RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 HSD17B13Q7Z5P4 300 aaPredicted RBP5.66□□□□□ -1.5
CPSF7-224ENST00000544990 OR2C3Q8N628 320 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 CCDC71LQ8N9Z2 235 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 OR6Q1Q8NGQ2 317 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 OR1L8Q8NGR8 309 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 QTRT1Q9BXR0 403 aaKnown RBP5.66□□□□□ -1.5
CPSF7-224ENST00000544990 SLIRPQ9GZT3 109 aaKnown RBP5.66□□□□□ -1.5
CPSF7-224ENST00000544990 NXF2Q9GZY0 626 aaKnown RBP5.66□□□□□ -1.5
CPSF7-224ENST00000544990 THYN1Q9P016 225 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 COPZ2Q9P299 210 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 PRNDQ9UKY0 176 aa5.66□□□□□ -1.5
CPSF7-224ENST00000544990 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.65□□□□□ -1.5
CPSF7-224ENST00000544990 TEX50A0A1B0GTY4 177 aa5.65□□□□□ -1.5
CPSF7-224ENST00000544990 WI2-2373I1.2A0A1W2PRP0 233 aa5.65□□□□□ -1.5
CPSF7-224ENST00000544990 PRSS29PA6NIE9 313 aa5.65□□□□□ -1.5
CPSF7-224ENST00000544990 ZNF701M0R085 212 aaPredicted RBP5.65□□□□□ -1.5
CPSF7-224ENST00000544990 GSTZ1O43708 216 aaPredicted RBP5.65□□□□□ -1.5
CPSF7-224ENST00000544990 B3GALNT1O75752 331 aa5.65□□□□□ -1.5
CPSF7-224ENST00000544990 MYOD1P15172 320 aa5.65□□□□□ -1.5
CPSF7-224ENST00000544990 AREGP15514 252 aa5.65□□□□□ -1.5
CPSF7-224ENST00000544990 PPP5CP53041 499 aa5.65□□□□□ -1.5
CPSF7-224ENST00000544990 DEFA5Q01523 94 aa5.65□□□□□ -1.5
CPSF7-224ENST00000544990 NHLH2Q02577 135 aa5.65□□□□□ -1.5
CPSF7-224ENST00000544990 KLF5Q13887 457 aaPredicted RBP5.65□□□□□ -1.5
CPSF7-224ENST00000544990 OR4D10Q8NGI6 311 aa5.65□□□□□ -1.5
CPSF7-224ENST00000544990 OR5B3Q8NH48 314 aa5.65□□□□□ -1.5
CPSF7-224ENST00000544990 OR4A16Q8NH70 328 aa5.65□□□□□ -1.5
CPSF7-224ENST00000544990 EEF1AKMT3Q96AZ1 226 aa5.65□□□□□ -1.5
CPSF7-224ENST00000544990 CXorf58Q96LI9 332 aa5.65□□□□□ -1.5
CPSF7-224ENST00000544990 TMEM56Q96MV1 263 aa5.65□□□□□ -1.5
CPSF7-224ENST00000544990 SCGB3A2Q96PL1 93 aa5.65□□□□□ -1.5
CPSF7-224ENST00000544990 PRRT1Q99946 306 aa5.65□□□□□ -1.5
CPSF7-224ENST00000544990 HINT2Q9BX68 163 aa5.65□□□□□ -1.5
CPSF7-224ENST00000544990 PEMTQ9UBM1 199 aa5.65□□□□□ -1.5
CPSF7-224ENST00000544990 SCP2D1Q9UJQ7 156 aa5.65□□□□□ -1.5
CPSF7-224ENST00000544990 C14orf166Q9Y224 244 aaKnown RBP5.65□□□□□ -1.5
CPSF7-224ENST00000544990 ZNF256Q9Y2P7 627 aaPredicted RBP5.65□□□□□ -1.5
CPSF7-224ENST00000544990 OR51B2Q9Y5P1 312 aa5.65□□□□□ -1.5
CPSF7-224ENST00000544990 SORL1Q92673 2214 aa5.64□□□□□ -1.51
CPSF7-224ENST00000544990 TRBV7-1A0A0A6YYK4 115 aa5.64□□□□□ -1.51
CPSF7-224ENST00000544990 C3orf85A0A1B0GTC6 90 aa5.64□□□□□ -1.51
CPSF7-224ENST00000544990 A0A1B0GW64 132 aa5.64□□□□□ -1.51
CPSF7-224ENST00000544990 IGLC7A0M8Q6 106 aa5.64□□□□□ -1.51
CPSF7-224ENST00000544990 ANKRD20A5PA0PJZ0 165 aa5.64□□□□□ -1.51
CPSF7-224ENST00000544990 CGB1A6NKQ9 187 aa5.64□□□□□ -1.51
CPSF7-224ENST00000544990 H0Y980 276 aa5.64□□□□□ -1.51
CPSF7-224ENST00000544990 GGCTO75223 188 aaKnown RBP5.64□□□□□ -1.51
CPSF7-224ENST00000544990 RBMXL2O75526 392 aaKnown RBP5.64□□□□□ -1.51
CPSF7-224ENST00000544990 TRBV12-3P01733 135 aa5.64□□□□□ -1.51
CPSF7-224ENST00000544990 REG1AP05451 166 aa5.64□□□□□ -1.51
CPSF7-224ENST00000544990 CTSDP07339 412 aaPredicted RBP5.64□□□□□ -1.51
CPSF7-224ENST00000544990 OR13C7P0DN81 318 aa5.64□□□□□ -1.51
CPSF7-224ENST00000544990 GCSHP23434 173 aa5.64□□□□□ -1.51
CPSF7-224ENST00000544990 FAUP35544 74 aaKnown RBP5.64□□□□□ -1.51
CPSF7-224ENST00000544990 SYNJ2BPP57105 145 aa5.64□□□□□ -1.51
CPSF7-224ENST00000544990 SURF2Q15527 256 aaPredicted RBP5.64□□□□□ -1.51
CPSF7-224ENST00000544990 KLK9Q2XQG4 91 aa5.64□□□□□ -1.51
CPSF7-224ENST00000544990 TRIM16LQ309B1 348 aa5.64□□□□□ -1.51
CPSF7-224ENST00000544990 SLC25A24Q6NUK1 477 aa5.64□□□□□ -1.51
CPSF7-224ENST00000544990 OR9G4Q8NGQ1 327 aa5.64□□□□□ -1.51
CPSF7-224ENST00000544990 OR1L6Q8NGR2 347 aa5.64□□□□□ -1.51
CPSF7-224ENST00000544990 OR13C8Q8NGS7 320 aa5.64□□□□□ -1.51
CPSF7-224ENST00000544990 MARCH1Q8TCQ1 289 aa5.64□□□□□ -1.51
CPSF7-224ENST00000544990 LSM10Q969L4 123 aaKnown RBP5.64□□□□□ -1.51
CPSF7-224ENST00000544990 SEC22AQ96IW7 307 aa5.64□□□□□ -1.51
CPSF7-224ENST00000544990 PRR25Q96S07 402 aa5.64□□□□□ -1.51
CPSF7-224ENST00000544990 SOSTQ9BQB4 213 aa5.64□□□□□ -1.51
CPSF7-224ENST00000544990 THAP7Q9BT49 309 aaPredicted RBP5.64□□□□□ -1.51
CPSF7-224ENST00000544990 NDUFA4L2Q9NRX3 87 aa5.64□□□□□ -1.51
CPSF7-224ENST00000544990 KLK9Q9UKQ9 250 aa5.64□□□□□ -1.51
CPSF7-224ENST00000544990 NSG2Q9Y328 171 aa5.64□□□□□ -1.51
CPSF7-224ENST00000544990 IGLV11-55A0A075B6I3 123 aa5.63□□□□□ -1.51
CPSF7-224ENST00000544990 TEX13DA0A0J9YY54 714 aaPredicted RBP5.63□□□□□ -1.51
CPSF7-224ENST00000544990 C15orf61A6NNL5 157 aa5.63□□□□□ -1.51
CPSF7-224ENST00000544990 BMPR1BO00238 502 aa5.63□□□□□ -1.51
CPSF7-224ENST00000544990 NDUFB8O95169 186 aa5.63□□□□□ -1.51
CPSF7-224ENST00000544990 ARL3P36405 182 aa5.63□□□□□ -1.51
CPSF7-224ENST00000544990 AKR1C2P52895 323 aa5.63□□□□□ -1.51
CPSF7-224ENST00000544990 AP3S2P59780 193 aa5.63□□□□□ -1.51
CPSF7-224ENST00000544990 FAM106AQ4KMX7 169 aa5.63□□□□□ -1.51
CPSF7-224ENST00000544990 PYDC2Q56P42 97 aa5.63□□□□□ -1.51
CPSF7-224ENST00000544990 FAAP20Q6NZ36 180 aa5.63□□□□□ -1.51
CPSF7-224ENST00000544990 CLEC19AQ6UXS0 136 aa5.63□□□□□ -1.51
CPSF7-224ENST00000544990 C19orf35Q6ZS72 473 aa5.63□□□□□ -1.51
CPSF7-224ENST00000544990 GDPD1Q8N9F7 314 aa5.63□□□□□ -1.51
CPSF7-224ENST00000544990 OR10W1Q8NGF6 305 aa5.63□□□□□ -1.51
CPSF7-224ENST00000544990 OR51S1Q8NGJ8 323 aa5.63□□□□□ -1.51
CPSF7-224ENST00000544990 OR4C16Q8NGL9 310 aa5.63□□□□□ -1.51
CPSF7-224ENST00000544990 RNASE11Q8TAA1 199 aaKnown RBP5.63□□□□□ -1.51
CPSF7-224ENST00000544990 MRGPRFQ96AM1 343 aa5.63□□□□□ -1.51
CPSF7-224ENST00000544990 RRNAD1Q96FB5 475 aaKnown RBP5.63□□□□□ -1.51
CPSF7-224ENST00000544990 TP53RKQ96S44 253 aa5.63□□□□□ -1.51
CPSF7-224ENST00000544990 PDCD10Q9BUL8 212 aa5.63□□□□□ -1.51
CPSF7-224ENST00000544990 RBM38Q9H0Z9 239 aaKnown RBP5.63□□□□□ -1.51
CPSF7-224ENST00000544990 TMEM14BQ9NUH8 114 aa5.63□□□□□ -1.51
CPSF7-224ENST00000544990 MCUBQ9NWR8 336 aa5.63□□□□□ -1.51
CPSF7-224ENST00000544990 NDUFA13Q9P0J0 144 aa5.63□□□□□ -1.51
CPSF7-224ENST00000544990 GPR132Q9UNW8 380 aa5.63□□□□□ -1.51
CPSF7-224ENST00000544990 KCNIP3Q9Y2W7 256 aa5.63□□□□□ -1.51
CPSF7-224ENST00000544990 A0A087WWL8 130 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms