RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 OR1P1Q8NH06 330 aa9.51□□□□□ -0.89
DDX55-210ENST00000543016 HIPK2Q9H2X6 1198 aa9.51□□□□□ -0.89
DDX55-210ENST00000543016 ZNF355PQ9NSJ1 428 aa9.51□□□□□ -0.89
DDX55-210ENST00000543016 FBN1P35555 2871 aaKnown RBP9.51□□□□□ -0.89
DDX55-210ENST00000543016 TRBV9A0A0B4J1U6 114 aa9.5□□□□□ -0.89
DDX55-210ENST00000543016 CEBPZOSA8MTT3 80 aa9.5□□□□□ -0.89
DDX55-210ENST00000543016 ADAP1O75689 374 aa9.5□□□□□ -0.89
DDX55-210ENST00000543016 TRGV3P03979 118 aa9.5□□□□□ -0.89
DDX55-210ENST00000543016 AREGP15514 252 aa9.5□□□□□ -0.89
DDX55-210ENST00000543016 HOXA1P49639 335 aaPredicted RBP9.5□□□□□ -0.89
DDX55-210ENST00000543016 KRTAP10-3P60369 221 aa9.5□□□□□ -0.89
DDX55-210ENST00000543016 RPL23AP62750 156 aaKnown RBP9.5□□□□□ -0.89
DDX55-210ENST00000543016 CYCSP99999 105 aaKnown RBP9.5□□□□□ -0.89
DDX55-210ENST00000543016 ID3Q02535 119 aa9.5□□□□□ -0.89
DDX55-210ENST00000543016 IAH1Q2TAA2 248 aaPredicted RBP9.5□□□□□ -0.89
DDX55-210ENST00000543016 TCTEX1D4Q5JR98 221 aa9.5□□□□□ -0.89
DDX55-210ENST00000543016 C10orf99Q6UWK7 81 aa9.5□□□□□ -0.89
DDX55-210ENST00000543016 GSG1LQ6UXU4 331 aa9.5□□□□□ -0.89
DDX55-210ENST00000543016 UXS1Q8NBZ7 420 aa9.5□□□□□ -0.89
DDX55-210ENST00000543016 OR10W1Q8NGF6 305 aa9.5□□□□□ -0.89
DDX55-210ENST00000543016 CIB3Q96Q77 187 aaPredicted RBP9.5□□□□□ -0.89
DDX55-210ENST00000543016 CITED2Q99967 270 aaPredicted RBP9.5□□□□□ -0.89
DDX55-210ENST00000543016 F11RQ9Y624 299 aaKnown RBP9.5□□□□□ -0.89
DDX55-210ENST00000543016 STAB1Q9NY15 2570 aa9.5□□□□□ -0.89
DDX55-210ENST00000543016 C5orf51A6NDU8 294 aa9.49□□□□□ -0.89
DDX55-210ENST00000543016 M0QZ24 198 aa9.49□□□□□ -0.89
DDX55-210ENST00000543016 CORTO00230 105 aa9.49□□□□□ -0.89
DDX55-210ENST00000543016 SSNA1O43805 119 aa9.49□□□□□ -0.89
DDX55-210ENST00000543016 RPLP1P05386 114 aaKnown RBP9.49□□□□□ -0.89
DDX55-210ENST00000543016 APELAP0DMC3 54 aa9.49□□□□□ -0.89
DDX55-210ENST00000543016 HTR2BP41595 481 aa9.49□□□□□ -0.89
DDX55-210ENST00000543016 TPPP2P59282 170 aa9.49□□□□□ -0.89
DDX55-210ENST00000543016 RUNX1Q01196 453 aa9.49□□□□□ -0.89
DDX55-210ENST00000543016 C2orf68Q2NKX9 166 aa9.49□□□□□ -0.89
DDX55-210ENST00000543016 ZNF491Q8N8L2 437 aa9.49□□□□□ -0.89
DDX55-210ENST00000543016 C2orf50Q96LR7 162 aa9.49□□□□□ -0.89
DDX55-210ENST00000543016 ATP6V0BQ99437 205 aa9.49□□□□□ -0.89
DDX55-210ENST00000543016 KLK15Q9H2R5 256 aa9.49□□□□□ -0.89
DDX55-210ENST00000543016 HEYLQ9NQ87 328 aaPredicted RBP9.49□□□□□ -0.89
DDX55-210ENST00000543016 U3KQ87 197 aa9.49□□□□□ -0.89
DDX55-210ENST00000543016 IGLV11-55A0A075B6I3 123 aa9.48□□□□□ -0.89
DDX55-210ENST00000543016 C13orf42A0A1B0GVH6 325 aa9.48□□□□□ -0.89
DDX55-210ENST00000543016 SYNGR2O43760 224 aa9.48□□□□□ -0.89
DDX55-210ENST00000543016 NKX2-1P43699 371 aaPredicted RBP9.48□□□□□ -0.89
DDX55-210ENST00000543016 RPP30P78346 268 aaKnown RBP9.48□□□□□ -0.89
DDX55-210ENST00000543016 RHOGP84095 191 aa9.48□□□□□ -0.89
DDX55-210ENST00000543016 ATP5G2Q06055 141 aa9.48□□□□□ -0.89
DDX55-210ENST00000543016 KIAA0141Q14154 515 aaPredicted RBP9.48□□□□□ -0.89
DDX55-210ENST00000543016 KHDC1LQ5JSQ8 128 aa9.48□□□□□ -0.89
DDX55-210ENST00000543016 C11orf44Q8N8P7 122 aa9.48□□□□□ -0.89
DDX55-210ENST00000543016 ZBTB8BQ8NAP8 495 aaPredicted RBP9.48□□□□□ -0.89
DDX55-210ENST00000543016 OR4F17Q8NGA8 305 aa9.48□□□□□ -0.89
DDX55-210ENST00000543016 OR4D5Q8NGN0 318 aa9.48□□□□□ -0.89
DDX55-210ENST00000543016 DTD1Q8TEA8 209 aa9.48□□□□□ -0.89
DDX55-210ENST00000543016 C4orf3Q8WVX3 66 aa9.48□□□□□ -0.89
DDX55-210ENST00000543016 CXorf58Q96LI9 332 aa9.48□□□□□ -0.89
DDX55-210ENST00000543016 MS4A10Q96PG2 267 aa9.48□□□□□ -0.89
DDX55-210ENST00000543016 FANCD2OSQ96PS1 177 aa9.48□□□□□ -0.89
DDX55-210ENST00000543016 OR4F4Q96R69 305 aa9.48□□□□□ -0.89
DDX55-210ENST00000543016 FAM25EA8MYX2 175 aa9.47□□□□□ -0.89
DDX55-210ENST00000543016 WRBO00258 174 aa9.47□□□□□ -0.89
DDX55-210ENST00000543016 BSXQ3C1V8 233 aa9.47□□□□□ -0.89
DDX55-210ENST00000543016 PVRIGQ6DKI7 326 aa9.47□□□□□ -0.89
DDX55-210ENST00000543016 SLC25A24Q6NUK1 477 aa9.47□□□□□ -0.89
DDX55-210ENST00000543016 VN1R17PQ8TDU5 208 aa9.47□□□□□ -0.89
DDX55-210ENST00000543016 OR10C1Q96KK4 312 aa9.47□□□□□ -0.89
DDX55-210ENST00000543016 RAB40CQ96S21 281 aa9.47□□□□□ -0.89
DDX55-210ENST00000543016 P2RX4Q99571 388 aa9.47□□□□□ -0.89
DDX55-210ENST00000543016 RBKSQ9H477 322 aa9.47□□□□□ -0.89
DDX55-210ENST00000543016 GAR1Q9NY12 217 aaKnown RBP9.47□□□□□ -0.89
DDX55-210ENST00000543016 GSKIPQ9P0R6 139 aa9.47□□□□□ -0.89
DDX55-210ENST00000543016 FBXL7Q9UJT9 491 aa9.47□□□□□ -0.89
DDX55-210ENST00000543016 ALG5Q9Y673 324 aa9.47□□□□□ -0.89
DDX55-210ENST00000543016 TRBV7-1A0A0A6YYK4 115 aa9.46□□□□□ -0.9
DDX55-210ENST00000543016 ADARB2-AS1A8MUL3 147 aa9.46□□□□□ -0.9
DDX55-210ENST00000543016 MPTX1A8MV57 137 aa9.46□□□□□ -0.9
DDX55-210ENST00000543016 NUDT19A8MXV4 375 aa9.46□□□□□ -0.9
DDX55-210ENST00000543016 OR2J3O76001 311 aa9.46□□□□□ -0.9
DDX55-210ENST00000543016 REG1AP05451 166 aa9.46□□□□□ -0.9
DDX55-210ENST00000543016 LGALS1P09382 135 aaKnown RBP9.46□□□□□ -0.9
DDX55-210ENST00000543016 RNASE2P10153 161 aaKnown RBP9.46□□□□□ -0.9
DDX55-210ENST00000543016 TAS2R30P59541 319 aa9.46□□□□□ -0.9
DDX55-210ENST00000543016 SRSF4Q08170 494 aaKnown RBP9.46□□□□□ -0.9
DDX55-210ENST00000543016 EXOSC2Q13868 293 aaKnown RBP9.46□□□□□ -0.9
DDX55-210ENST00000543016 C15orf32Q32M92 178 aa9.46□□□□□ -0.9
DDX55-210ENST00000543016 C2orf83Q53S99 150 aa9.46□□□□□ -0.9
DDX55-210ENST00000543016 SLC24A4Q8NFF2 622 aa9.46□□□□□ -0.9
DDX55-210ENST00000543016 RNASEH2CQ8TDP1 164 aaKnown RBP9.46□□□□□ -0.9
DDX55-210ENST00000543016 ASB13Q8WXK3 278 aa9.46□□□□□ -0.9
DDX55-210ENST00000543016 EEF1AKMT3Q96AZ1 226 aa9.46□□□□□ -0.9
DDX55-210ENST00000543016 NMES1Q9C002 83 aa9.46□□□□□ -0.9
DDX55-210ENST00000543016 MED28Q9H204 178 aa9.46□□□□□ -0.9
DDX55-210ENST00000543016 TET2Q6N021 2002 aaPredicted RBP9.46□□□□□ -0.9
DDX55-210ENST00000543016 RPS10-NUDT3A0A1W2PQS6 291 aa9.45□□□□□ -0.9
DDX55-210ENST00000543016 GOSR2O14653 212 aa9.45□□□□□ -0.9
DDX55-210ENST00000543016 PRH1P02810 166 aa9.45□□□□□ -0.9
DDX55-210ENST00000543016 NPY1RP25929 384 aa9.45□□□□□ -0.9
DDX55-210ENST00000543016 MYCNOSP40205 109 aa9.45□□□□□ -0.9
DDX55-210ENST00000543016 RAB11AP62491 216 aa9.45□□□□□ -0.9
DDX55-210ENST00000543016 IL15RAQ13261 267 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms