RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 EVI2AP22794 236 aa16.93■□□□□ 0.3
BPTF-208ENST00000544778 OR52E5Q8NH55 327 aa16.93■□□□□ 0.3
BPTF-208ENST00000544778 RGPD3A6NKT7 1758 aaPredicted RBP16.93■□□□□ 0.3
BPTF-208ENST00000544778 TM4SF5O14894 197 aa16.93■□□□□ 0.3
BPTF-208ENST00000544778 FHITP49789 147 aa16.93■□□□□ 0.3
BPTF-208ENST00000544778 TMEM187Q14656 261 aa16.93■□□□□ 0.3
BPTF-208ENST00000544778 Q96M66 194 aa16.93■□□□□ 0.3
BPTF-208ENST00000544778 FER1L5A0AVI2 2057 aa16.93■□□□□ 0.3
BPTF-208ENST00000544778 LHX2P50458 406 aa16.93■□□□□ 0.3
BPTF-208ENST00000544778 ZNF585BQ52M93 769 aa16.93■□□□□ 0.3
BPTF-208ENST00000544778 FAM57AQ8TBR7 257 aa16.93■□□□□ 0.3
BPTF-208ENST00000544778 ALX4Q9H161 411 aaPredicted RBP16.93■□□□□ 0.3
BPTF-208ENST00000544778 RPP21Q9H633 154 aaKnown RBP16.93■□□□□ 0.3
BPTF-208ENST00000544778 CD28P10747 220 aa16.93■□□□□ 0.3
BPTF-208ENST00000544778 GLRXP35754 106 aa16.93■□□□□ 0.3
BPTF-208ENST00000544778 PPP1R32Q7Z5V6 425 aa16.93■□□□□ 0.3
BPTF-208ENST00000544778 APCDD1LQ8NCL9 501 aa16.93■□□□□ 0.3
BPTF-208ENST00000544778 NPCDR1Q9BY65 106 aa16.93■□□□□ 0.3
BPTF-208ENST00000544778 IMMP2LQ96T52 175 aa16.92■□□□□ 0.3
BPTF-208ENST00000544778 HOXA3O43365 443 aaPredicted RBP16.92■□□□□ 0.3
BPTF-208ENST00000544778 ASPHD2Q6ICH7 369 aa16.92■□□□□ 0.3
BPTF-208ENST00000544778 GATAD1Q8WUU5 269 aa16.92■□□□□ 0.3
BPTF-208ENST00000544778 SPCS1Q9Y6A9 102 aa16.92■□□□□ 0.3
BPTF-208ENST00000544778 CHD5Q8TDI0 1954 aa16.92■□□□□ 0.3
BPTF-208ENST00000544778 HLA-DQB1P01920 261 aa16.92■□□□□ 0.3
BPTF-208ENST00000544778 IRF3Q14653 427 aa16.92■□□□□ 0.3
BPTF-208ENST00000544778 G6PC2Q9NQR9 355 aa16.92■□□□□ 0.3
BPTF-208ENST00000544778 C19orf67A6NJJ6 358 aa16.92■□□□□ 0.3
BPTF-208ENST00000544778 FAM216BQ8N7L0 139 aa16.92■□□□□ 0.3
BPTF-208ENST00000544778 SPOCK3Q9BQ16 436 aa16.92■□□□□ 0.3
BPTF-208ENST00000544778 SAP30O75446 220 aa16.92■□□□□ 0.3
BPTF-208ENST00000544778 CD33P20138 364 aa16.92■□□□□ 0.3
BPTF-208ENST00000544778 KLF4O43474 513 aa16.91■□□□□ 0.3
BPTF-208ENST00000544778 GATD1Q8NB37 220 aa16.91■□□□□ 0.3
BPTF-208ENST00000544778 COL11A1P12107 1806 aaPredicted RBP16.91■□□□□ 0.3
BPTF-208ENST00000544778 FBLN7Q53RD9 439 aa16.91■□□□□ 0.3
BPTF-208ENST00000544778 IGLV1-36A0A0B4J1U3 117 aa16.91■□□□□ 0.3
BPTF-208ENST00000544778 SRSF7Q16629 238 aaKnown RBP eCLIP16.91■□□□□ 0.36e-6■■■■□ 19.7
BPTF-208ENST00000544778 TRAV14DV4A0A0A6YYC5 116 aa16.91■□□□□ 0.3
BPTF-208ENST00000544778 SRSF6Q13247 344 aaKnown RBP16.91■□□□□ 0.3
BPTF-208ENST00000544778 ORMDL3Q8N138 153 aa16.91■□□□□ 0.3
BPTF-208ENST00000544778 TRBV5-5A0A0J9YX44 114 aa16.91■□□□□ 0.3
BPTF-208ENST00000544778 HBDP02042 147 aa16.91■□□□□ 0.3
BPTF-208ENST00000544778 CECR9P0C854 216 aa16.91■□□□□ 0.3
BPTF-208ENST00000544778 PRB4P10163 310 aaPredicted RBP16.91■□□□□ 0.3
BPTF-208ENST00000544778 EGR4Q05215 589 aa16.91■□□□□ 0.3
BPTF-208ENST00000544778 TMEM86BQ8N661 226 aa16.91■□□□□ 0.3
BPTF-208ENST00000544778 ZNF257Q9Y2Q1 563 aa16.91■□□□□ 0.3
BPTF-208ENST00000544778 YLPM1P49750 1951 aaKnown RBP16.91■□□□□ 0.3
BPTF-208ENST00000544778 LILRA1O75019 489 aa16.9■□□□□ 0.3
BPTF-208ENST00000544778 CELA3AP09093 270 aa16.9■□□□□ 0.3
BPTF-208ENST00000544778 C2orf68Q2NKX9 166 aa16.9■□□□□ 0.3
BPTF-208ENST00000544778 SHANK3Q9BYB0 1731 aa16.9■□□□□ 0.3
BPTF-208ENST00000544778 GCM2O75603 506 aaPredicted RBP16.9■□□□□ 0.3
BPTF-208ENST00000544778 RIPPLY3P57055 190 aa16.9■□□□□ 0.3
BPTF-208ENST00000544778 VKORC1Q9BQB6 163 aa16.9■□□□□ 0.3
BPTF-208ENST00000544778 EDA2RQ9HAV5 297 aa16.9■□□□□ 0.3
BPTF-208ENST00000544778 IL36BQ9NZH7 164 aa16.9■□□□□ 0.3
BPTF-208ENST00000544778 IGHV3-73A0A0B4J1V6 119 aa16.9■□□□□ 0.3
BPTF-208ENST00000544778 GGTLC3B5MD39 225 aa16.9■□□□□ 0.3
BPTF-208ENST00000544778 COX5BP10606 129 aa16.9■□□□□ 0.3
BPTF-208ENST00000544778 FAM19A2Q8N3H0 131 aa16.9■□□□□ 0.3
BPTF-208ENST00000544778 CA7P43166 264 aa16.9■□□□□ 0.3
BPTF-208ENST00000544778 ERVK11-1P61568 191 aa16.9■□□□□ 0.3
BPTF-208ENST00000544778 SEPSECSQ9HD40 501 aaKnown RBP16.9■□□□□ 0.3
BPTF-208ENST00000544778 ADAMTSL1Q8N6G6 1762 aa16.9■□□□□ 0.3
BPTF-208ENST00000544778 PRSS23O95084 383 aa16.9■□□□□ 0.3
BPTF-208ENST00000544778 PUSL1Q8N0Z8 303 aaKnown RBP16.9■□□□□ 0.3
BPTF-208ENST00000544778 JPT2Q9H910 190 aa16.9■□□□□ 0.3
BPTF-208ENST00000544778 RPL35AP18077 110 aaKnown RBP16.9■□□□□ 0.3
BPTF-208ENST00000544778 ZNF660Q6AZW8 331 aaPredicted RBP16.9■□□□□ 0.3
BPTF-208ENST00000544778 CTSBP07858 339 aa16.89■□□□□ 0.3
BPTF-208ENST00000544778 PILRAQ9UKJ1 303 aa16.89■□□□□ 0.3
BPTF-208ENST00000544778 LAMB2P55268 1798 aa16.89■□□□□ 0.29
BPTF-208ENST00000544778 COQ2Q96H96 371 aa16.89■□□□□ 0.29
BPTF-208ENST00000544778 LIMS1P48059 325 aa16.89■□□□□ 0.29
BPTF-208ENST00000544778 ZNF98A6NK75 572 aa16.89■□□□□ 0.29
BPTF-208ENST00000544778 PRADC1Q9BSG0 188 aa16.89■□□□□ 0.29
BPTF-208ENST00000544778 DANCRP0C864 163 aa16.89■□□□□ 0.29
BPTF-208ENST00000544778 GATA2P23769 480 aaPredicted RBP16.89■□□□□ 0.29
BPTF-208ENST00000544778 PPIFP30405 207 aaKnown RBP16.89■□□□□ 0.29
BPTF-208ENST00000544778 TRAV8-4A0A0B4J246 113 aa16.89■□□□□ 0.29
BPTF-208ENST00000544778 CYB5R2Q6BCY4 276 aa16.89■□□□□ 0.29
BPTF-208ENST00000544778 PSMG3Q9BT73 122 aaPredicted RBP16.89■□□□□ 0.29
BPTF-208ENST00000544778 TIAF1O95411 115 aa16.88■□□□□ 0.29
BPTF-208ENST00000544778 MRPS18AQ9NVS2 196 aaKnown RBP16.88■□□□□ 0.29
BPTF-208ENST00000544778 GNG5P63218 68 aa16.88■□□□□ 0.29
BPTF-208ENST00000544778 OSR1Q8TAX0 266 aaPredicted RBP16.88■□□□□ 0.29
BPTF-208ENST00000544778 DEFB104AQ8WTQ1 72 aa16.88■□□□□ 0.29
BPTF-208ENST00000544778 RFPL3SP0C7P2 107 aa16.88■□□□□ 0.29
BPTF-208ENST00000544778 LY6DQ14210 128 aa16.88■□□□□ 0.29
BPTF-208ENST00000544778 RIPPLY2Q5TAB7 128 aa16.88■□□□□ 0.29
BPTF-208ENST00000544778 SEC16AO15027 2179 aa16.88■□□□□ 0.29
BPTF-208ENST00000544778 FANCMQ8IYD8 2048 aa16.88■□□□□ 0.29
BPTF-208ENST00000544778 RPL32P62910 135 aaKnown RBP16.87■□□□□ 0.29
BPTF-208ENST00000544778 MESP2Q0VG99 397 aa16.87■□□□□ 0.29
BPTF-208ENST00000544778 HIGD1CA8MV81 97 aa16.87■□□□□ 0.29
BPTF-208ENST00000544778 MIR17HGQ75NE6 70 aa16.87■□□□□ 0.29
BPTF-208ENST00000544778 INS-IGF2F8WCM5 200 aa16.87■□□□□ 0.29
BPTF-208ENST00000544778 INSP01308 110 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms