RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 SRD5A2P31213 254 aa9.43□□□□□ -0.9
CDH4-201ENST00000543233 RPS16P62249 146 aaKnown RBP9.43□□□□□ -0.9
CDH4-201ENST00000543233 C10orf128Q5T292 105 aa9.43□□□□□ -0.9
CDH4-201ENST00000543233 BORCS8Q96FH0 119 aa9.43□□□□□ -0.9
CDH4-201ENST00000543233 TMEM70Q9BUB7 260 aa9.43□□□□□ -0.9
CDH4-201ENST00000543233 COMMD5Q9GZQ3 224 aa9.43□□□□□ -0.9
CDH4-201ENST00000543233 PSENENQ9NZ42 101 aa9.43□□□□□ -0.9
CDH4-201ENST00000543233 ROS1P08922 2347 aa9.43□□□□□ -0.9
CDH4-201ENST00000543233 MGAQ8IWI9 3026 aa9.43□□□□□ -0.9
CDH4-201ENST00000543233 TSPAN13O95857 204 aa9.42□□□□□ -0.9
CDH4-201ENST00000543233 FAM87AP0C7U9 286 aa9.42□□□□□ -0.9
CDH4-201ENST00000543233 ARL16Q0P5N6 197 aa9.42□□□□□ -0.9
CDH4-201ENST00000543233 TMEM97Q5BJF2 176 aa9.42□□□□□ -0.9
CDH4-201ENST00000543233 ACSM6Q6P461 480 aa9.42□□□□□ -0.9
CDH4-201ENST00000543233 CRIP3Q6Q6R5 217 aa9.42□□□□□ -0.9
CDH4-201ENST00000543233 FA2HQ7L5A8 372 aa9.42□□□□□ -0.9
CDH4-201ENST00000543233 ZNF525Q8N782 197 aa9.42□□□□□ -0.9
CDH4-201ENST00000543233 ANAPC13Q9BS18 74 aa9.42□□□□□ -0.9
CDH4-201ENST00000543233 TMEM222Q9H0R3 208 aa9.42□□□□□ -0.9
CDH4-201ENST00000543233 OR1A1Q9P1Q5 309 aa9.42□□□□□ -0.9
CDH4-201ENST00000543233 UFC1Q9Y3C8 167 aa9.42□□□□□ -0.9
CDH4-201ENST00000543233 ATMQ13315 3056 aa9.42□□□□□ -0.9
CDH4-201ENST00000543233 IGKV1-27A0A075B6S5 117 aa9.42□□□□□ -0.9
CDH4-201ENST00000543233 MAGEA5P43359 124 aa9.42□□□□□ -0.9
CDH4-201ENST00000543233 PLGLB1Q02325 96 aa9.42□□□□□ -0.9
CDH4-201ENST00000543233 ABHD17BQ5VST6 288 aa9.42□□□□□ -0.9
CDH4-201ENST00000543233 FAM27BQ5VT28 67 aa9.42□□□□□ -0.9
CDH4-201ENST00000543233 INO80CQ6PI98 192 aaPredicted RBP9.42□□□□□ -0.9
CDH4-201ENST00000543233 OCC1Q8TAD7 63 aa9.42□□□□□ -0.9
CDH4-201ENST00000543233 VSTM2AQ8TAG5 236 aa9.42□□□□□ -0.9
CDH4-201ENST00000543233 FAM110AQ9BQ89 295 aa9.42□□□□□ -0.9
CDH4-201ENST00000543233 TECRQ9NZ01 308 aaKnown RBP9.42□□□□□ -0.9
CDH4-201ENST00000543233 ZNF716A6NP11 495 aa9.42□□□□□ -0.9
CDH4-201ENST00000543233 FKBP2P26885 142 aaKnown RBP9.42□□□□□ -0.9
CDH4-201ENST00000543233 PAX9P55771 341 aa9.42□□□□□ -0.9
CDH4-201ENST00000543233 KIR3DS1Q14943 382 aa9.42□□□□□ -0.9
CDH4-201ENST00000543233 TAF15Q92804 592 aaKnown RBP eCLIP9.42□□□□□ -0.9
CDH4-201ENST00000543233 STRADBQ9C0K7 418 aa9.42□□□□□ -0.9
CDH4-201ENST00000543233 SH2D2AQ9NP31 389 aa9.42□□□□□ -0.9
CDH4-201ENST00000543233 YAE1D1Q9NRH1 226 aa9.42□□□□□ -0.9
CDH4-201ENST00000543233 FBLN5Q9UBX5 448 aa9.42□□□□□ -0.9
CDH4-201ENST00000543233 TRAPPC2LQ9UL33 140 aa9.42□□□□□ -0.9
CDH4-201ENST00000543233 BOKQ9UMX3 212 aaPredicted RBP9.42□□□□□ -0.9
CDH4-201ENST00000543233 A0A1W2PNU3 283 aaPredicted RBP9.41□□□□□ -0.9
CDH4-201ENST00000543233 OR11H12B2RN74 326 aa9.41□□□□□ -0.9
CDH4-201ENST00000543233 MRPL33O75394 65 aaKnown RBP9.41□□□□□ -0.9
CDH4-201ENST00000543233 CCL1P22362 96 aa9.41□□□□□ -0.9
CDH4-201ENST00000543233 ATP5J2P56134 94 aa9.41□□□□□ -0.9
CDH4-201ENST00000543233 SSX8Q7RTT4 187 aa9.41□□□□□ -0.9
CDH4-201ENST00000543233 TUSC5Q8IXB3 177 aa9.41□□□□□ -0.9
CDH4-201ENST00000543233 OR11H1Q8NG94 326 aa9.41□□□□□ -0.9
CDH4-201ENST00000543233 OR11H2Q8NH07 326 aa9.41□□□□□ -0.9
CDH4-201ENST00000543233 C12orf49Q9H741 205 aa9.41□□□□□ -0.9
CDH4-201ENST00000543233 KBTBD11-OT1A0A1B0GTJ5 212 aa9.41□□□□□ -0.9
CDH4-201ENST00000543233 HELTA6NFD8 242 aa9.41□□□□□ -0.9
CDH4-201ENST00000543233 OR7C1O76099 320 aaPredicted RBP9.41□□□□□ -0.9
CDH4-201ENST00000543233 LGALS4P56470 323 aa9.41□□□□□ -0.9
CDH4-201ENST00000543233 SEC11AP67812 179 aa9.41□□□□□ -0.9
CDH4-201ENST00000543233 ID3Q02535 119 aa9.41□□□□□ -0.9
CDH4-201ENST00000543233 FXYD3Q14802 87 aa9.41□□□□□ -0.9
CDH4-201ENST00000543233 LRRC75BQ2VPJ9 315 aa9.41□□□□□ -0.9
CDH4-201ENST00000543233 ZDHHC23Q8IYP9 409 aa9.41□□□□□ -0.9
CDH4-201ENST00000543233 PP6455Q8WZ26 134 aa9.41□□□□□ -0.9
CDH4-201ENST00000543233 OR2D2Q9H210 308 aa9.41□□□□□ -0.9
CDH4-201ENST00000543233 HEATR1Q9H583 2144 aaKnown RBP9.41□□□□□ -0.9
CDH4-201ENST00000543233 SAA2-SAA4A0A096LPE2 208 aa9.4□□□□□ -0.9
CDH4-201ENST00000543233 SH2D7A6NKC9 451 aaPredicted RBP9.4□□□□□ -0.9
CDH4-201ENST00000543233 BMPR1BO00238 502 aa9.4□□□□□ -0.9
CDH4-201ENST00000543233 AGFG2O95081 481 aa9.4□□□□□ -0.9
CDH4-201ENST00000543233 SPINK8P0C7L1 97 aa9.4□□□□□ -0.9
CDH4-201ENST00000543233 RPL32P62910 135 aaKnown RBP9.4□□□□□ -0.9
CDH4-201ENST00000543233 COLCA1Q6ZS62 124 aa9.4□□□□□ -0.9
CDH4-201ENST00000543233 SFXN3Q9BWM7 321 aa9.4□□□□□ -0.9
CDH4-201ENST00000543233 JPT1Q9UK76 154 aa9.4□□□□□ -0.9
CDH4-201ENST00000543233 ESPL1Q14674 2120 aa9.4□□□□□ -0.9
CDH4-201ENST00000543233 DEGS1O15121 323 aa9.4□□□□□ -0.9
CDH4-201ENST00000543233 SYNGR3O43761 229 aa9.4□□□□□ -0.9
CDH4-201ENST00000543233 APCSP02743 223 aa9.4□□□□□ -0.9
CDH4-201ENST00000543233 CRYBB3P26998 211 aa9.4□□□□□ -0.9
CDH4-201ENST00000543233 TM4SF20Q53R12 229 aa9.4□□□□□ -0.9
CDH4-201ENST00000543233 GNB1LQ9BYB4 327 aa9.4□□□□□ -0.9
CDH4-201ENST00000543233 TMEM191AQ9H0A3 160 aa9.4□□□□□ -0.9
CDH4-201ENST00000543233 OTOGLQ3ZCN5 2332 aa9.4□□□□□ -0.91
CDH4-201ENST00000543233 TRBV20OR9-2A0A075B6H5 130 aa9.4□□□□□ -0.91
CDH4-201ENST00000543233 C5orf49A4QMS7 147 aa9.4□□□□□ -0.91
CDH4-201ENST00000543233 MT-ND6P03923 174 aa9.4□□□□□ -0.91
CDH4-201ENST00000543233 CFHR2P36980 270 aa9.4□□□□□ -0.91
CDH4-201ENST00000543233 TMPRSS3P57727 454 aa9.4□□□□□ -0.91
CDH4-201ENST00000543233 SLC38A11Q08AI6 406 aa9.4□□□□□ -0.91
CDH4-201ENST00000543233 OR2H1Q9GZK4 316 aa9.4□□□□□ -0.91
CDH4-201ENST00000543233 DEFB127Q9H1M4 99 aa9.4□□□□□ -0.91
CDH4-201ENST00000543233 ZNF442Q9H7R0 627 aa9.4□□□□□ -0.91
CDH4-201ENST00000543233 PIEZO2Q9H5I5 2752 aa9.4□□□□□ -0.91
CDH4-201ENST00000543233 CADP27708 2225 aa9.39□□□□□ -0.91
CDH4-201ENST00000543233 IGKV1-12A0A0C4DH73 117 aa9.39□□□□□ -0.91
CDH4-201ENST00000543233 SCO2A0A1W2PP80 73 aa9.39□□□□□ -0.91
CDH4-201ENST00000543233 H3BRM9 83 aa9.39□□□□□ -0.91
CDH4-201ENST00000543233 IGKV1D-12P01611 117 aa9.39□□□□□ -0.91
CDH4-201ENST00000543233 GAGE5Q13069 117 aa9.39□□□□□ -0.91
CDH4-201ENST00000543233 GAGE6Q13070 117 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms