RNA–Protein interactions for RNA: ENST00000541416.5

SNHG1-216, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 996 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-216ENST00000541416 BLOC1S6Q9UL45 172 aa8.98□□□□□ -0.97
SNHG1-216ENST00000541416 APLNQ9ULZ1 77 aa8.98□□□□□ -0.97
SNHG1-216ENST00000541416 IGHV3-21A0A0B4J1V1 117 aa8.97□□□□□ -0.97
SNHG1-216ENST00000541416 MARCH11A6NNE9 402 aa8.97□□□□□ -0.97
SNHG1-216ENST00000541416 C15orf61A6NNL5 157 aa8.97□□□□□ -0.97
SNHG1-216ENST00000541416 DNASE2O00115 360 aaPredicted RBP8.97□□□□□ -0.97
SNHG1-216ENST00000541416 MFAP4P55083 255 aa8.97□□□□□ -0.97
SNHG1-216ENST00000541416 FXYD4P59646 89 aa8.97□□□□□ -0.97
SNHG1-216ENST00000541416 HERV-K104P61576 105 aa8.97□□□□□ -0.97
SNHG1-216ENST00000541416 ZNF124Q15973 351 aa8.97□□□□□ -0.97
SNHG1-216ENST00000541416 TPRA1Q86W33 373 aa8.97□□□□□ -0.97
SNHG1-216ENST00000541416 STHQ8IWL8 128 aa8.97□□□□□ -0.97
SNHG1-216ENST00000541416 OR10C1Q96KK4 312 aa8.97□□□□□ -0.97
SNHG1-216ENST00000541416 TXN2Q99757 166 aa8.97□□□□□ -0.97
SNHG1-216ENST00000541416 NDUFA4L2Q9NRX3 87 aa8.97□□□□□ -0.97
SNHG1-216ENST00000541416 OR51B2Q9Y5P1 312 aa8.97□□□□□ -0.97
SNHG1-216ENST00000541416 TRAV10A0A0B4J240 114 aa8.96□□□□□ -0.98
SNHG1-216ENST00000541416 K7EIM0 57 aa8.96□□□□□ -0.98
SNHG1-216ENST00000541416 DEFB4AO15263 64 aa8.96□□□□□ -0.98
SNHG1-216ENST00000541416 SSX5O60225 188 aa8.96□□□□□ -0.98
SNHG1-216ENST00000541416 CTSGP08311 255 aa8.96□□□□□ -0.98
SNHG1-216ENST00000541416 C22orf42Q6IC83 251 aa8.96□□□□□ -0.98
SNHG1-216ENST00000541416 ZNF773Q6PK81 442 aa8.96□□□□□ -0.98
SNHG1-216ENST00000541416 TCF24Q7RTU0 167 aa8.96□□□□□ -0.98
SNHG1-216ENST00000541416 CADM3Q8N126 398 aa8.96□□□□□ -0.98
SNHG1-216ENST00000541416 GBGT1Q8N5D6 347 aa8.96□□□□□ -0.98
SNHG1-216ENST00000541416 OR1P1Q8NH06 330 aa8.96□□□□□ -0.98
SNHG1-216ENST00000541416 DGCR14Q96DF8 476 aaKnown RBP8.96□□□□□ -0.98
SNHG1-216ENST00000541416 TSC22D3Q99576 134 aa8.96□□□□□ -0.98
SNHG1-216ENST00000541416 TMEM231Q9H6L2 316 aa8.96□□□□□ -0.98
SNHG1-216ENST00000541416 DAPK2Q9UIK4 370 aa8.96□□□□□ -0.98
SNHG1-216ENST00000541416 PRNDQ9UKY0 176 aa8.96□□□□□ -0.98
SNHG1-216ENST00000541416 FAT2Q9NYQ8 4349 aa8.96□□□□□ -0.98
SNHG1-216ENST00000541416 TRAV2A0A0B4J234 112 aa8.95□□□□□ -0.98
SNHG1-216ENST00000541416 MIFP14174 115 aa8.95□□□□□ -0.98
SNHG1-216ENST00000541416 F2RP25116 425 aa8.95□□□□□ -0.98
SNHG1-216ENST00000541416 CBX5P45973 191 aa8.95□□□□□ -0.98
SNHG1-216ENST00000541416 RPL11P62913 178 aaKnown RBP8.95□□□□□ -0.98
SNHG1-216ENST00000541416 ZNF818PQ6ZRF7 136 aa8.95□□□□□ -0.98
SNHG1-216ENST00000541416 TMEM17Q86X19 198 aa8.95□□□□□ -0.98
SNHG1-216ENST00000541416 HOGA1Q86XE5 327 aa8.95□□□□□ -0.98
SNHG1-216ENST00000541416 CMTM1Q8IZ96 169 aa8.95□□□□□ -0.98
SNHG1-216ENST00000541416 GIMAP1Q8WWP7 306 aa8.95□□□□□ -0.98
SNHG1-216ENST00000541416 SLC25A46Q96AG3 418 aa8.95□□□□□ -0.98
SNHG1-216ENST00000541416 RHBDL2Q9NX52 303 aa8.95□□□□□ -0.98
SNHG1-216ENST00000541416 DNAH2Q9P225 4427 aa8.94□□□□□ -0.98
SNHG1-216ENST00000541416 IGHV3-49A0A0A0MS15 119 aa8.94□□□□□ -0.98
SNHG1-216ENST00000541416 A0A0A6YYH2 397 aa8.94□□□□□ -0.98
SNHG1-216ENST00000541416 SMIM30A4D0T7 59 aa8.94□□□□□ -0.98
SNHG1-216ENST00000541416 A6NJ64 397 aa8.94□□□□□ -0.98
SNHG1-216ENST00000541416 F8W735 103 aaPredicted RBP8.94□□□□□ -0.98
SNHG1-216ENST00000541416 ST8SIA3O43173 380 aa8.94□□□□□ -0.98
SNHG1-216ENST00000541416 GNG7O60262 68 aa8.94□□□□□ -0.98
SNHG1-216ENST00000541416 KRASP01116 189 aa8.94□□□□□ -0.98
SNHG1-216ENST00000541416 P0DMU3 169 aa8.94□□□□□ -0.98
SNHG1-216ENST00000541416 FAM231AP0DMU4 169 aa8.94□□□□□ -0.98
SNHG1-216ENST00000541416 FAM231CP0DMU5 169 aa8.94□□□□□ -0.98
SNHG1-216ENST00000541416 SCAND1P57086 179 aa8.94□□□□□ -0.98
SNHG1-216ENST00000541416 DEFB131AP59861 70 aa8.94□□□□□ -0.98
SNHG1-216ENST00000541416 FAM90A2PQ658T7 463 aa8.94□□□□□ -0.98
SNHG1-216ENST00000541416 PVRIGQ6DKI7 326 aa8.94□□□□□ -0.98
SNHG1-216ENST00000541416 MORN3Q6PF18 240 aaPredicted RBP8.94□□□□□ -0.98
SNHG1-216ENST00000541416 DUSP18Q8NEJ0 188 aa8.94□□□□□ -0.98
SNHG1-216ENST00000541416 OR5AP2Q8NGF4 316 aa8.94□□□□□ -0.98
SNHG1-216ENST00000541416 LGALS14Q8TCE9 139 aa8.94□□□□□ -0.98
SNHG1-216ENST00000541416 MISP3Q96FF7 219 aa8.94□□□□□ -0.98
SNHG1-216ENST00000541416 RNF126Q9BV68 326 aa8.94□□□□□ -0.98
SNHG1-216ENST00000541416 NXF2Q9GZY0 626 aaKnown RBP8.94□□□□□ -0.98
SNHG1-216ENST00000541416 DIABLOQ9NR28 239 aa8.94□□□□□ -0.98
SNHG1-216ENST00000541416 IGHV4-4A0A075B6R2 117 aa8.93□□□□□ -0.98
SNHG1-216ENST00000541416 TRAV18A0A075B6X5 111 aa8.93□□□□□ -0.98
SNHG1-216ENST00000541416 RLN1P04808 185 aa8.93□□□□□ -0.98
SNHG1-216ENST00000541416 SPP1P10451 314 aa8.93□□□□□ -0.98
SNHG1-216ENST00000541416 HLA-DMBP28068 263 aa8.93□□□□□ -0.98
SNHG1-216ENST00000541416 S100GP29377 79 aa8.93□□□□□ -0.98
SNHG1-216ENST00000541416 FGF9P31371 208 aaPredicted RBP8.93□□□□□ -0.98
SNHG1-216ENST00000541416 AQP4P55087 323 aa8.93□□□□□ -0.98
SNHG1-216ENST00000541416 LEMD1Q68G75 181 aa8.93□□□□□ -0.98
SNHG1-216ENST00000541416 SFXN4Q6P4A7 337 aa8.93□□□□□ -0.98
SNHG1-216ENST00000541416 Q8NAQ8 132 aa8.93□□□□□ -0.98
SNHG1-216ENST00000541416 MS4A6AQ9H2W1 248 aa8.93□□□□□ -0.98
SNHG1-216ENST00000541416 IFT46Q9NQC8 304 aa8.93□□□□□ -0.98
SNHG1-216ENST00000541416 RRP15Q9Y3B9 282 aaKnown RBP8.93□□□□□ -0.98
SNHG1-216ENST00000541416 DNAH17Q9UFH2 4485 aa8.93□□□□□ -0.98
SNHG1-216ENST00000541416 DYNC1H1Q14204 4646 aaKnown RBP8.92□□□□□ -0.98
SNHG1-216ENST00000541416 IGHV3OR16-13A0A075B7E8 117 aa8.92□□□□□ -0.98
SNHG1-216ENST00000541416 IGHV3-74A0A0B4J1X5 117 aa8.92□□□□□ -0.98
SNHG1-216ENST00000541416 IGHV4-28A0A0C4DH34 117 aa8.92□□□□□ -0.98
SNHG1-216ENST00000541416 A0A1W2PS18 150 aa8.92□□□□□ -0.98
SNHG1-216ENST00000541416 PRSS29PA6NIE9 313 aa8.92□□□□□ -0.98
SNHG1-216ENST00000541416 SCGB2A1O75556 95 aa8.92□□□□□ -0.98
SNHG1-216ENST00000541416 PTHLHP12272 177 aa8.92□□□□□ -0.98
SNHG1-216ENST00000541416 G6PCP35575 357 aa8.92□□□□□ -0.98
SNHG1-216ENST00000541416 LPAR6P43657 344 aa8.92□□□□□ -0.98
SNHG1-216ENST00000541416 NPBWR1P48145 328 aa8.92□□□□□ -0.98
SNHG1-216ENST00000541416 NARS2Q96I59 477 aaKnown RBP8.92□□□□□ -0.98
SNHG1-216ENST00000541416 VCX3BQ9H321 246 aa8.92□□□□□ -0.98
SNHG1-216ENST00000541416 TXNL4BQ9NX01 149 aaKnown RBP8.92□□□□□ -0.98
SNHG1-216ENST00000541416 RABAC1Q9UI14 185 aa8.92□□□□□ -0.98
SNHG1-216ENST00000541416 SSR3Q9UNL2 185 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 199.6 ms