RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 CA1P00915 261 aaPredicted RBP11.67□□□□□ -0.54
SRP54-202ENST00000546080 TAS2R45P59539 299 aa11.67□□□□□ -0.54
SRP54-202ENST00000546080 HSPE1P61604 102 aaKnown RBP11.67□□□□□ -0.54
SRP54-202ENST00000546080 CD177Q8N6Q3 437 aa11.67□□□□□ -0.54
SRP54-202ENST00000546080 ZNF503Q96F45 646 aa11.67□□□□□ -0.54
SRP54-202ENST00000546080 IGF2BP2-AS1Q96M15 143 aa11.67□□□□□ -0.54
SRP54-202ENST00000546080 HINT2Q9BX68 163 aa11.67□□□□□ -0.54
SRP54-202ENST00000546080 FOXA2Q9Y261 457 aaPredicted RBP11.67□□□□□ -0.54
SRP54-202ENST00000546080 MUC3AQ02505 3323 aa11.67□□□□□ -0.54
SRP54-202ENST00000546080 TRAV9-2A0A087WT02 112 aa11.67□□□□□ -0.54
SRP54-202ENST00000546080 FNDC10F2Z333 226 aa11.67□□□□□ -0.54
SRP54-202ENST00000546080 M0R2Z0 102 aa11.67□□□□□ -0.54
SRP54-202ENST00000546080 TIMM8AO60220 97 aaPredicted RBP11.67□□□□□ -0.54
SRP54-202ENST00000546080 MEOX1P50221 254 aa11.67□□□□□ -0.54
SRP54-202ENST00000546080 Q56UQ5 140 aa11.67□□□□□ -0.54
SRP54-202ENST00000546080 SAPCD1Q5SSQ6 148 aa11.67□□□□□ -0.54
SRP54-202ENST00000546080 FAM90A1Q86YD7 464 aa11.67□□□□□ -0.54
SRP54-202ENST00000546080 ALKBH7Q9BT30 221 aaPredicted RBP11.67□□□□□ -0.54
SRP54-202ENST00000546080 COMMD5Q9GZQ3 224 aa11.67□□□□□ -0.54
SRP54-202ENST00000546080 HCFC1P51610 2035 aa11.66□□□□□ -0.54
SRP54-202ENST00000546080 TET2Q6N021 2002 aaPredicted RBP11.66□□□□□ -0.54
SRP54-202ENST00000546080 FAM181BA6NEQ2 426 aa11.66□□□□□ -0.54
SRP54-202ENST00000546080 K7EP13 123 aa11.66□□□□□ -0.54
SRP54-202ENST00000546080 ITGB1BP1O14713 200 aa11.66□□□□□ -0.54
SRP54-202ENST00000546080 LYZL6O75951 148 aa11.66□□□□□ -0.54
SRP54-202ENST00000546080 PRDX2P32119 198 aa11.66□□□□□ -0.54
SRP54-202ENST00000546080 TNXAQ16473 311 aa11.66□□□□□ -0.54
SRP54-202ENST00000546080 RTL8BQ17RB0 113 aa11.66□□□□□ -0.54
SRP54-202ENST00000546080 OR4A47Q6IF82 309 aa11.66□□□□□ -0.54
SRP54-202ENST00000546080 FAM214BQ7L5A3 538 aa11.66□□□□□ -0.54
SRP54-202ENST00000546080 PNKDQ8N490 385 aa11.66□□□□□ -0.54
SRP54-202ENST00000546080 OR2D3Q8NGH3 330 aa11.66□□□□□ -0.54
SRP54-202ENST00000546080 FAM122AQ96E09 287 aa11.66□□□□□ -0.54
SRP54-202ENST00000546080 IFI27L2Q9H2X8 130 aa11.66□□□□□ -0.54
SRP54-202ENST00000546080 IGHV1-69-2A0A0G2JMI3 117 aa11.65□□□□□ -0.54
SRP54-202ENST00000546080 COTL1Q14019 142 aa11.65□□□□□ -0.54
SRP54-202ENST00000546080 RASL11AQ6T310 242 aa11.65□□□□□ -0.54
SRP54-202ENST00000546080 NHLRC2Q8NBF2 726 aa11.65□□□□□ -0.54
SRP54-202ENST00000546080 WIPF2Q8TF74 440 aaPredicted RBP11.65□□□□□ -0.54
SRP54-202ENST00000546080 LRRC29Q8WV35 223 aa11.65□□□□□ -0.54
SRP54-202ENST00000546080 SSBP3Q9BWW4 388 aaPredicted RBP11.65□□□□□ -0.54
SRP54-202ENST00000546080 TMEM14BQ9NUH8 114 aa11.65□□□□□ -0.54
SRP54-202ENST00000546080 IGHV2OR16-5A0A0B4J2B6 119 aa11.65□□□□□ -0.54
SRP54-202ENST00000546080 A0A1W2PRE2 83 aa11.65□□□□□ -0.54
SRP54-202ENST00000546080 PATE3B3GLJ2 98 aa11.65□□□□□ -0.54
SRP54-202ENST00000546080 IGHV1-2P23083 117 aa11.65□□□□□ -0.54
SRP54-202ENST00000546080 TNFSF4P23510 183 aa11.65□□□□□ -0.54
SRP54-202ENST00000546080 ZNF134P52741 427 aa11.65□□□□□ -0.54
SRP54-202ENST00000546080 UBE2G1P62253 170 aa11.65□□□□□ -0.54
SRP54-202ENST00000546080 FBLN7Q53RD9 439 aa11.65□□□□□ -0.54
SRP54-202ENST00000546080 SPACA3Q8IXA5 215 aa11.65□□□□□ -0.54
SRP54-202ENST00000546080 DDB2Q92466 427 aa11.65□□□□□ -0.54
SRP54-202ENST00000546080 SAP30LQ9HAJ7 183 aa11.65□□□□□ -0.54
SRP54-202ENST00000546080 DUSP13Q9UII6 198 aa11.65□□□□□ -0.54
SRP54-202ENST00000546080 FZR1Q9UM11 496 aa11.65□□□□□ -0.54
SRP54-202ENST00000546080 DOCK10Q96BY6 2186 aa11.65□□□□□ -0.55
SRP54-202ENST00000546080 IGLC7A0M8Q6 106 aa11.64□□□□□ -0.55
SRP54-202ENST00000546080 GATA2P23769 480 aaPredicted RBP11.64□□□□□ -0.55
SRP54-202ENST00000546080 CDKN1BP46527 198 aa11.64□□□□□ -0.55
SRP54-202ENST00000546080 EBLN2Q6P2I7 272 aa11.64□□□□□ -0.55
SRP54-202ENST00000546080 RNASEKQ6P5S7 137 aaKnown RBP11.64□□□□□ -0.55
SRP54-202ENST00000546080 OR4C5Q8NGB2 326 aa11.64□□□□□ -0.55
SRP54-202ENST00000546080 OR8B3Q8NGG8 313 aa11.64□□□□□ -0.55
SRP54-202ENST00000546080 OR8B2Q96RD0 313 aa11.64□□□□□ -0.55
SRP54-202ENST00000546080 OR51B2Q9Y5P1 312 aa11.64□□□□□ -0.55
SRP54-202ENST00000546080 MYOD1P15172 320 aa11.64□□□□□ -0.55
SRP54-202ENST00000546080 IGLL1P15814 213 aa11.64□□□□□ -0.55
SRP54-202ENST00000546080 MFAP2P55001 183 aa11.64□□□□□ -0.55
SRP54-202ENST00000546080 LOXL3P58215 753 aa11.64□□□□□ -0.55
SRP54-202ENST00000546080 TBR1Q16650 682 aa11.64□□□□□ -0.55
SRP54-202ENST00000546080 INO80CQ6PI98 192 aaPredicted RBP11.64□□□□□ -0.55
SRP54-202ENST00000546080 LYG1Q8N1E2 194 aa11.64□□□□□ -0.55
SRP54-202ENST00000546080 FAM168AQ92567 244 aa11.64□□□□□ -0.55
SRP54-202ENST00000546080 C19orf24Q9BVV8 132 aa11.64□□□□□ -0.55
SRP54-202ENST00000546080 DEFB127Q9H1M4 99 aa11.64□□□□□ -0.55
SRP54-202ENST00000546080 IDI2-AS1Q9NZ38 188 aa11.64□□□□□ -0.55
SRP54-202ENST00000546080 SIT1Q9Y3P8 196 aa11.64□□□□□ -0.55
SRP54-202ENST00000546080 DOCK7Q96N67 2140 aa11.64□□□□□ -0.55
SRP54-202ENST00000546080 LOC105371242A0A075B767 164 aa11.63□□□□□ -0.55
SRP54-202ENST00000546080 IGHV2-70DA0A0C4DH43 119 aa11.63□□□□□ -0.55
SRP54-202ENST00000546080 H0YJW9 148 aa11.63□□□□□ -0.55
SRP54-202ENST00000546080 C8orf88P0DMB2 117 aa11.63□□□□□ -0.55
SRP54-202ENST00000546080 ARG2P78540 354 aa11.63□□□□□ -0.55
SRP54-202ENST00000546080 KLF5Q13887 457 aaPredicted RBP11.63□□□□□ -0.55
SRP54-202ENST00000546080 MOB3BQ86TA1 216 aa11.63□□□□□ -0.55
SRP54-202ENST00000546080 MUC15Q8N387 334 aa11.63□□□□□ -0.55
SRP54-202ENST00000546080 OR4F17Q8NGA8 305 aa11.63□□□□□ -0.55
SRP54-202ENST00000546080 TRIB1Q96RU8 372 aa11.63□□□□□ -0.55
SRP54-202ENST00000546080 KLF13Q9Y2Y9 288 aaPredicted RBP11.63□□□□□ -0.55
SRP54-202ENST00000546080 F2RL2O00254 374 aa11.62□□□□□ -0.55
SRP54-202ENST00000546080 C1orf229Q6ZS94 237 aaPredicted RBP11.62□□□□□ -0.55
SRP54-202ENST00000546080 DEFB123Q8N688 67 aa11.62□□□□□ -0.55
SRP54-202ENST00000546080 PPP1R35Q8TAP8 253 aa11.62□□□□□ -0.55
SRP54-202ENST00000546080 OR2V2Q96R30 315 aa11.62□□□□□ -0.55
SRP54-202ENST00000546080 TNFRSF19Q9NS68 423 aa11.62□□□□□ -0.55
SRP54-202ENST00000546080 ZNF355PQ9NSJ1 428 aa11.62□□□□□ -0.55
SRP54-202ENST00000546080 CLCF1Q9UBD9 225 aa11.62□□□□□ -0.55
SRP54-202ENST00000546080 IGKV1OR2-108A0A075B7D4 117 aa11.62□□□□□ -0.55
SRP54-202ENST00000546080 KLRC4-KLRK1H3BQV0 150 aa11.62□□□□□ -0.55
SRP54-202ENST00000546080 J3QR06 171 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms