RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 OR5H2Q8NGV7 314 aa4.06□□□□□ -1.76
CLIP1-217ENST00000543205 OR8U1Q8NH10 309 aa4.06□□□□□ -1.76
CLIP1-217ENST00000543205 TOLLIPQ9H0E2 274 aa4.06□□□□□ -1.76
CLIP1-217ENST00000543205 PARP12Q9H0J9 701 aaKnown RBP4.06□□□□□ -1.76
CLIP1-217ENST00000543205 IFI27L2Q9H2X8 130 aa4.06□□□□□ -1.76
CLIP1-217ENST00000543205 ESM1Q9NQ30 184 aa4.06□□□□□ -1.76
CLIP1-217ENST00000543205 SIGLEC8Q9NYZ4 499 aa4.06□□□□□ -1.76
CLIP1-217ENST00000543205 MMP24Q9Y5R2 645 aa4.06□□□□□ -1.76
CLIP1-217ENST00000543205 SAA2-SAA4A0A096LPE2 208 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 IGHV1-3A0A0C4DH29 117 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 ZNF736B4DX44 427 aaPredicted RBP4.05□□□□□ -1.76
CLIP1-217ENST00000543205 G3V4G9 280 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 GABARAPH6UMI1 98 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 J3QRK9 145 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 CRYBA1P05813 215 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 FAM106CPP0CH98 169 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 SAA2P0DJI9 122 aaPredicted RBP4.05□□□□□ -1.76
CLIP1-217ENST00000543205 OR5H8P0DN80 308 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 FCGR2CP31995 323 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 RFX2P48378 723 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 ZNF137PP52743 207 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 KRTAP10-2P60368 255 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 UBE2MP61081 183 aaKnown RBP4.05□□□□□ -1.76
CLIP1-217ENST00000543205 SSBP1Q04837 148 aaKnown RBP4.05□□□□□ -1.76
CLIP1-217ENST00000543205 DIAPH2-AS1Q14236 149 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 HES1Q14469 280 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 CNPY1Q3B7I2 92 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 PYDC2Q56P42 97 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 DRAM1Q8N682 238 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 TEX45Q8NA69 505 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 OR6Q1Q8NGQ2 317 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 RTN4IP1Q8WWV3 396 aaPredicted RBP4.05□□□□□ -1.76
CLIP1-217ENST00000543205 ABHD14BQ96IU4 210 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 AGMATQ9BSE5 352 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 ZNF747Q9BV97 191 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 CHIAQ9BZP6 476 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 OR2D2Q9H210 308 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 EHFQ9NZC4 300 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 KLK11Q9UBX7 282 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 VPREB3Q9UKI3 123 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 ANAPC10Q9UM13 185 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 OR2W1Q9Y3N9 320 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 IGHV3-72A0A0B4J1Y9 119 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 A0A1W2PPI3 338 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 LINC00473A8K010 186 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 SLC22A5O76082 557 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 TMEM50AO95807 157 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 IFNA6P05013 189 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 CD24P25063 80 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 G0S2P27469 103 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 HRH1P35367 487 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 TAS2R19P59542 299 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 ACTBL2Q562R1 376 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 RPL39P5Q59GN2 51 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 ZNF833PQ6ZTB9 187 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 ODF3L1Q8IXM7 274 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.05□□□□□ -1.76
CLIP1-217ENST00000543205 OR56B4Q8NH76 319 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 PIFOQ8TCI5 191 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 SMIM4Q8WVI0 70 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 TMEM158Q8WZ71 300 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 SOSTQ9BQB4 213 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 SRRQ9GZT4 340 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 TAS2R8Q9NYW2 309 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 MTFP1Q9UDX5 166 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 TCF19Q9Y242 345 aa4.05□□□□□ -1.76
CLIP1-217ENST00000543205 A6NDX4 124 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 M0R1X1 148 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 GSTZ1O43708 216 aaPredicted RBP4.04□□□□□ -1.76
CLIP1-217ENST00000543205 PPYP01298 95 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 IGKV1D-33P01593 117 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 IGKV1-33P01594 117 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 TBPP20226 339 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 AADACP22760 399 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 FXYD4P59646 89 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 HERV-K104P61576 105 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 MEF2DQ14814 521 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 RNASE10Q5GAN6 216 aaKnown RBP4.04□□□□□ -1.76
CLIP1-217ENST00000543205 DHRS11Q6UWP2 260 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 TMEM17Q86X19 198 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 TMEM219Q86XT9 240 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 ZNF645Q8N7E2 425 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 TMEM229BQ8NBD8 167 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 OR6F1Q8NGZ6 308 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 OR2T10Q8NGZ9 312 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 ENKURQ8TC29 256 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 SECTM1Q8WVN6 248 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 ZNF2Q9BSG1 426 aaPredicted RBP4.04□□□□□ -1.76
CLIP1-217ENST00000543205 MLST8Q9BVC4 326 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 MRPL20Q9BYC9 149 aaKnown RBP4.04□□□□□ -1.76
CLIP1-217ENST00000543205 BEX1Q9HBH7 125 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 SDHAF2Q9NX18 166 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 DKK2Q9UBU2 259 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 ZNF107Q9UII5 783 aaPredicted RBP4.04□□□□□ -1.76
CLIP1-217ENST00000543205 V9GYH0 126 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 IGKV1D-13A0A0B4J2D9 117 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 OR5H14A6NHG9 310 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 RNF212BA8MTL3 300 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 H7C2Y5 167 aa4.04□□□□□ -1.76
CLIP1-217ENST00000543205 RAB3DO95716 219 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms