RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 GGTLC3B5MD39 225 aa19.48■□□□□ 0.71
SHD-201ENST00000543264 MEOX1P50221 254 aa19.48■□□□□ 0.71
SHD-201ENST00000543264 C18orf32Q8TCD1 76 aa19.48■□□□□ 0.71
SHD-201ENST00000543264 FAM168AQ92567 244 aa19.48■□□□□ 0.71
SHD-201ENST00000543264 SIT1Q9Y3P8 196 aa19.48■□□□□ 0.71
SHD-201ENST00000543264 COL6A3P12111 3177 aa19.48■□□□□ 0.71
SHD-201ENST00000543264 PRDX2P32119 198 aa19.48■□□□□ 0.71
SHD-201ENST00000543264 KLF3P57682 345 aaPredicted RBP19.48■□□□□ 0.71
SHD-201ENST00000543264 C1orf229Q6ZS94 237 aaPredicted RBP19.48■□□□□ 0.71
SHD-201ENST00000543264 LEAP2Q969E1 77 aa19.48■□□□□ 0.71
SHD-201ENST00000543264 TIMM8AO60220 97 aaPredicted RBP19.47■□□□□ 0.71
SHD-201ENST00000543264 FABP6P51161 128 aa19.47■□□□□ 0.71
SHD-201ENST00000543264 RBX1P62877 108 aa19.47■□□□□ 0.71
SHD-201ENST00000543264 UBE2V1Q13404 147 aa19.47■□□□□ 0.71
SHD-201ENST00000543264 TNXAQ16473 311 aa19.47■□□□□ 0.71
SHD-201ENST00000543264 TECRQ9NZ01 308 aaKnown RBP19.47■□□□□ 0.71
SHD-201ENST00000543264 ABI3Q9P2A4 366 aa19.47■□□□□ 0.71
SHD-201ENST00000543264 IGHV1-2P23083 117 aa19.47■□□□□ 0.71
SHD-201ENST00000543264 HSPE1P61604 102 aaKnown RBP19.47■□□□□ 0.71
SHD-201ENST00000543264 Q56UQ5 140 aa19.47■□□□□ 0.71
SHD-201ENST00000543264 FAM90A1Q86YD7 464 aa19.47■□□□□ 0.71
SHD-201ENST00000543264 ZNF738Q8NE65 137 aa19.47■□□□□ 0.71
SHD-201ENST00000543264 COX11Q9Y6N1 276 aa19.47■□□□□ 0.71
SHD-201ENST00000543264 IZUMO1RA6ND01 250 aa19.46■□□□□ 0.71
SHD-201ENST00000543264 AGFG2O95081 481 aa19.46■□□□□ 0.71
SHD-201ENST00000543264 SELENOVP59797 346 aa19.46■□□□□ 0.71
SHD-201ENST00000543264 ARG2P78540 354 aa19.46■□□□□ 0.71
SHD-201ENST00000543264 TRAT1Q6PIZ9 186 aa19.46■□□□□ 0.71
SHD-201ENST00000543264 MRPS16Q9Y3D3 137 aaKnown RBP19.46■□□□□ 0.71
SHD-201ENST00000543264 UTF1Q5T230 341 aa19.46■□□□□ 0.71
SHD-201ENST00000543264 OR4A47Q6IF82 309 aa19.46■□□□□ 0.71
SHD-201ENST00000543264 LRRC29Q8WV35 223 aa19.46■□□□□ 0.71
SHD-201ENST00000543264 NEUROG1Q92886 237 aa19.46■□□□□ 0.71
SHD-201ENST00000543264 JPT1Q9UK76 154 aa19.46■□□□□ 0.71
SHD-201ENST00000543264 ARL2-SNX15V9GYD0 113 aa19.46■□□□□ 0.71
SHD-201ENST00000543264 HSBP1O75506 76 aa19.45■□□□□ 0.7
SHD-201ENST00000543264 PPOXP50336 477 aa19.45■□□□□ 0.7
SHD-201ENST00000543264 PMCHL1Q16048 86 aa19.45■□□□□ 0.7
SHD-201ENST00000543264 ANKRD39Q53RE8 183 aa19.45■□□□□ 0.7
SHD-201ENST00000543264 CORO2AQ92828 525 aa19.45■□□□□ 0.7
SHD-201ENST00000543264 IFI27L2Q9H2X8 130 aa19.45■□□□□ 0.7
SHD-201ENST00000543264 DUSP13Q9UII6 198 aa19.45■□□□□ 0.7
SHD-201ENST00000543264 OR4S2Q8NH73 311 aa19.45■□□□□ 0.7
SHD-201ENST00000543264 MAFAQ8NHW3 353 aaPredicted RBP19.45■□□□□ 0.7
SHD-201ENST00000543264 LINC00479Q96M42 142 aa19.45■□□□□ 0.7
SHD-201ENST00000543264 TNCP24821 2201 aa19.44■□□□□ 0.7
SHD-201ENST00000543264 TMEM105Q8N8V8 129 aa19.44■□□□□ 0.7
SHD-201ENST00000543264 C22orf15Q8WYQ4 148 aa19.44■□□□□ 0.7
SHD-201ENST00000543264 IGF2BP2-AS1Q96M15 143 aa19.44■□□□□ 0.7
SHD-201ENST00000543264 IGKV1OR2-108A0A075B7D4 117 aa19.43■□□□□ 0.7
SHD-201ENST00000543264 IGHV2-26A0A0B4J1V2 119 aa19.43■□□□□ 0.7
SHD-201ENST00000543264 M0R2Z0 102 aa19.43■□□□□ 0.7
SHD-201ENST00000543264 EBLN2Q6P2I7 272 aa19.43■□□□□ 0.7
SHD-201ENST00000543264 SPACA3Q8IXA5 215 aa19.43■□□□□ 0.7
SHD-201ENST00000543264 LYG1Q8N1E2 194 aa19.43■□□□□ 0.7
SHD-201ENST00000543264 MRPL27Q9P0M9 148 aaKnown RBP19.43■□□□□ 0.7
SHD-201ENST00000543264 MFAP2P55001 183 aa19.43■□□□□ 0.7
SHD-201ENST00000543264 LOXL3P58215 753 aa19.43■□□□□ 0.7
SHD-201ENST00000543264 TMEM14BQ9NUH8 114 aa19.43■□□□□ 0.7
SHD-201ENST00000543264 TRAV9-2A0A087WT02 112 aa19.42■□□□□ 0.7
SHD-201ENST00000543264 TOMM40O96008 361 aa19.42■□□□□ 0.7
SHD-201ENST00000543264 DDB2Q92466 427 aa19.42■□□□□ 0.7
SHD-201ENST00000543264 FOXA2Q9Y261 457 aaPredicted RBP19.42■□□□□ 0.7
SHD-201ENST00000543264 FAM181BA6NEQ2 426 aa19.42■□□□□ 0.7
SHD-201ENST00000543264 IGLL1P15814 213 aa19.42■□□□□ 0.7
SHD-201ENST00000543264 GPR6P46095 362 aaPredicted RBP19.42■□□□□ 0.7
SHD-201ENST00000543264 MLANAQ16655 118 aa19.42■□□□□ 0.7
SHD-201ENST00000543264 GAL3ST2Q9H3Q3 398 aa19.42■□□□□ 0.7
SHD-201ENST00000543264 ZNF355PQ9NSJ1 428 aa19.42■□□□□ 0.7
SHD-201ENST00000543264 KIR2DS2P43631 304 aa19.41■□□□□ 0.7
SHD-201ENST00000543264 SPRR3Q9UBC9 169 aa19.41■□□□□ 0.7
SHD-201ENST00000543264 OR51B2Q9Y5P1 312 aa19.41■□□□□ 0.7
SHD-201ENST00000543264 RPL8P62917 257 aaKnown RBP19.41■□□□□ 0.7
SHD-201ENST00000543264 RNASEKQ6P5S7 137 aaKnown RBP19.41■□□□□ 0.7
SHD-201ENST00000543264 ALKBH7Q9BT30 221 aaPredicted RBP19.41■□□□□ 0.7
SHD-201ENST00000543264 IDI2-AS1Q9NZ38 188 aa19.41■□□□□ 0.7
SHD-201ENST00000543264 CLCF1Q9UBD9 225 aa19.41■□□□□ 0.7
SHD-201ENST00000543264 IGKV1D-17A0A075B6S4 117 aa19.4■□□□□ 0.7
SHD-201ENST00000543264 IGHV3OR15-7A0A075B7D8 119 aa19.4■□□□□ 0.7
SHD-201ENST00000543264 TAS2R45P59539 299 aa19.4■□□□□ 0.7
SHD-201ENST00000543264 GDF5OSQ5U4N7 250 aa19.4■□□□□ 0.7
SHD-201ENST00000543264 ZNRF1Q8ND25 227 aa19.4■□□□□ 0.7
SHD-201ENST00000543264 OR5B3Q8NH48 314 aa19.4■□□□□ 0.7
SHD-201ENST00000543264 LOC105371242A0A075B767 164 aa19.4■□□□□ 0.7
SHD-201ENST00000543264 IGHV2OR16-5A0A0B4J2B6 119 aa19.39■□□□□ 0.7
SHD-201ENST00000543264 PRR31Q5SQ13 230 aa19.39■□□□□ 0.7
SHD-201ENST00000543264 INO80CQ6PI98 192 aaPredicted RBP19.39■□□□□ 0.7
SHD-201ENST00000543264 SSBP4Q9BWG4 385 aaPredicted RBP19.39■□□□□ 0.7
SHD-201ENST00000543264 TRAV5A0A0B4J249 113 aa19.39■□□□□ 0.69
SHD-201ENST00000543264 A0A1W2PRE2 83 aa19.39■□□□□ 0.69
SHD-201ENST00000543264 KLRC4-KLRK1H3BQV0 150 aa19.39■□□□□ 0.69
SHD-201ENST00000543264 J3QR06 171 aa19.39■□□□□ 0.69
SHD-201ENST00000543264 CEACAM8P31997 349 aaPredicted RBP19.39■□□□□ 0.69
SHD-201ENST00000543264 FBLN7Q53RD9 439 aa19.39■□□□□ 0.69
SHD-201ENST00000543264 OR4F17Q8NGA8 305 aa19.39■□□□□ 0.69
SHD-201ENST00000543264 TDHQ8IZJ6 230 aa19.39■□□□□ 0.69
SHD-201ENST00000543264 OR9G1Q8NH87 305 aa19.39■□□□□ 0.69
SHD-201ENST00000543264 TRIB1Q96RU8 372 aa19.39■□□□□ 0.69
SHD-201ENST00000543264 TNFRSF19Q9NS68 423 aa19.39■□□□□ 0.69
SHD-201ENST00000543264 HEATR1Q9H583 2144 aaKnown RBP19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms