RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 RARRES2Q99969 163 aa11.38□□□□□ -0.59
RTN3-211ENST00000542238 CSTL1Q9H114 145 aa11.38□□□□□ -0.59
RTN3-211ENST00000542238 PLEKHA2Q9HB19 425 aa11.38□□□□□ -0.59
RTN3-211ENST00000542238 IGHV3OR16-8A0A075B7F1 116 aa11.37□□□□□ -0.59
RTN3-211ENST00000542238 C15orf62A8K5M9 175 aa11.37□□□□□ -0.59
RTN3-211ENST00000542238 ZNF207O43670 478 aaKnown RBP11.37□□□□□ -0.59
RTN3-211ENST00000542238 PTHLHP12272 177 aa11.37□□□□□ -0.59
RTN3-211ENST00000542238 BCAP31P51572 246 aa11.37□□□□□ -0.59
RTN3-211ENST00000542238 FXYD4P59646 89 aa11.37□□□□□ -0.59
RTN3-211ENST00000542238 WT1-ASQ06250 92 aa11.37□□□□□ -0.59
RTN3-211ENST00000542238 RBMS2Q15434 407 aaKnown RBP11.37□□□□□ -0.59
RTN3-211ENST00000542238 CTF1Q16619 201 aa11.37□□□□□ -0.59
RTN3-211ENST00000542238 RGS21Q2M5E4 152 aa11.37□□□□□ -0.59
RTN3-211ENST00000542238 AADACL3Q5VUY0 350 aa11.37□□□□□ -0.59
RTN3-211ENST00000542238 HOGA1Q86XE5 327 aa11.37□□□□□ -0.59
RTN3-211ENST00000542238 APRG1Q8IVJ8 170 aa11.37□□□□□ -0.59
RTN3-211ENST00000542238 OR1L8Q8NGR8 309 aa11.37□□□□□ -0.59
RTN3-211ENST00000542238 OR51H1Q8NH63 302 aa11.37□□□□□ -0.59
RTN3-211ENST00000542238 LGALS14Q8TCE9 139 aa11.37□□□□□ -0.59
RTN3-211ENST00000542238 CHRDL1Q9BU40 450 aa11.37□□□□□ -0.59
RTN3-211ENST00000542238 HINT2Q9BX68 163 aa11.37□□□□□ -0.59
RTN3-211ENST00000542238 COMMD9Q9P000 198 aa11.37□□□□□ -0.59
RTN3-211ENST00000542238 FBXL17Q9UF56 701 aa11.37□□□□□ -0.59
RTN3-211ENST00000542238 SSR3Q9UNL2 185 aa11.37□□□□□ -0.59
RTN3-211ENST00000542238 TRAV18A0A075B6X5 111 aa11.36□□□□□ -0.59
RTN3-211ENST00000542238 IGHV3-21A0A0B4J1V1 117 aa11.36□□□□□ -0.59
RTN3-211ENST00000542238 TEX50A0A1B0GTY4 177 aa11.36□□□□□ -0.59
RTN3-211ENST00000542238 Q56UQ5 140 aa11.36□□□□□ -0.59
RTN3-211ENST00000542238 GVQW1Q8N7I0 195 aa11.36□□□□□ -0.59
RTN3-211ENST00000542238 ZBTB8BQ8NAP8 495 aaPredicted RBP11.36□□□□□ -0.59
RTN3-211ENST00000542238 SCARB1Q8WTV0 552 aa11.36□□□□□ -0.59
RTN3-211ENST00000542238 LSM10Q969L4 123 aaKnown RBP11.36□□□□□ -0.59
RTN3-211ENST00000542238 CMTM3Q96MX0 182 aa11.36□□□□□ -0.59
RTN3-211ENST00000542238 TXNL4BQ9NX01 149 aaKnown RBP11.36□□□□□ -0.59
RTN3-211ENST00000542238 SMPXQ9UHP9 88 aa11.36□□□□□ -0.59
RTN3-211ENST00000542238 F11RQ9Y624 299 aaKnown RBP11.36□□□□□ -0.59
RTN3-211ENST00000542238 ADMP35318 185 aa11.35□□□□□ -0.59
RTN3-211ENST00000542238 NANOS2P60321 138 aaKnown RBP11.35□□□□□ -0.59
RTN3-211ENST00000542238 RELQ04864 619 aaPredicted RBP11.35□□□□□ -0.59
RTN3-211ENST00000542238 SFXN4Q6P4A7 337 aa11.35□□□□□ -0.59
RTN3-211ENST00000542238 ZNF818PQ6ZRF7 136 aa11.35□□□□□ -0.59
RTN3-211ENST00000542238 TMEM17Q86X19 198 aa11.35□□□□□ -0.59
RTN3-211ENST00000542238 OR11H2Q8NH07 326 aa11.35□□□□□ -0.59
RTN3-211ENST00000542238 GIMAP1Q8WWP7 306 aa11.35□□□□□ -0.59
RTN3-211ENST00000542238 RNF2Q99496 336 aa11.35□□□□□ -0.59
RTN3-211ENST00000542238 C11orf68Q9H3H3 251 aaKnown RBP11.35□□□□□ -0.59
RTN3-211ENST00000542238 NDUFA4L2Q9NRX3 87 aa11.35□□□□□ -0.59
RTN3-211ENST00000542238 IGHV7-4-1A0A0J9YVY3 117 aa11.34□□□□□ -0.59
RTN3-211ENST00000542238 MARCH11A6NNE9 402 aa11.34□□□□□ -0.59
RTN3-211ENST00000542238 SNAPC5O75971 98 aa11.34□□□□□ -0.59
RTN3-211ENST00000542238 TFPI2P48307 235 aa11.34□□□□□ -0.59
RTN3-211ENST00000542238 TCTAP57738 103 aa11.34□□□□□ -0.59
RTN3-211ENST00000542238 HERV-K104P61576 105 aa11.34□□□□□ -0.59
RTN3-211ENST00000542238 OXA1LQ15070 435 aa11.34□□□□□ -0.59
RTN3-211ENST00000542238 TMEM116Q8NCL8 245 aa11.34□□□□□ -0.59
RTN3-211ENST00000542238 C2CD4CQ8TF44 421 aa11.34□□□□□ -0.59
RTN3-211ENST00000542238 RHPN1-AS1Q9BWJ2 59 aa11.34□□□□□ -0.59
RTN3-211ENST00000542238 OR51B2Q9Y5P1 312 aa11.34□□□□□ -0.59
RTN3-211ENST00000542238 ETV7Q9Y603 341 aa11.34□□□□□ -0.59
RTN3-211ENST00000542238 BOLA2-SMG1P6H3BVE0 249 aa11.33□□□□□ -0.6
RTN3-211ENST00000542238 CHEK1O14757 476 aa11.33□□□□□ -0.6
RTN3-211ENST00000542238 NUPL2O15504 423 aaKnown RBP11.33□□□□□ -0.6
RTN3-211ENST00000542238 YIF1AO95070 293 aa11.33□□□□□ -0.6
RTN3-211ENST00000542238 CTSGP08311 255 aa11.33□□□□□ -0.6
RTN3-211ENST00000542238 CBX5P45973 191 aa11.33□□□□□ -0.6
RTN3-211ENST00000542238 MFAP2P55001 183 aa11.33□□□□□ -0.6
RTN3-211ENST00000542238 SCAND1P57086 179 aa11.33□□□□□ -0.6
RTN3-211ENST00000542238 PAFAH1B2P68402 229 aa11.33□□□□□ -0.6
RTN3-211ENST00000542238 ZNF124Q15973 351 aa11.33□□□□□ -0.6
RTN3-211ENST00000542238 OR5AP2Q8NGF4 316 aa11.33□□□□□ -0.6
RTN3-211ENST00000542238 TMEM56Q96MV1 263 aa11.33□□□□□ -0.6
RTN3-211ENST00000542238 HERC2O95714 4834 aa11.32□□□□□ -0.6
RTN3-211ENST00000542238 IGKV3-7A0A075B6H7 116 aa11.32□□□□□ -0.6
RTN3-211ENST00000542238 A0A0A6YYH2 397 aa11.32□□□□□ -0.6
RTN3-211ENST00000542238 A6NJ64 397 aa11.32□□□□□ -0.6
RTN3-211ENST00000542238 F8W735 103 aaPredicted RBP11.32□□□□□ -0.6
RTN3-211ENST00000542238 K7EIM0 57 aa11.32□□□□□ -0.6
RTN3-211ENST00000542238 KRASP01116 189 aa11.32□□□□□ -0.6
RTN3-211ENST00000542238 FCER2P06734 321 aa11.32□□□□□ -0.6
RTN3-211ENST00000542238 F2RP25116 425 aa11.32□□□□□ -0.6
RTN3-211ENST00000542238 GNRHRP30968 328 aa11.32□□□□□ -0.6
RTN3-211ENST00000542238 TRIM16LQ309B1 348 aa11.32□□□□□ -0.6
RTN3-211ENST00000542238 DYNC2LI1Q8TCX1 351 aa11.32□□□□□ -0.6
RTN3-211ENST00000542238 DIABLOQ9NR28 239 aa11.32□□□□□ -0.6
RTN3-211ENST00000542238 FKBP11Q9NYL4 201 aa11.32□□□□□ -0.6
RTN3-211ENST00000542238 IGHV3-49A0A0A0MS15 119 aa11.31□□□□□ -0.6
RTN3-211ENST00000542238 TRAV14DV4A0A0A6YYC5 116 aa11.31□□□□□ -0.6
RTN3-211ENST00000542238 RLN1P04808 185 aa11.31□□□□□ -0.6
RTN3-211ENST00000542238 CD5P06127 495 aa11.31□□□□□ -0.6
RTN3-211ENST00000542238 LPAR6P43657 344 aa11.31□□□□□ -0.6
RTN3-211ENST00000542238 TMEM187Q14656 261 aa11.31□□□□□ -0.6
RTN3-211ENST00000542238 GBGT1Q8N5D6 347 aa11.31□□□□□ -0.6
RTN3-211ENST00000542238 OR1P1Q8NH06 330 aa11.31□□□□□ -0.6
RTN3-211ENST00000542238 SLC25A38Q96DW6 304 aa11.31□□□□□ -0.6
RTN3-211ENST00000542238 OR10C1Q96KK4 312 aa11.31□□□□□ -0.6
RTN3-211ENST00000542238 AUNIPQ9H7T9 357 aa11.31□□□□□ -0.6
RTN3-211ENST00000542238 PRNDQ9UKY0 176 aa11.31□□□□□ -0.6
RTN3-211ENST00000542238 NSG2Q9Y328 171 aa11.31□□□□□ -0.6
RTN3-211ENST00000542238 PGLYRP1O75594 196 aaPredicted RBP11.3□□□□□ -0.6
RTN3-211ENST00000542238 CA1P00915 261 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 163.4 ms