RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 YPEL1O60688 119 aa11.01□□□□□ -0.65
TNC-212ENST00000542877 FAM19A2Q8N3H0 131 aa11.01□□□□□ -0.65
TNC-212ENST00000542877 YPEL2Q96QA6 119 aa11.01□□□□□ -0.65
TNC-212ENST00000542877 SCGB3A1Q96QR1 104 aa11.01□□□□□ -0.65
TNC-212ENST00000542877 Q9H3A6 140 aa11.01□□□□□ -0.65
TNC-212ENST00000542877 IGLV3-12A0A075B6K2 115 aa11.01□□□□□ -0.65
TNC-212ENST00000542877 HIGD1CA8MV81 97 aa11.01□□□□□ -0.65
TNC-212ENST00000542877 DNAL4O96015 105 aa11.01□□□□□ -0.65
TNC-212ENST00000542877 GCSAMLQ5JQS6 135 aa11.01□□□□□ -0.65
TNC-212ENST00000542877 PAQR4Q8N4S7 273 aaPredicted RBP11.01□□□□□ -0.65
TNC-212ENST00000542877 FDCSPQ8NFU4 85 aa11.01□□□□□ -0.65
TNC-212ENST00000542877 BEX4Q9NWD9 120 aaPredicted RBP11.01□□□□□ -0.65
TNC-212ENST00000542877 PRR32B1ATL7 298 aa11.01□□□□□ -0.65
TNC-212ENST00000542877 FOXC2Q99958 501 aa11.01□□□□□ -0.65
TNC-212ENST00000542877 MRPL20Q9BYC9 149 aaKnown RBP11.01□□□□□ -0.65
TNC-212ENST00000542877 OSTCQ9NRP0 149 aa11.01□□□□□ -0.65
TNC-212ENST00000542877 FBXL7Q9UJT9 491 aa11.01□□□□□ -0.65
TNC-212ENST00000542877 LAMTOR2Q9Y2Q5 125 aa11.01□□□□□ -0.65
TNC-212ENST00000542877 UPK2O00526 184 aa11.01□□□□□ -0.65
TNC-212ENST00000542877 COX6B1P14854 86 aa11.01□□□□□ -0.65
TNC-212ENST00000542877 GFI1Q99684 422 aa11.01□□□□□ -0.65
TNC-212ENST00000542877 OTORQ9NRC9 128 aa11.01□□□□□ -0.65
TNC-212ENST00000542877 NRXN2Q9P2S2 1712 aa11□□□□□ -0.65
TNC-212ENST00000542877 IGLV3-32A0A0A0MS00 114 aa11□□□□□ -0.65
TNC-212ENST00000542877 A0A1B0GV72 72 aa11□□□□□ -0.65
TNC-212ENST00000542877 TRGV3P03979 118 aa11□□□□□ -0.65
TNC-212ENST00000542877 GPR183P32249 361 aa11□□□□□ -0.65
TNC-212ENST00000542877 GAS1P54826 345 aa11□□□□□ -0.65
TNC-212ENST00000542877 MRPL14Q6P1L8 145 aaKnown RBP11□□□□□ -0.65
TNC-212ENST00000542877 FER1L6-AS1Q8NA97 138 aa11□□□□□ -0.65
TNC-212ENST00000542877 LYZL4Q96KX0 146 aa11□□□□□ -0.65
TNC-212ENST00000542877 ASXL3Q9C0F0 2248 aa11□□□□□ -0.65
TNC-212ENST00000542877 M0R381 172 aa11□□□□□ -0.65
TNC-212ENST00000542877 GDF15Q99988 308 aa11□□□□□ -0.65
TNC-212ENST00000542877 DCTN5Q9BTE1 182 aa11□□□□□ -0.65
TNC-212ENST00000542877 SCN10AQ9Y5Y9 1956 aa11□□□□□ -0.65
TNC-212ENST00000542877 HIST1H2BKO60814 126 aa11□□□□□ -0.65
TNC-212ENST00000542877 HIST1H2BJP06899 126 aa11□□□□□ -0.65
TNC-212ENST00000542877 ZNF883P0CG24 379 aa11□□□□□ -0.65
TNC-212ENST00000542877 HIST1H2BOP23527 126 aa11□□□□□ -0.65
TNC-212ENST00000542877 HIST1H2BBP33778 126 aa11□□□□□ -0.65
TNC-212ENST00000542877 ADMP35318 185 aa11□□□□□ -0.65
TNC-212ENST00000542877 HIST1H2BDP58876 126 aa11□□□□□ -0.65
TNC-212ENST00000542877 HIST1H2BCP62807 126 aa11□□□□□ -0.65
TNC-212ENST00000542877 HIST2H2BEQ16778 126 aa11□□□□□ -0.65
TNC-212ENST00000542877 HIST2H2BFQ5QNW6 126 aaPredicted RBP11□□□□□ -0.65
TNC-212ENST00000542877 HIST1H2BHQ93079 126 aa11□□□□□ -0.65
TNC-212ENST00000542877 ST6GALNAC6Q969X2 333 aa11□□□□□ -0.65
TNC-212ENST00000542877 HIST1H2BNQ99877 126 aa11□□□□□ -0.65
TNC-212ENST00000542877 HIST1H2BMQ99879 126 aa11□□□□□ -0.65
TNC-212ENST00000542877 CHODLQ9H9P2 273 aa11□□□□□ -0.65
TNC-212ENST00000542877 SVILO95425 2214 aa11□□□□□ -0.65
TNC-212ENST00000542877 TDRD6O60522 2096 aaKnown RBP11□□□□□ -0.65
TNC-212ENST00000542877 C15orf61A6NNL5 157 aa11□□□□□ -0.65
TNC-212ENST00000542877 STAG3L3P0CL85 134 aa11□□□□□ -0.65
TNC-212ENST00000542877 SUMO2P61956 95 aaKnown RBP11□□□□□ -0.65
TNC-212ENST00000542877 ZNF497Q6ZNH5 498 aa11□□□□□ -0.65
TNC-212ENST00000542877 MBD3L1Q8WWY6 194 aa11□□□□□ -0.65
TNC-212ENST00000542877 A0A1B0GWB2 263 aa10.99□□□□□ -0.65
TNC-212ENST00000542877 IGHV1-2P23083 117 aa10.99□□□□□ -0.65
TNC-212ENST00000542877 SPCS1Q9Y6A9 102 aa10.99□□□□□ -0.65
TNC-212ENST00000542877 GREB1LQ9C091 1923 aaPredicted RBP10.99□□□□□ -0.65
TNC-212ENST00000542877 C1QTNF9P0C862 333 aa10.99□□□□□ -0.65
TNC-212ENST00000542877 TMEM242Q9NWH2 141 aa10.99□□□□□ -0.65
TNC-212ENST00000542877 JKAMPQ9P055 326 aa10.99□□□□□ -0.65
TNC-212ENST00000542877 TNS1Q9HBL0 1735 aaKnown RBP10.99□□□□□ -0.65
TNC-212ENST00000542877 IGHV3OR16-13A0A075B7E8 117 aa10.99□□□□□ -0.65
TNC-212ENST00000542877 IGHV3-74A0A0B4J1X5 117 aa10.99□□□□□ -0.65
TNC-212ENST00000542877 A0A0G2JMM0 328 aa10.99□□□□□ -0.65
TNC-212ENST00000542877 A0A1W2PPB8 328 aa10.99□□□□□ -0.65
TNC-212ENST00000542877 A0A1W2PRE2 83 aa10.99□□□□□ -0.65
TNC-212ENST00000542877 A0A1W2PRS3 328 aa10.99□□□□□ -0.65
TNC-212ENST00000542877 KIR3DP1A8MWS1 328 aa10.99□□□□□ -0.65
TNC-212ENST00000542877 GATA2P23769 480 aaPredicted RBP10.99□□□□□ -0.65
TNC-212ENST00000542877 HEPN1Q6WQI6 88 aa10.99□□□□□ -0.65
TNC-212ENST00000542877 FAM181BA6NEQ2 426 aa10.99□□□□□ -0.65
TNC-212ENST00000542877 SNAI2O43623 268 aa10.99□□□□□ -0.65
TNC-212ENST00000542877 CD5P06127 495 aa10.99□□□□□ -0.65
TNC-212ENST00000542877 MRAP2Q96G30 205 aa10.99□□□□□ -0.65
TNC-212ENST00000542877 ALKBH7Q9BT30 221 aaPredicted RBP10.99□□□□□ -0.65
TNC-212ENST00000542877 A0A087WV48 116 aa10.98□□□□□ -0.65
TNC-212ENST00000542877 FAM90A9PA6NNJ1 464 aa10.98□□□□□ -0.65
TNC-212ENST00000542877 IGKV1D-33P01593 117 aa10.98□□□□□ -0.65
TNC-212ENST00000542877 IGKV1-33P01594 117 aa10.98□□□□□ -0.65
TNC-212ENST00000542877 SAA1P0DJI8 122 aaPredicted RBP10.98□□□□□ -0.65
TNC-212ENST00000542877 FAM27E3Q08E93 113 aa10.98□□□□□ -0.65
TNC-212ENST00000542877 FAM201AQ5SY85 155 aa10.98□□□□□ -0.65
TNC-212ENST00000542877 RNASE7Q9H1E1 156 aaKnown RBP10.98□□□□□ -0.65
TNC-212ENST00000542877 TNFRSF18Q9Y5U5 241 aa10.98□□□□□ -0.65
TNC-212ENST00000542877 ALPK2Q86TB3 2170 aa10.98□□□□□ -0.65
TNC-212ENST00000542877 SCN2AQ99250 2005 aa10.98□□□□□ -0.65
TNC-212ENST00000542877 C9JCJ5 164 aa10.98□□□□□ -0.65
TNC-212ENST00000542877 RNASE1P07998 156 aaKnown RBP10.98□□□□□ -0.65
TNC-212ENST00000542877 ARPC1AQ92747 370 aa10.98□□□□□ -0.65
TNC-212ENST00000542877 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.98□□□□□ -0.65
TNC-212ENST00000542877 ST6GALNAC3Q8NDV1 305 aa10.98□□□□□ -0.65
TNC-212ENST00000542877 VCX2Q9H322 139 aa10.98□□□□□ -0.65
TNC-212ENST00000542877 WFDC1Q9HC57 220 aa10.98□□□□□ -0.65
TNC-212ENST00000542877 PRR19A6NJB7 356 aa10.98□□□□□ -0.65
TNC-212ENST00000542877 GFRA3O60609 400 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms