RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 TMEM229BQ8NBD8 167 aa12.35□□□□□ -0.43
CCND1-205ENST00000542367 ZNF486Q96H40 463 aaPredicted RBP12.35□□□□□ -0.43
CCND1-205ENST00000542367 SPATA25Q9BR10 227 aa12.35□□□□□ -0.43
CCND1-205ENST00000542367 ZNF436Q9C0F3 470 aaPredicted RBP12.35□□□□□ -0.43
CCND1-205ENST00000542367 OR11H12B2RN74 326 aa12.34□□□□□ -0.43
CCND1-205ENST00000542367 GABARAPH6UMI1 98 aa12.34□□□□□ -0.43
CCND1-205ENST00000542367 C8orf88P0DMB2 117 aa12.34□□□□□ -0.43
CCND1-205ENST00000542367 ELLP55199 621 aaPredicted RBP12.34□□□□□ -0.43
CCND1-205ENST00000542367 TAS2R19P59542 299 aa12.34□□□□□ -0.43
CCND1-205ENST00000542367 BTNL8Q6UX41 500 aa12.34□□□□□ -0.43
CCND1-205ENST00000542367 LINC00322Q6ZN03 302 aaPredicted RBP12.34□□□□□ -0.43
CCND1-205ENST00000542367 OR1L6Q8NGR2 347 aa12.34□□□□□ -0.43
CCND1-205ENST00000542367 TERB2Q8NHR7 220 aa12.34□□□□□ -0.43
CCND1-205ENST00000542367 BSCL2Q96G97 398 aaPredicted RBP12.34□□□□□ -0.43
CCND1-205ENST00000542367 CITED4Q96RK1 184 aa12.34□□□□□ -0.43
CCND1-205ENST00000542367 WFDC10AQ9H1F0 79 aa12.34□□□□□ -0.43
CCND1-205ENST00000542367 C21orf62Q9NYP8 219 aa12.34□□□□□ -0.43
CCND1-205ENST00000542367 MRPL27Q9P0M9 148 aaKnown RBP12.34□□□□□ -0.43
CCND1-205ENST00000542367 UFC1Q9Y3C8 167 aa12.34□□□□□ -0.43
CCND1-205ENST00000542367 CEPT1Q9Y6K0 416 aa12.34□□□□□ -0.43
CCND1-205ENST00000542367 RBMY1BA6NDE4 496 aaKnown RBP12.33□□□□□ -0.44
CCND1-205ENST00000542367 RBMY1EA6NEQ0 496 aaKnown RBP12.33□□□□□ -0.44
CCND1-205ENST00000542367 F8W735 103 aaPredicted RBP12.33□□□□□ -0.44
CCND1-205ENST00000542367 K7EIM0 57 aa12.33□□□□□ -0.44
CCND1-205ENST00000542367 RAB3DO95716 219 aa12.33□□□□□ -0.44
CCND1-205ENST00000542367 CD74P04233 296 aa12.33□□□□□ -0.44
CCND1-205ENST00000542367 RBMY1DP0C7P1 496 aaKnown RBP12.33□□□□□ -0.44
CCND1-205ENST00000542367 PPP5CP53041 499 aa12.33□□□□□ -0.44
CCND1-205ENST00000542367 HSPE1P61604 102 aaKnown RBP12.33□□□□□ -0.44
CCND1-205ENST00000542367 IZUMO4Q1ZYL8 232 aa12.33□□□□□ -0.44
CCND1-205ENST00000542367 SCGB2B2Q4G0G5 96 aa12.33□□□□□ -0.44
CCND1-205ENST00000542367 STEAP1BQ6NZ63 245 aa12.33□□□□□ -0.44
CCND1-205ENST00000542367 SPSB3Q6PJ21 355 aa12.33□□□□□ -0.44
CCND1-205ENST00000542367 OR2C3Q8N628 320 aa12.33□□□□□ -0.44
CCND1-205ENST00000542367 UBAC2Q8NBM4 344 aa12.33□□□□□ -0.44
CCND1-205ENST00000542367 OR1P1Q8NH06 330 aa12.33□□□□□ -0.44
CCND1-205ENST00000542367 MARC2Q969Z3 335 aa12.33□□□□□ -0.44
CCND1-205ENST00000542367 TP53RKQ96S44 253 aa12.33□□□□□ -0.44
CCND1-205ENST00000542367 CHRDL1Q9BU40 450 aa12.33□□□□□ -0.44
CCND1-205ENST00000542367 NBEAL2Q6ZNJ1 2754 aa12.32□□□□□ -0.44
CCND1-205ENST00000542367 C3orf85A0A1B0GTC6 90 aa12.32□□□□□ -0.44
CCND1-205ENST00000542367 SCAF4O95104 1147 aaKnown RBP12.32□□□□□ -0.44
CCND1-205ENST00000542367 PRCDQ00LT1 54 aa12.32□□□□□ -0.44
CCND1-205ENST00000542367 Q56UQ5 140 aa12.32□□□□□ -0.44
CCND1-205ENST00000542367 CASC10Q5T4H9 136 aa12.32□□□□□ -0.44
CCND1-205ENST00000542367 SLC16A13Q7RTY0 426 aa12.32□□□□□ -0.44
CCND1-205ENST00000542367 OR52B4Q8NGK2 314 aa12.32□□□□□ -0.44
CCND1-205ENST00000542367 ZFAND1Q8TCF1 268 aa12.32□□□□□ -0.44
CCND1-205ENST00000542367 RAB2BQ8WUD1 216 aa12.32□□□□□ -0.44
CCND1-205ENST00000542367 TMEM190Q8WZ59 177 aa12.32□□□□□ -0.44
CCND1-205ENST00000542367 ATP6V0BQ99437 205 aa12.32□□□□□ -0.44
CCND1-205ENST00000542367 SRD5A3Q9H8P0 318 aa12.32□□□□□ -0.44
CCND1-205ENST00000542367 COPZ2Q9P299 210 aa12.32□□□□□ -0.44
CCND1-205ENST00000542367 DNAH7Q8WXX0 4024 aa12.32□□□□□ -0.44
CCND1-205ENST00000542367 NDUFA4O00483 81 aa12.31□□□□□ -0.44
CCND1-205ENST00000542367 IGKV1-5P01602 117 aa12.31□□□□□ -0.44
CCND1-205ENST00000542367 LYL1P12980 280 aa12.31□□□□□ -0.44
CCND1-205ENST00000542367 ADMP35318 185 aa12.31□□□□□ -0.44
CCND1-205ENST00000542367 MRPS10P82664 201 aaKnown RBP12.31□□□□□ -0.44
CCND1-205ENST00000542367 SSBP1Q04837 148 aaKnown RBP12.31□□□□□ -0.44
CCND1-205ENST00000542367 SP6Q3SY56 376 aa12.31□□□□□ -0.44
CCND1-205ENST00000542367 RBPMS2Q6ZRY4 209 aaKnown RBP12.31□□□□□ -0.44
CCND1-205ENST00000542367 CCDC71LQ8N9Z2 235 aa12.31□□□□□ -0.44
CCND1-205ENST00000542367 OR13C8Q8NGS7 320 aa12.31□□□□□ -0.44
CCND1-205ENST00000542367 MARCH1Q8TCQ1 289 aa12.31□□□□□ -0.44
CCND1-205ENST00000542367 DYNC2LI1Q8TCX1 351 aa12.31□□□□□ -0.44
CCND1-205ENST00000542367 MISP3Q96FF7 219 aa12.31□□□□□ -0.44
CCND1-205ENST00000542367 DIRAS2Q96HU8 199 aa12.31□□□□□ -0.44
CCND1-205ENST00000542367 EDA2RQ9HAV5 297 aa12.31□□□□□ -0.44
CCND1-205ENST00000542367 TRAV25A0A0B4J276 109 aa12.3□□□□□ -0.44
CCND1-205ENST00000542367 I3L2K1 104 aa12.3□□□□□ -0.44
CCND1-205ENST00000542367 AKR1C2P52895 323 aa12.3□□□□□ -0.44
CCND1-205ENST00000542367 TMBIM6P55061 237 aa12.3□□□□□ -0.44
CCND1-205ENST00000542367 ERHP84090 104 aaKnown RBP12.3□□□□□ -0.44
CCND1-205ENST00000542367 IL18Q14116 193 aa12.3□□□□□ -0.44
CCND1-205ENST00000542367 TRIM16LQ309B1 348 aa12.3□□□□□ -0.44
CCND1-205ENST00000542367 ANKRD55Q3KP44 614 aa12.3□□□□□ -0.44
CCND1-205ENST00000542367 SPINK9Q5DT21 86 aa12.3□□□□□ -0.44
CCND1-205ENST00000542367 FAAP20Q6NZ36 180 aa12.3□□□□□ -0.44
CCND1-205ENST00000542367 BCL7BQ9BQE9 202 aa12.3□□□□□ -0.44
CCND1-205ENST00000542367 C20orf24Q9BUV8 137 aa12.3□□□□□ -0.44
CCND1-205ENST00000542367 HIPK2Q9H2X6 1198 aa12.3□□□□□ -0.44
CCND1-205ENST00000542367 DAZ1Q9NQZ3 744 aaKnown RBP12.3□□□□□ -0.44
CCND1-205ENST00000542367 CCDC59Q9P031 241 aaKnown RBP12.3□□□□□ -0.44
CCND1-205ENST00000542367 IGHV3OR16-8A0A075B7F1 116 aa12.29□□□□□ -0.44
CCND1-205ENST00000542367 A0A0B4J293 547 aa12.29□□□□□ -0.44
CCND1-205ENST00000542367 CTDSPLO15194 276 aa12.29□□□□□ -0.44
CCND1-205ENST00000542367 ATG12O94817 140 aa12.29□□□□□ -0.44
CCND1-205ENST00000542367 CTSDP07339 412 aaPredicted RBP12.29□□□□□ -0.44
CCND1-205ENST00000542367 CTSGP08311 255 aa12.29□□□□□ -0.44
CCND1-205ENST00000542367 P0C879 139 aa12.29□□□□□ -0.44
CCND1-205ENST00000542367 MFAP4P55083 255 aa12.29□□□□□ -0.44
CCND1-205ENST00000542367 MEF2DQ14814 521 aa12.29□□□□□ -0.44
CCND1-205ENST00000542367 ZNF114Q8NC26 417 aa12.29□□□□□ -0.44
CCND1-205ENST00000542367 SMIM4Q8WVI0 70 aa12.29□□□□□ -0.44
CCND1-205ENST00000542367 PINX1Q96BK5 328 aaKnown RBP12.29□□□□□ -0.44
CCND1-205ENST00000542367 ISOC1Q96CN7 298 aa12.29□□□□□ -0.44
CCND1-205ENST00000542367 C5orf66Q9H5L9 145 aa12.29□□□□□ -0.44
CCND1-205ENST00000542367 RETNQ9HD89 108 aa12.29□□□□□ -0.44
CCND1-205ENST00000542367 GAR1Q9NY12 217 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms