RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 OR5A2Q8NGI9 324 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 OR9I1Q8NGQ6 314 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 OR13C2Q8NGS9 318 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 OR2K2Q8NGT1 345 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 OR51A7Q8NH64 312 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 CAPSLQ8WWF8 208 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 SPTSSAQ969W0 71 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 REEP6Q96HR9 211 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 RNF170Q96K19 258 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 OR4C12Q96R67 309 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 MICU1Q9BPX6 476 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 HSPB9Q9BQS6 159 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 TMED9Q9BVK6 235 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 RTL8AQ9BWD3 113 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 PARD6BQ9BYG5 372 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 PARP12Q9H0J9 701 aaKnown RBP1.73□□□□□ -2.13
SNHG1-224ENST00000545688 SAV1Q9H4B6 383 aaPredicted RBP1.73□□□□□ -2.13
SNHG1-224ENST00000545688 RGCCQ9H4X1 137 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 TUBA4BQ9H853 241 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 ABCB9Q9NP78 766 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 ZC4H2Q9NQZ6 224 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 TAS2R3Q9NYW6 316 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 ACTR3BQ9P1U1 418 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 SHPKQ9UHJ6 478 aa1.73□□□□□ -2.13
SNHG1-224ENST00000545688 MRM2Q9UI43 246 aaKnown RBP1.73□□□□□ -2.13
SNHG1-224ENST00000545688 A0A087WUU8 490 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 TRAV39A0A0B4J263 110 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 PQLC2LA1A4F0 135 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 EFCAB9A8MZ26 197 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 ZNF878C9JN71 531 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 G3V318 75 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 J3QT63 122 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 BPY2O14599 106 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 MPZL2O60487 215 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 NDUFB2O95178 105 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 CNIH1O95406 144 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 HLA-DRB1P01911 266 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 CD74P04233 296 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 SHBGP04278 402 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 GLAP06280 429 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 CD7P09564 240 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 OR5H8P0DN80 308 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 PIPP12273 146 aaPredicted RBP1.72□□□□□ -2.13
SNHG1-224ENST00000545688 IFI30P13284 250 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 PTMSP20962 102 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 PPIBP23284 216 aaKnown RBP1.72□□□□□ -2.13
SNHG1-224ENST00000545688 CDK2P24941 298 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 BMI1P35226 326 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 CEACAM3P40198 252 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 GPR4P46093 362 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 OMPP47874 163 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 RORCP51449 518 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 GNG11P61952 73 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 SMIM21Q3B7S5 101 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 KRTAP13-4Q3LI77 160 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 SLC36A3Q495N2 470 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 LINC01590Q5TEZ4 76 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 TTC23Q5W5X9 447 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 CD200R1LQ6Q8B3 271 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 TBPL2Q6SJ96 375 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 MBOAT2Q6ZWT7 520 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 MICU2Q8IYU8 434 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 OFCC1Q8IZS5 231 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 DEFB125Q8N687 156 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 ST20-AS1Q8NBB2 130 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 RNF133Q8WVZ7 376 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 FAM3DQ96BQ1 224 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 FLYWCH2Q96CP2 140 aaKnown RBP1.72□□□□□ -2.13
SNHG1-224ENST00000545688 PPP1R36Q96LQ0 422 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 PRRC1Q96M27 445 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 ZNF488Q96MN9 340 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 C18orf15Q96N68 181 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 NDEL1Q9GZM8 345 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 WFDC10AQ9H1F0 79 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 NCOR1P1Q9H4R4 102 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 SLC22A13Q9Y226 551 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 NUBP2Q9Y5Y2 271 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 COMMD3-BMI1R4GMX3 469 aa1.72□□□□□ -2.13
SNHG1-224ENST00000545688 IGHV1-3A0A0C4DH29 117 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 KBTBD11-OT1A0A1B0GTJ5 212 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 DHRS12A0PJE2 317 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 OR11H12B2RN74 326 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 ZNF736B4DX44 427 aaPredicted RBP1.71□□□□□ -2.14
SNHG1-224ENST00000545688 BIRC5O15392 142 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 SNNO75324 88 aaPredicted RBP1.71□□□□□ -2.14
SNHG1-224ENST00000545688 CSN2P05814 226 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 HIST1H1CP16403 213 aaKnown RBP1.71□□□□□ -2.14
SNHG1-224ENST00000545688 CEACAM6P40199 344 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 RPS27P42677 84 aaKnown RBP1.71□□□□□ -2.14
SNHG1-224ENST00000545688 OR1E2P47887 323 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 RAB7AP51149 207 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 ZNF137PP52743 207 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 EDDM3BP56851 147 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 ZNF121P58317 390 aaPredicted RBP1.71□□□□□ -2.14
SNHG1-224ENST00000545688 TAS2R41P59536 307 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 GRB2P62993 217 aaKnown RBP1.71□□□□□ -2.14
SNHG1-224ENST00000545688 IL24Q13007 206 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 PRAMEF5Q5TYX0 476 aa1.71□□□□□ -2.14
SNHG1-224ENST00000545688 HAGHLQ6PII5 290 aaPredicted RBP1.71□□□□□ -2.14
SNHG1-224ENST00000545688 DNM1P34Q6PK57 102 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms