256Q8N2U0 113 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 LINC01560Q8TB33 94 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 DPF1Q92782 380 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 LINC00470Q9BZP3 86 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 ONECUT1Q9UBC0 465 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 TMSB15BA0A087X1C1 80 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 A6NJY4 79 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 C10orf142B7Z368 130 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 TMEM250H0YL14 139 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 MOSP00540 346 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 KRTCAP3Q53RY4 240 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 Q6P435 159 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 DBX2Q6ZNG2 339 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 SLC35E1Q96K37 410 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 ZNF48Q96MX3 618 aaPredicted RBP8.14□□□□□ -1.11
TRAF1-203ENST00000546084 PKIBQ9C010 78 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 OR6C3Q9NZP0 311 aa8.14□□□□□ -1.11
TRAF1-203ENST00000546084 IGHV1-18A0A0C4DH31 117 aa8.13□□□□□ -1.11
TRAF1-203ENST00000546084 PRR33A8MZF0 331 aa8.13□□□□□ -1.11
TRAF1-203ENST00000546084 COX7A2P2O60397 106 aa8.13□□□□□ -1.11
TRAF1-203ENST00000546084 RAB7AP51149 207 aa8.13□□□□□ -1.11
TRAF1-203ENST00000546084 UBE2L3P68036 154 aaKnown RBP8.13□□□□□ -1.11
TRAF1-203ENST00000546084 SAMD13Q5VXD3 122 aa8.13□□□□□ -1.11
TRAF1-203ENST00000546084 C19orf35Q6ZS72 473 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms