RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 TMEM14BQ9NUH8 114 aa4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 MCUBQ9NWR8 336 aa4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 KLK11Q9UBX7 282 aa4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 PFDN2Q9UHV9 154 aa4.31□□□□□ -1.72
CLSTN3-215ENST00000544584 TRAV25A0A0B4J276 109 aa4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 TEX50A0A1B0GTY4 177 aa4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 WI2-2373I1.2A0A1W2PRP0 233 aa4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 C15orf61A6NNL5 157 aa4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 M0QYG6 137 aa4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 GSTZ1O43708 216 aaPredicted RBP4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 IGLV1-51P01701 117 aa4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 SPNP16150 400 aa4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 S100A7P31151 101 aa4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 HOXA1P49639 335 aaPredicted RBP4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 EIF2B2P49770 351 aaKnown RBP4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 MFAP4P55083 255 aa4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 ATP5IP56385 69 aaPredicted RBP4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 PAFAH1B2P68402 229 aa4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 SPCS2Q15005 226 aa4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 KLK9Q2XQG4 91 aa4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 CNPY1Q3B7I2 92 aa4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 Q56UQ5 140 aa4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 RNASE12Q5GAN4 147 aaKnown RBP4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 ASPHD1Q5U4P2 390 aa4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 ZNF57Q68EA5 555 aaPredicted RBP4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 CLEC19AQ6UXS0 136 aa4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 DUSP18Q8NEJ0 188 aa4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 IL17DQ8TAD2 202 aa4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 DYNC2LI1Q8TCX1 351 aa4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 RBPMSQ93062 196 aaKnown RBP4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 IL22RA2Q969J5 263 aa4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 ISOC1Q96CN7 298 aa4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 CYYR1Q96J86 154 aa4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 PRR25Q96S07 402 aa4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 GINS3Q9BRX5 216 aa4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 NAA50Q9GZZ1 169 aaKnown RBP4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 FXYD6Q9H0Q3 95 aa4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 DAZ1Q9NQZ3 744 aaKnown RBP4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 C21orf62Q9NYP8 219 aa4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 MRPL27Q9P0M9 148 aaKnown RBP4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 KLK9Q9UKQ9 250 aa4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 F11RQ9Y624 299 aaKnown RBP4.3□□□□□ -1.72
CLSTN3-215ENST00000544584 IGLV11-55A0A075B6I3 123 aa4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 TRAV30A0A087WSZ9 112 aa4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 NAP1L6A6NFF2 107 aa4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 A8MZ25 164 aa4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 H3BMQ9 156 aa4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 BMPR1BO00238 502 aa4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 NDUFA4O00483 81 aa4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 CTDSP2O14595 271 aa4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 GNG7O60262 68 aa4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 PRH1P02810 166 aa4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 REG1AP05451 166 aa4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 FABP1P07148 127 aa4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 AREGP15514 252 aa4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 HTR2BP41595 481 aa4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 PPP5CP53041 499 aa4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 BRWD1-AS2P59051 145 aa4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 SPCS3P61009 180 aa4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 SSBP2P81877 361 aaPredicted RBP4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 PRCDQ00LT1 54 aa4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 GUCA2BQ16661 112 aa4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 C10orf55Q5SWW7 151 aa4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 TRIQKQ629K1 86 aa4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 C11orf87Q6NUJ2 197 aa4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 LHFPL1Q86WI0 220 aa4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 OR13C8Q8NGS7 320 aa4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 OR52E5Q8NH55 327 aa4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 MARCH1Q8TCQ1 289 aa4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 MRGPRFQ96AM1 343 aa4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 SEC22AQ96IW7 307 aa4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 SLC25A21Q9BQT8 299 aaPredicted RBP4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 THAP7Q9BT49 309 aaPredicted RBP4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 TMEM222Q9H0R3 208 aa4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 TMEM231Q9H6L2 316 aa4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 NAA60Q9H7X0 242 aa4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 LSM4Q9Y4Z0 139 aaKnown RBP4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 U3KQK5 164 aa4.29□□□□□ -1.72
CLSTN3-215ENST00000544584 DUXBA0A1W2PPF3 345 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 A0A1W2PS18 150 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 IGLC7A0M8Q6 106 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 ANKRD20A5PA0PJZ0 165 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 OR2T8A6NH00 312 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 C2orf70A6NJV1 201 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 C15orf62A8K5M9 175 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 CEBPZOSA8MTT3 80 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 A8MWP6 167 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 INS-IGF2F8WCM5 200 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 C3orf84H3BNL1 204 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 K7EMT4 169 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 TGOLN2O43493 480 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 MED6O75586 246 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 YIF1AO95070 293 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 NDUFB8O95169 186 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 OR2C1O95371 312 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 CDS2O95674 445 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 CSN3P07498 182 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 SLC25A4P12235 298 aa4.28□□□□□ -1.72
CLSTN3-215ENST00000544584 FOLR2P14207 255 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms