RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 DIRC3C9JPN6 131 aa6.64□□□□□ -1.35
PDLIM5-221ENST00000542407 IGLC2P0DOY2 106 aa6.64□□□□□ -1.35
PDLIM5-221ENST00000542407 IGLC3P0DOY3 106 aa6.64□□□□□ -1.35
PDLIM5-221ENST00000542407 EGR1P18146 543 aa6.64□□□□□ -1.35
PDLIM5-221ENST00000542407 MDH2P40926 338 aaKnown RBP6.64□□□□□ -1.35
PDLIM5-221ENST00000542407 PSMB3P49720 205 aa6.64□□□□□ -1.35
PDLIM5-221ENST00000542407 PPP1CBP62140 327 aa6.64□□□□□ -1.35
PDLIM5-221ENST00000542407 PSG9Q00887 426 aa6.64□□□□□ -1.35
PDLIM5-221ENST00000542407 EFNB3Q15768 340 aa6.64□□□□□ -1.35
PDLIM5-221ENST00000542407 IZUMO4Q1ZYL8 232 aa6.64□□□□□ -1.35
PDLIM5-221ENST00000542407 SEM1Q6ZVN7 128 aa6.64□□□□□ -1.35
PDLIM5-221ENST00000542407 RBMXL3Q8N7X1 1067 aaKnown RBP6.64□□□□□ -1.35
PDLIM5-221ENST00000542407 STARD4Q96DR4 205 aa6.64□□□□□ -1.35
PDLIM5-221ENST00000542407 MED12LQ86YW9 2145 aa6.64□□□□□ -1.35
PDLIM5-221ENST00000542407 J3QR06 171 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 DEGS1O15121 323 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 KLK10O43240 276 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 IAPPP10997 89 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 COX5AP20674 150 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 SRP14P37108 136 aaKnown RBP6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 FUT6P51993 359 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 TBC1D26Q86UD7 250 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 ATOH7Q8N100 152 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 OR9G4Q8NGQ1 327 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 SLC25A22Q9H936 323 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 FBXL7Q9UJT9 491 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 MYO7BQ6PIF6 2116 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 SH2D1BO14796 132 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 FOXH1O75593 365 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 TSPOP30536 169 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 TMEM211Q6ICI0 200 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 Q6ZT83 130 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 PNKDQ8N490 385 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 SIGLECL1Q8N7X8 197 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 SGMS2Q8NHU3 365 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 BORCS8Q96FH0 119 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 NEIL1Q96FI4 390 aaPredicted RBP6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 WNT10AQ9GZT5 417 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 C11orf1Q9H5F2 150 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 NPVFQ9HCQ7 196 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 JKAMPQ9P055 326 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 PXMP4Q9Y6I8 212 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 GAGE10A6NGK3 116 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 F2Z2F3 143 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 CGAP01215 116 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 CELA3BP08861 270 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 CRISP2P16562 243 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 SPINK2P20155 84 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 CBLN1P23435 193 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 CTRLP40313 264 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 UBE2NP61088 152 aaKnown RBP6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 RPL15P61313 204 aaKnown RBP6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 FOXF2Q12947 444 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 POU2AF1Q16633 256 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 PIGCQ92535 297 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 TMEM222Q9H0R3 208 aa6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 RALYQ9UKM9 306 aaKnown RBP6.63□□□□□ -1.35
PDLIM5-221ENST00000542407 CNOT1A5YKK6 2376 aaKnown RBP6.62□□□□□ -1.35
PDLIM5-221ENST00000542407 KIAA1324LA8MWY0 1029 aaPredicted RBP6.62□□□□□ -1.35
PDLIM5-221ENST00000542407 TYMSP04818 313 aa6.62□□□□□ -1.35
PDLIM5-221ENST00000542407 PMCHP20382 165 aa6.62□□□□□ -1.35
PDLIM5-221ENST00000542407 PRTN3P24158 256 aa6.62□□□□□ -1.35
PDLIM5-221ENST00000542407 PLP2Q04941 152 aa6.62□□□□□ -1.35
PDLIM5-221ENST00000542407 PRDX4Q13162 271 aa6.62□□□□□ -1.35
PDLIM5-221ENST00000542407 MRAPQ8TCY5 172 aa6.62□□□□□ -1.35
PDLIM5-221ENST00000542407 MBD3L1Q8WWY6 194 aa6.62□□□□□ -1.35
PDLIM5-221ENST00000542407 ANAPC13Q9BS18 74 aa6.62□□□□□ -1.35
PDLIM5-221ENST00000542407 C1QTNF4Q9BXJ3 329 aa6.62□□□□□ -1.35
PDLIM5-221ENST00000542407 RAB9BQ9NP90 201 aa6.62□□□□□ -1.35
PDLIM5-221ENST00000542407 RNF114Q9Y508 228 aa6.62□□□□□ -1.35
PDLIM5-221ENST00000542407 A0A1W2PRE2 83 aa6.62□□□□□ -1.35
PDLIM5-221ENST00000542407 A0A1W2PRX2 142 aa6.62□□□□□ -1.35
PDLIM5-221ENST00000542407 MBD3L4A6NDZ8 208 aaPredicted RBP6.62□□□□□ -1.35
PDLIM5-221ENST00000542407 MBD3L3A6NE82 208 aaPredicted RBP6.62□□□□□ -1.35
PDLIM5-221ENST00000542407 MBD3L5A6NJ08 208 aaPredicted RBP6.62□□□□□ -1.35
PDLIM5-221ENST00000542407 CRYAAP02489 173 aa6.62□□□□□ -1.35
PDLIM5-221ENST00000542407 FOXE3Q13461 319 aa6.62□□□□□ -1.35
PDLIM5-221ENST00000542407 FA2HQ7L5A8 372 aa6.62□□□□□ -1.35
PDLIM5-221ENST00000542407 WDR31Q8NA23 367 aa6.62□□□□□ -1.35
PDLIM5-221ENST00000542407 MBD3L2Q8NHZ7 208 aaPredicted RBP6.62□□□□□ -1.35
PDLIM5-221ENST00000542407 NAA38Q9BRA0 125 aaKnown RBP6.62□□□□□ -1.35
PDLIM5-221ENST00000542407 PAGE4O60829 102 aa6.61□□□□□ -1.35
PDLIM5-221ENST00000542407 LYZL6O75951 148 aa6.61□□□□□ -1.35
PDLIM5-221ENST00000542407 PPYP01298 95 aa6.61□□□□□ -1.35
PDLIM5-221ENST00000542407 HBZP02008 142 aa6.61□□□□□ -1.35
PDLIM5-221ENST00000542407 ADH4P08319 380 aa6.61□□□□□ -1.35
PDLIM5-221ENST00000542407 UQCRFS1P47985 274 aa6.61□□□□□ -1.35
PDLIM5-221ENST00000542407 MALLQ13021 153 aa6.61□□□□□ -1.35
PDLIM5-221ENST00000542407 PIGYQ3MUY2 71 aa6.61□□□□□ -1.35
PDLIM5-221ENST00000542407 TIMM23BQ5SRD1 257 aa6.61□□□□□ -1.35
PDLIM5-221ENST00000542407 MBNL2Q5VZF2 373 aaKnown RBP6.61□□□□□ -1.35
PDLIM5-221ENST00000542407 UFSP1Q6NVU6 142 aa6.61□□□□□ -1.35
PDLIM5-221ENST00000542407 UHRF2Q96PU4 802 aa6.61□□□□□ -1.35
PDLIM5-221ENST00000542407 AGMATQ9BSE5 352 aa6.61□□□□□ -1.35
PDLIM5-221ENST00000542407 SERTAD4Q9NUC0 356 aa6.61□□□□□ -1.35
PDLIM5-221ENST00000542407 TP53TG3Q9ULZ0 132 aa6.61□□□□□ -1.35
PDLIM5-221ENST00000542407 CEP250Q9BV73 2442 aa6.61□□□□□ -1.35
PDLIM5-221ENST00000542407 IGHV2-26A0A0B4J1V2 119 aa6.61□□□□□ -1.35
PDLIM5-221ENST00000542407 TRAV38-1A0A0B4J264 116 aa6.61□□□□□ -1.35
PDLIM5-221ENST00000542407 UBE2L5PA0A1B0GUS4 154 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 120.2 ms