RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 YPEL2Q96QA6 119 aa12.92□□□□□ -0.34
SNRNP70-203ENST00000544278 ZFYVE26Q68DK2 2539 aa12.91□□□□□ -0.34
SNRNP70-203ENST00000544278 THBDP07204 575 aa12.91□□□□□ -0.34
SNRNP70-203ENST00000544278 GNB1P62873 340 aa12.91□□□□□ -0.34
SNRNP70-203ENST00000544278 RPL31P62899 125 aaKnown RBP12.91□□□□□ -0.34
SNRNP70-203ENST00000544278 TMEM183AQ8IXX5 376 aa12.91□□□□□ -0.34
SNRNP70-203ENST00000544278 LINC01560Q8TB33 94 aa12.91□□□□□ -0.34
SNRNP70-203ENST00000544278 SCNM1Q9BWG6 230 aa12.91□□□□□ -0.34
SNRNP70-203ENST00000544278 MRPL20Q9BYC9 149 aaKnown RBP12.91□□□□□ -0.34
SNRNP70-203ENST00000544278 SCO2A0A1W2PP80 73 aa12.91□□□□□ -0.34
SNRNP70-203ENST00000544278 C16orf97H3BN30 126 aa12.91□□□□□ -0.34
SNRNP70-203ENST00000544278 MAS1LP35410 378 aa12.91□□□□□ -0.34
SNRNP70-203ENST00000544278 TDRG1Q3Y452 100 aa12.91□□□□□ -0.34
SNRNP70-203ENST00000544278 OR13D1Q8NGV5 346 aa12.91□□□□□ -0.34
SNRNP70-203ENST00000544278 FUT9Q9Y231 359 aa12.91□□□□□ -0.34
SNRNP70-203ENST00000544278 IGLV3-9A0A075B6K5 115 aa12.9□□□□□ -0.34
SNRNP70-203ENST00000544278 H7BYZ3 331 aa12.9□□□□□ -0.34
SNRNP70-203ENST00000544278 DVL1O14640 695 aa12.9□□□□□ -0.34
SNRNP70-203ENST00000544278 VDAC2P45880 294 aaPredicted RBP12.9□□□□□ -0.34
SNRNP70-203ENST00000544278 GNB2P62879 340 aa12.9□□□□□ -0.34
SNRNP70-203ENST00000544278 STUMQ69YW2 141 aa12.9□□□□□ -0.34
SNRNP70-203ENST00000544278 CIB3Q96Q77 187 aaPredicted RBP12.9□□□□□ -0.34
SNRNP70-203ENST00000544278 GGTLC1Q9BX51 225 aa12.9□□□□□ -0.34
SNRNP70-203ENST00000544278 SLC35D1Q9NTN3 355 aa12.9□□□□□ -0.34
SNRNP70-203ENST00000544278 WDR83OSQ9Y284 106 aa12.9□□□□□ -0.34
SNRNP70-203ENST00000544278 DPPA3Q6W0C5 159 aa12.9□□□□□ -0.34
SNRNP70-203ENST00000544278 SAP30LQ9HAJ7 183 aa12.9□□□□□ -0.34
SNRNP70-203ENST00000544278 IDI2-AS1Q9NZ38 188 aa12.9□□□□□ -0.34
SNRNP70-203ENST00000544278 SLC25A10Q9UBX3 287 aaPredicted RBP12.9□□□□□ -0.34
SNRNP70-203ENST00000544278 FAM90A27PA6NNH2 459 aa12.9□□□□□ -0.34
SNRNP70-203ENST00000544278 SIAH2O43255 324 aa12.9□□□□□ -0.34
SNRNP70-203ENST00000544278 CT45A6P0DMU7 189 aa12.9□□□□□ -0.34
SNRNP70-203ENST00000544278 CT45A5P0DMU8 189 aa12.9□□□□□ -0.34
SNRNP70-203ENST00000544278 CT45A7P0DMV0 189 aa12.9□□□□□ -0.34
SNRNP70-203ENST00000544278 NPY1RP25929 384 aa12.9□□□□□ -0.34
SNRNP70-203ENST00000544278 TMEM108Q6UXF1 575 aa12.9□□□□□ -0.34
SNRNP70-203ENST00000544278 OR4P4Q8NGL7 312 aa12.9□□□□□ -0.34
SNRNP70-203ENST00000544278 ACY3Q96HD9 319 aa12.9□□□□□ -0.34
SNRNP70-203ENST00000544278 RITA1Q96K30 269 aa12.9□□□□□ -0.34
SNRNP70-203ENST00000544278 TRGV8A0A0C4DH27 118 aa12.89□□□□□ -0.35
SNRNP70-203ENST00000544278 GALR1P47211 349 aa12.89□□□□□ -0.35
SNRNP70-203ENST00000544278 FAM78BQ5VT40 261 aa12.89□□□□□ -0.35
SNRNP70-203ENST00000544278 OR4S2Q8NH73 311 aa12.89□□□□□ -0.35
SNRNP70-203ENST00000544278 OR9G1Q8NH87 305 aa12.89□□□□□ -0.35
SNRNP70-203ENST00000544278 OR51B2Q9Y5P1 312 aa12.89□□□□□ -0.35
SNRNP70-203ENST00000544278 TRBV20OR9-2A0A075B6H5 130 aa12.89□□□□□ -0.35
SNRNP70-203ENST00000544278 J3QR06 171 aa12.89□□□□□ -0.35
SNRNP70-203ENST00000544278 F2RL2O00254 374 aa12.89□□□□□ -0.35
SNRNP70-203ENST00000544278 ENSAO43768 121 aaKnown RBP12.89□□□□□ -0.35
SNRNP70-203ENST00000544278 SSBP2P81877 361 aaPredicted RBP12.89□□□□□ -0.35
SNRNP70-203ENST00000544278 ACOT6Q3I5F7 207 aaPredicted RBP12.89□□□□□ -0.35
SNRNP70-203ENST00000544278 BEND2Q8NDZ0 799 aa12.89□□□□□ -0.35
SNRNP70-203ENST00000544278 SLC24A4Q8NFF2 622 aa12.89□□□□□ -0.35
SNRNP70-203ENST00000544278 ENY2Q9NPA8 101 aa12.89□□□□□ -0.35
SNRNP70-203ENST00000544278 TPSG1Q9NRR2 321 aa12.89□□□□□ -0.35
SNRNP70-203ENST00000544278 NAT8Q9UHE5 227 aa12.89□□□□□ -0.35
SNRNP70-203ENST00000544278 KBTBD11O94819 623 aa12.88□□□□□ -0.35
SNRNP70-203ENST00000544278 CRYABP02511 175 aaKnown RBP12.88□□□□□ -0.35
SNRNP70-203ENST00000544278 RPLP1P05386 114 aaKnown RBP12.88□□□□□ -0.35
SNRNP70-203ENST00000544278 FRMD6-AS1P0C7T7 363 aa12.88□□□□□ -0.35
SNRNP70-203ENST00000544278 CGB3P0DN86 165 aa12.88□□□□□ -0.35
SNRNP70-203ENST00000544278 CGB7P0DN87 165 aa12.88□□□□□ -0.35
SNRNP70-203ENST00000544278 Q6ZVH6 145 aa12.88□□□□□ -0.35
SNRNP70-203ENST00000544278 MIR17HGQ75NE6 70 aa12.88□□□□□ -0.35
SNRNP70-203ENST00000544278 OR10A7Q8NGE5 316 aa12.88□□□□□ -0.35
SNRNP70-203ENST00000544278 SMDT1Q9H4I9 107 aa12.88□□□□□ -0.35
SNRNP70-203ENST00000544278 PAM16Q9Y3D7 125 aa12.88□□□□□ -0.35
SNRNP70-203ENST00000544278 CACNA1AO00555 2505 aa12.88□□□□□ -0.35
SNRNP70-203ENST00000544278 CEACAM8P31997 349 aaPredicted RBP12.88□□□□□ -0.35
SNRNP70-203ENST00000544278 SLC35B1P78383 322 aa12.88□□□□□ -0.35
SNRNP70-203ENST00000544278 IGFL3Q6UXB1 125 aa12.88□□□□□ -0.35
SNRNP70-203ENST00000544278 STPG3Q8N7X2 389 aa12.88□□□□□ -0.35
SNRNP70-203ENST00000544278 OR2T6Q8NHC8 308 aa12.88□□□□□ -0.35
SNRNP70-203ENST00000544278 DYNLRB1Q9NP97 96 aa12.88□□□□□ -0.35
SNRNP70-203ENST00000544278 YTHDF2Q9Y5A9 579 aaKnown RBP12.88□□□□□ -0.35
SNRNP70-203ENST00000544278 A0A1W2PRD5 423 aa12.88□□□□□ -0.35
SNRNP70-203ENST00000544278 A0A1W2PRF3 423 aa12.88□□□□□ -0.35
SNRNP70-203ENST00000544278 A0A1W2PRM7 423 aa12.88□□□□□ -0.35
SNRNP70-203ENST00000544278 IL6RP08887 468 aaPredicted RBP12.88□□□□□ -0.35
SNRNP70-203ENST00000544278 WNT2P09544 360 aa12.88□□□□□ -0.35
SNRNP70-203ENST00000544278 SAA1P0DJI8 122 aaPredicted RBP12.88□□□□□ -0.35
SNRNP70-203ENST00000544278 TIMP3P35625 211 aa12.88□□□□□ -0.35
SNRNP70-203ENST00000544278 ZNF788Q6ZQV5 615 aa12.88□□□□□ -0.35
SNRNP70-203ENST00000544278 DDB2Q92466 427 aa12.88□□□□□ -0.35
SNRNP70-203ENST00000544278 NEIL1Q96FI4 390 aaPredicted RBP12.88□□□□□ -0.35
SNRNP70-203ENST00000544278 SGK494Q96LW2 274 aa12.88□□□□□ -0.35
SNRNP70-203ENST00000544278 IGKV1OR2-108A0A075B7D4 117 aa12.87□□□□□ -0.35
SNRNP70-203ENST00000544278 C17orf112F2Z3M2 114 aa12.87□□□□□ -0.35
SNRNP70-203ENST00000544278 SLC17A3O00476 420 aa12.87□□□□□ -0.35
SNRNP70-203ENST00000544278 RBFOX2O43251 390 aaKnown RBP eCLIP12.87□□□□□ -0.359e-14■■■□□ 15.2
SNRNP70-203ENST00000544278 TNFSF4P23510 183 aa12.87□□□□□ -0.35
SNRNP70-203ENST00000544278 ERVFC1-1P60608 527 aa12.87□□□□□ -0.35
SNRNP70-203ENST00000544278 MZT1Q08AG7 82 aa12.87□□□□□ -0.35
SNRNP70-203ENST00000544278 SPACA3Q8IXA5 215 aa12.87□□□□□ -0.35
SNRNP70-203ENST00000544278 SFXN3Q9BWM7 321 aa12.87□□□□□ -0.35
SNRNP70-203ENST00000544278 IL19Q9UHD0 177 aa12.87□□□□□ -0.35
SNRNP70-203ENST00000544278 RAB4AP20338 218 aa12.87□□□□□ -0.35
SNRNP70-203ENST00000544278 ATP6V1FQ16864 119 aa12.87□□□□□ -0.35
SNRNP70-203ENST00000544278 NHLRC2Q8NBF2 726 aa12.87□□□□□ -0.35
SNRNP70-203ENST00000544278 TBX15Q96SF7 602 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms